Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001976A_C01 KCC001976A_c01
(527 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P39881|CUT1_CANFA CCAAT displacement protein (Homeobox protei... 37 0.16
gb|AAK81660.1| unknown [Burkholderia cepacia] 35 0.46
ref|ZP_00007297.1| COG1469: Uncharacterized conserved protein [R... 35 0.78
gb|AAB62575.1| short form of CHIP [Drosophila melanogaster] 34 1.0
ref|ZP_00092426.1| COG0022: Pyruvate/2-oxoglutarate dehydrogenas... 33 2.3
>sp|P39881|CUT1_CANFA CCAAT displacement protein (Homeobox protein Clox) (Clox-1)
gi|423173|pir||S33121 homeotic protein CDP - dog
(fragment) gi|2202|emb|CAA48782.1| Clox [Canis sp.]
Length = 975
Score = 37.0 bits (84), Expect = 0.16
Identities = 22/49 (44%), Positives = 26/49 (52%), Gaps = 1/49 (2%)
Frame = -2
Query: 157 PPALSSSRLHGRGHWPRRRA*T-PSARAPSRPARAARGSAARPGVRHRP 14
P S R G G P RR P+ AP+ PA AARG + RPG R +P
Sbjct: 823 PAEKRSRRPRGPGPGPGRRGGGGPAPGAPAAPAAAARGPSRRPGARAKP 871
>gb|AAK81660.1| unknown [Burkholderia cepacia]
Length = 334
Score = 35.4 bits (80), Expect = 0.46
Identities = 21/46 (45%), Positives = 25/46 (53%), Gaps = 10/46 (21%)
Frame = +3
Query: 6 PPQGRCRTPGRAAEP---------RAARAGREG-ARALGVQARRRG 113
PP GR TP R +EP + RAGR+G R LG + RRRG
Sbjct: 150 PPVGRTGTPSRQSEPVPEDALPAVQGIRAGRQGLVRGLGARHRRRG 195
>ref|ZP_00007297.1| COG1469: Uncharacterized conserved protein [Rhodobacter
sphaeroides]
Length = 646
Score = 34.7 bits (78), Expect = 0.78
Identities = 21/44 (47%), Positives = 23/44 (51%)
Frame = -2
Query: 160 APPALSSSRLHGRGHWPRRRA*TPSARAPSRPARAARGSAARPG 29
A PAL HGR PR R PSA P P+RA + AAR G
Sbjct: 119 ARPALPRDGRHGREDRPRARG--PSAARPRDPSRAGKPPAARDG 160
>gb|AAB62575.1| short form of CHIP [Drosophila melanogaster]
Length = 182
Score = 34.3 bits (77), Expect = 1.0
Identities = 21/46 (45%), Positives = 25/46 (53%)
Frame = -2
Query: 151 ALSSSRLHGRGHWPRRRA*TPSARAPSRPARAARGSAARPGVRHRP 14
A+S +L G P R SA + RPARA R + ARPG HRP
Sbjct: 116 AISMVQLAG----PSARHPRDSASSAGRPARALRLTVARPGTSHRP 157
>ref|ZP_00092426.1| COG0022: Pyruvate/2-oxoglutarate dehydrogenase complex,
dehydrogenase (E1) component, eukaryotic type, beta
subunit [Azotobacter vinelandii]
Length = 397
Score = 33.1 bits (74), Expect = 2.3
Identities = 31/97 (31%), Positives = 37/97 (37%)
Frame = +3
Query: 6 PPQGRCRTPGRAAEPRAARAGREGARALGVQARRRGQCPRPCSREEESAGGANYGCS*NR 185
P QGR G E R R AR G A RRG PRP R GG + GC R
Sbjct: 2 PRQGR---GGSVEEARTDPHLRRSARGPG--AARRGGPPRPGGR----GGGRSGGCGGLR 52
Query: 186 HGMKEREGNDSCVKIEHTGFMLLCSSNFHHDPRQGAR 296
G + G + G + ++ RQG R
Sbjct: 53 RGRQPGAGRGPAARCLRLGLDPMSRVSYREALRQGLR 89