>KCC001990A_C01 KCC001990A_c01
CGCATATTACAGTTCCAATCAACTTCAAATGGCATGCACACCATTTGCGCACCATATTAG
CAGGCAATGTCCTTGCCCCTGCGGTCCCAGCCGTGGGTCCCTTCGTTCACTCCATGCCCA
CGCCTCCTACTGTCTCCTTCCAAGCGATTTAACAAGCACACCATGGCATTATCTTCCCGC
CCATCGTAAGCCACCATAGCCCACCGAGGCGGCAGGCACACGCGTGGCGATTGCGCTACC
TCCTGTGGGTGTGCCTACCGCATTGCACTCAACACCTACTTCGCATGCCACTGTGTTTTT
ACCACATGCGCCGGGCAATTTCTATTTTAGTACAAAACGAAGGTGCTGCGGTGGTGCGGC
GGAGCCGGTGTAAGTTCAAAAGTCCGGCACACGCGCACACGCCGCGGACACCTGTGCCG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001990A_C01 KCC001990A_c01
         (419 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_286685.1| hypothetical protein XP_286685 [Mus musculus]         37  0.064
emb|CAB77685.1| possible 7-TM transporter [Leishmania major]           33  0.71
ref|XP_197475.1| hypothetical protein XP_197475 [Mus musculus]         33  0.71
ref|NP_501354.1| golgi reassembly stacking protein 2, possibly N...    33  0.71
ref|XP_297232.2| similar to extensin (clone Tom J-10) - tomato [...    32  1.6

>ref|XP_286685.1| hypothetical protein XP_286685 [Mus musculus]
          Length = 134

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 33/107 (30%), Positives = 43/107 (39%), Gaps = 2/107 (1%)
 Frame = +2

Query: 50  HHISRQCPCPCGPSRGSLRSLHAHASYCLLPSDLTSTPWHYLPAHRKPP*PTEAAGTRVA 229
           H  S++ P    P  G L+    H S   L +          P H  P  P+ AAG+R  
Sbjct: 12  HSSSKKHPWDEAPRAGHLQGTPTHHSQAELQA----------PGHTHPSQPSRAAGSR-- 59

Query: 230 IALPPVGVPTA--LHSTPTSHATVFLPHAPGNFYFSTKRRCCGGAAE 364
            A PP+    +  L  TPT H    L  APG+ + S   R  G   E
Sbjct: 60  -AHPPITAKQSCRLQGTPTHHCQAEL-QAPGHTHPSQPSRAAGWLQE 104

>emb|CAB77685.1| possible 7-TM transporter [Leishmania major]
          Length = 774

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
 Frame = +2

Query: 11  SSNQLQMACTPFAHHISRQCPCPCGPSRGSL---RSLHAHASYCLLPSDLTSTPWHYLPA 181
           ++NQ  ++C      + +  P P  PS GSL   R  H  +    L    +S+       
Sbjct: 23  TTNQSFLSCVENDLDLPQDRPAPGSPSEGSLDRRRKAHRRSFLSTLGDAASSSR------ 76

Query: 182 HRKPP*PTEAAGTRVAIALPPVGVPTALHSTPTSHATVFLPHAP 313
                    + GT   + +  VG+P++     +SHATV  P  P
Sbjct: 77  -------VRSLGTADYVVMTDVGMPSSQSGPRSSHATVLQPSLP 113

>ref|XP_197475.1| hypothetical protein XP_197475 [Mus musculus]
          Length = 390

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 18/57 (31%), Positives = 28/57 (48%), Gaps = 4/57 (7%)
 Frame = +1

Query: 22  TSNGMHTICAPY*QAMSLPLRSQPWVPSFTPCPRLLLSP----SKRFNKHTMALSSR 180
           T  G+ T+   Y + M++P+  +PW  +F       L+P    S R   H +ALS R
Sbjct: 183 TMTGLETVVVVYSKVMTVPVPGKPWQQTFFVLGEETLAPKWMTSARLTTHPVALSQR 239

>ref|NP_501354.1| golgi reassembly stacking protein 2, possibly N-myristoylated (53.7
           kD) (4I879) [Caenorhabditis elegans]
           gi|7331876|gb|AAF60564.1| Hypothetical protein Y42H9AR.1
           [Caenorhabditis elegans]
          Length = 506

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +2

Query: 143 SDLTSTPWHYLPAHRKPP*PTEAAGTRVAIALPPVGVPTALHSTPTSHATVFLPHAPGNF 322
           S  +++  +  P +  P  PT+   + V  A+PP+   T+  + PTS+     P AP NF
Sbjct: 401 STASNSSGYQAPYYSPPSYPTQQQSSYVPSAVPPMFSATSAPTPPTSYVNPIPPPAPLNF 460

>ref|XP_297232.2| similar to extensin (clone Tom J-10) - tomato [Homo sapiens]
          Length = 908

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 21/64 (32%), Positives = 27/64 (41%), Gaps = 3/64 (4%)
 Frame = +3

Query: 39  HHLRTILAGNVLAPAVPAVGPFVHSMPTPPTVSFQAI*QAHHGIIFPPIVSHH---SPPR 209
           HHL  ++  +  AP  P      H    PPT +       HHG   PP  +HH   +PP 
Sbjct: 380 HHLHLLINHHGSAP--PPTSAHHHGSAPPPTSAH------HHGSAPPPTSAHHHGSAPPP 431

Query: 210 RQAH 221
             AH
Sbjct: 432 TSAH 435

EST assemble image

clone accession position 1 LCL089h04_r AV631176 1 340 2 MXL046a05_r BP095699 27 562 3 HC040h01_r AV635015 42 461 4 HC067c10_r AV637006 42 469

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