>KCC001978A_C01 KCC001978A_c01
gagagaactagtctcgagttttttttttttttttttaatggattgaatggttaaaaattg
caagacgagcctgaattactTTGTTGATTGAATTCATATTACATTACTGTGTATGGTAAA
ACGATAGTATAGACGCAGGAGGCAGGCGCATCACCCCCAACCGGTTGACGCATTTGGCGA
GCGATACCGTAATAAAAGCGGACGACTTGACGCGTGCAGTCTAGAACCTTCTTATGTTGT
CGCAATTGCCCCAACGGAGTGCACAGCCGGCGACCACCGCGCGAGGCAGCCATGCCGCCC
CTAGTAGCGTTGCATGGAGGGGAGCAGCCAGCGCCGGGGGTATGCGGCCTCTCAGCCGGC
GAGGCTGCAGGCTTGGACCCGTGCACACAGCAGCGGCAACCTCTGACGCCAGCGCGCCCA
CACCTGCGCCCGCGCCGGACATGACACTAGAACCTTTCAAGTCGCTTGTGGCTGGCCGCC
GCTTCAGCTGCACCATGTGCGGCAAGTGCTGCACCGGGGACGGCGAGATATGGCTGGCTC
CCGAGGAGATCCCGCGCATTGCCAAGCACCTCAAACTGTCGACGCAGCGCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001978A_C01 KCC001978A_c01
         (591 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00130881.1| COG0727: Predicted Fe-S-cluster oxidoreductas...    43  0.004
ref|NP_616330.1| conserved hypothetical protein [Methanosarcina ...    41  0.011
ref|NP_865417.1| conserved hypothetical protein [Pirellula sp.] ...    41  0.014
dbj|BAB20637.1| P0475H04.3 [Oryza sativa (japonica cultivar-grou...    40  0.032
ref|NP_634398.1| conserved protein [Methanosarcina mazei Goe1] g...    39  0.041

>ref|ZP_00130881.1| COG0727: Predicted Fe-S-cluster oxidoreductase [Desulfovibrio
           desulfuricans G20]
          Length = 253

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 483 FSCTMCGKCCTGDGEIWLAPEEIPRIAKHLKLSTQ 587
           F C MCG CC G G I + P+++ RI  HL L+ Q
Sbjct: 94  FDCKMCGHCCLGKGGIVVGPKDLARICAHLGLTPQ 128

>ref|NP_616330.1| conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A] gi|19915250|gb|AAM04810.1| conserved hypothetical
           protein [Methanosarcina acetivorans str. C2A]
          Length = 286

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 21/47 (44%), Positives = 24/47 (50%), Gaps = 3/47 (6%)
 Frame = +3

Query: 450 EPFKSLVAGRRFSCTMCGKCCT---GDGEIWLAPEEIPRIAKHLKLS 581
           E   S +    FSC  CGKCC    GD  + L P EI +I KH  LS
Sbjct: 48  EKLASEIEKTGFSCQYCGKCCQRAFGDNRVVLTPSEIEKIQKHTGLS 94

>ref|NP_865417.1| conserved hypothetical protein [Pirellula sp.]
           gi|32443659|emb|CAD73101.1| conserved hypothetical
           protein [Pirellula sp.]
          Length = 149

 Score = 40.8 bits (94), Expect = 0.014
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +3

Query: 474 GRRFSCTMCGKCCTGD-GEIWLAPEEIPRIAKHLKL 578
           G RF CT CG+CC+G+ G +++   EI  +AK +KL
Sbjct: 21  GLRFECTQCGECCSGEPGYVFVDENEIADLAKEMKL 56

>dbj|BAB20637.1| P0475H04.3 [Oryza sativa (japonica cultivar-group)]
           gi|21104572|dbj|BAB93166.1| B1146F03.21 [Oryza sativa
           (japonica cultivar-group)]
          Length = 282

 Score = 39.7 bits (91), Expect = 0.032
 Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
 Frame = +1

Query: 205 T*RVQSRTFLCCRNCPNGVHSRRPPREAAMPPLVALHGGEQPAPGVCGLSAGEAAGLDPC 384
           T R   RT L     P G  +RRP REA  PP +  H  + P P   G+ A EAA     
Sbjct: 18  TTRANKRTPLAPPLPPRGASTRRPRREA--PPPLPRH--QPPRPRGRGMEAAEAAAGSSH 73

Query: 385 TQQRQPLTPARPH---LRPRRT*H*NLSSRLWLAAASAAPCAASAAP---GTARYGWLPR 546
             +      AR      R RR  H    S   + AA+    +A+  P    + RY  L  
Sbjct: 74  AHREHIGDGARSRRRGRRKRRRRHTKEESAAQIDAAAQQEESAAVGPRSCSSGRYSLL-- 131

Query: 547 RSRALPSTSNCRRSA 591
               LPS + CR SA
Sbjct: 132 --SCLPSAATCRSSA 144

>ref|NP_634398.1| conserved protein [Methanosarcina mazei Goe1]
           gi|20906958|gb|AAM32070.1| conserved protein
           [Methanosarcina mazei Goe1]
          Length = 280

 Score = 39.3 bits (90), Expect = 0.041
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = +3

Query: 483 FSCTMCGKCCT---GDGEIWLAPEEIPRIAKHLKLS 581
           FSC  CGKCC    GD  + L P+EI +I K+  LS
Sbjct: 58  FSCQNCGKCCKRAFGDNRVVLTPQEIEKIQKYTDLS 93

EST assemble image

clone accession position 1 LC021c12_r AV620377 1 284 2 HC039a01_r AV634864 116 591

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