Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001966A_C01 KCC001966A_c01
(536 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566333.1| elongation factor P (EF-P) -related [Arabidopsi... 145 3e-34
ref|NP_896128.1| Translation elongation factor EF-P [Synechococc... 144 1e-33
sp|Q54760|EFP_SYNP7 Elongation factor P (EF-P) gi|7469237|pir||T... 142 3e-33
ref|NP_682084.1| translation elongation factor EF-P [Thermosynec... 142 3e-33
ref|NP_892147.1| Elongation factor P (EF-P) [Prochlorococcus mar... 141 5e-33
>ref|NP_566333.1| elongation factor P (EF-P) -related [Arabidopsis thaliana]
gi|17380806|gb|AAL36090.1| putative elongation factor P
(EF-P) [Arabidopsis thaliana] gi|21436359|gb|AAM51349.1|
putative elongation factor P (EF-P) [Arabidopsis
thaliana] gi|21592331|gb|AAM64282.1| putative elongation
factor P (EF-P) [Arabidopsis thaliana]
Length = 236
Score = 145 bits (367), Expect = 3e-34
Identities = 72/152 (47%), Positives = 102/152 (66%), Gaps = 3/152 (1%)
Frame = +1
Query: 88 AAPRPQIRSRNVRLVVVNGTVSTNDFKNGLTVEIDSAPYKVIEFLHVKPGKGAAFVRSKL 267
A P +I R R ++ ++S ND K G +E+D AP++V+EFLHVKPGKGAAFVR+K+
Sbjct: 33 ALPAVRISPRTNRFPRIHCSMSANDIKAGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKI 92
Query: 268 KNFLTGGVVEKTFRAGEQVNTADVQKREGQFTYLEGEEYVFMDTESYEETRLKKDDWAQ- 444
+N++ G VE+TFRAG V A++ K QFTY +G ++VFMD +YEETRL + D +
Sbjct: 93 RNYVNGSTVERTFRAGISVEEANIYKETKQFTYKDGSQFVFMDLTTYEETRLNESDMGEK 152
Query: 445 --FLKEGTTVELLFYNGKVISVDVPQFMDLKI 534
+LKEG LL++ KVI D+P + LK+
Sbjct: 153 TKWLKEGMDCILLYWKDKVIDFDLPITVKLKV 184
>ref|NP_896128.1| Translation elongation factor EF-P [Synechococcus sp. WH 8102]
gi|33632092|emb|CAE06548.1| Translation elongation
factor EF-P [Synechococcus sp. WH 8102]
Length = 187
Score = 144 bits (362), Expect = 1e-33
Identities = 72/132 (54%), Positives = 97/132 (72%), Gaps = 3/132 (2%)
Frame = +1
Query: 148 VSTNDFKNGLTVEIDSAPYKVIEFLHVKPGKGAAFVRSKLKNFLTGGVVEKTFRAGEQVN 327
+S+NDF+ G T+EID A ++V+EFLHVKPGKG+AFVRSKLK TG VVEKTFRAGE +
Sbjct: 2 ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRSKLKAVKTGNVVEKTFRAGEMLP 61
Query: 328 TADVQKREGQFTYLEGEEYVFMDTESYEETRLKKD---DWAQFLKEGTTVELLFYNGKVI 498
A ++K Q TY+EGE+YVFMD +YEETRL D + ++LKEG V ++ +NG +
Sbjct: 62 QALLEKASLQHTYMEGEDYVFMDMSTYEETRLSADQIGESRKYLKEGMEVNVVSWNGSPL 121
Query: 499 SVDVPQFMDLKI 534
V++P + L+I
Sbjct: 122 EVELPNSVVLEI 133
>sp|Q54760|EFP_SYNP7 Elongation factor P (EF-P) gi|7469237|pir||T30278 translation
elongation factor EF-P - Synechococcus sp. (PCC 7942)
gi|1399829|gb|AAB82025.1| elongation factor P
[Synechococcus sp. PCC 7942]
Length = 185
Score = 142 bits (358), Expect = 3e-33
Identities = 70/132 (53%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Frame = +1
Query: 148 VSTNDFKNGLTVEIDSAPYKVIEFLHVKPGKGAAFVRSKLKNFLTGGVVEKTFRAGEQVN 327
+S+NDF+ G T+EID A ++V+EFLHVKPGKG+AFVR+KLKN TG VVEKTFRAGE V
Sbjct: 2 ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61
Query: 328 TADVQKREGQFTYLEGEEYVFMDTESYEETRLKK---DDWAQFLKEGTTVELLFYNGKVI 498
A ++K Q+TY +G+++VFMD E+YEE RL D ++LKEG ++ +NG+VI
Sbjct: 62 QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121
Query: 499 SVDVPQFMDLKI 534
V++P + L++
Sbjct: 122 EVELPNSVVLEV 133
>ref|NP_682084.1| translation elongation factor EF-P [Thermosynechococcus elongatus
BP-1] gi|31563043|sp|Q8DJD3|EFP_SYNEL Elongation factor
P (EF-P) gi|22295018|dbj|BAC08846.1| translation
elongation factor EF-P [Thermosynechococcus elongatus
BP-1]
Length = 185
Score = 142 bits (358), Expect = 3e-33
Identities = 69/132 (52%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Frame = +1
Query: 148 VSTNDFKNGLTVEIDSAPYKVIEFLHVKPGKGAAFVRSKLKNFLTGGVVEKTFRAGEQVN 327
+S+NDF+ G+++E+D A ++V+EFLHVKPGKG+AFVR+KLKN TG V+E+TFRAGE V
Sbjct: 2 ISSNDFRPGVSIELDGAVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVIERTFRAGETVP 61
Query: 328 TADVQKREGQFTYLEGEEYVFMDTESYEETRL---KKDDWAQFLKEGTTVELLFYNGKVI 498
A ++KR Q TY +GE+YVFMD ESYEE RL + D A++LKEG V ++ + +V+
Sbjct: 62 QATLEKRTMQHTYKDGEDYVFMDMESYEEARLTPAQVGDRAKYLKEGMEVNIVKWGEQVL 121
Query: 499 SVDVPQFMDLKI 534
V++P + L++
Sbjct: 122 EVELPNSVVLEV 133
>ref|NP_892147.1| Elongation factor P (EF-P) [Prochlorococcus marinus subsp. pastoris
str. CCMP1378] gi|33633528|emb|CAE18485.1| Elongation
factor P (EF-P) [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 186
Score = 141 bits (356), Expect = 5e-33
Identities = 70/132 (53%), Positives = 95/132 (71%), Gaps = 3/132 (2%)
Frame = +1
Query: 148 VSTNDFKNGLTVEIDSAPYKVIEFLHVKPGKGAAFVRSKLKNFLTGGVVEKTFRAGEQVN 327
+S+NDF+ G T+EID ++V+EFLHVKPGKG+AFVR+KLK+ G VVEKTFRAGE V
Sbjct: 2 ISSNDFRTGTTIEIDGQVWRVVEFLHVKPGKGSAFVRTKLKSVRNGNVVEKTFRAGESVQ 61
Query: 328 TADVQKREGQFTYLEGEEYVFMDTESYEETRLKKDD---WAQFLKEGTTVELLFYNGKVI 498
A ++K Q TY+E +YVFMD S+EETRL D +++LKEG V ++FY KV+
Sbjct: 62 QAVLEKSNLQHTYVESGDYVFMDMISFEETRLSSDQIGRGSKYLKEGMEVNVIFYKDKVL 121
Query: 499 SVDVPQFMDLKI 534
V++P + LK+
Sbjct: 122 EVELPISITLKV 133
