Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001960A_C01 KCC001960A_c01
(730 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA30030.1| cytoskeletal actin gene 247 e-113
ref|XP_138853.1| RIKEN cDNA 4732495G21 gene [Mus musculus] gi|30... 236 e-111
ref|XP_293924.1| similar to cytoplasmic beta-actin [Homo sapiens] 237 e-110
sp|Q9URS0|ACTG_PENCH Actin, gamma gi|6002484|gb|AAF00007.1|AF056... 247 e-110
sp|P17299|ACT3_ORYSA ACTIN 3 gi|71635|pir||ATRZ3 actin 3 - rice ... 242 e-110
>gb|AAA30030.1| cytoskeletal actin gene
Length = 376
Score = 247 bits (631), Expect(2) = e-113
Identities = 117/128 (91%), Positives = 123/128 (95%)
Frame = +3
Query: 57 EGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 236
+ +V+ALV DNGSGMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 237 RGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQ 416
RGILTL+YPIEHGIVTNWDDMEKIWHHTF+NELRVAPEEHPVLLTEAP NPKANREKMT
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPXNPKANREKMTX 122
Query: 417 IMFETFNA 440
IMFETFN+
Sbjct: 123 IMFETFNS 130
Score = 182 bits (463), Expect(2) = e-113
Identities = 91/96 (94%), Positives = 93/96 (96%)
Frame = +1
Query: 442 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 621
PAMYVAIQAVLSL ASGRTTGIV DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLXASGRTTGIVFDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYL 190
Query: 622 MKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 729
MKIL ERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>ref|XP_138853.1| RIKEN cDNA 4732495G21 gene [Mus musculus]
gi|30425250|ref|NP_780706.1| RIKEN cDNA 4732495G21 gene
[Mus musculus] gi|26325098|dbj|BAC26303.1| unnamed
protein product [Mus musculus]
gi|26325118|dbj|BAC26313.1| unnamed protein product [Mus
musculus]
Length = 376
Score = 236 bits (603), Expect(2) = e-111
Identities = 109/127 (85%), Positives = 119/127 (92%)
Frame = +3
Query: 57 EGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 236
+ E++ALV DNGSGM KAGF GDDAPRAVFPS+VGRPRH GVMVGMGQKD YVGDEAQSK
Sbjct: 3 DDELTALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62
Query: 237 RGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQ 416
RGILTL+YPIEHG+VTNWDDMEKIW+HTF+NELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63 RGILTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122
Query: 417 IMFETFN 437
IMFE FN
Sbjct: 123 IMFEAFN 129
Score = 187 bits (475), Expect(2) = e-111
Identities = 92/96 (95%), Positives = 95/96 (98%)
Frame = +1
Query: 442 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 621
PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 622 MKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 729
MKIL ERGY+FTTTAEREIVRD+KEKLCYVALDFEQ
Sbjct: 191 MKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQ 226
>ref|XP_293924.1| similar to cytoplasmic beta-actin [Homo sapiens]
Length = 376
Score = 237 bits (605), Expect(2) = e-110
Identities = 108/127 (85%), Positives = 119/127 (93%)
Frame = +3
Query: 57 EGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 236
+ E+SALV DNGSGM KAGF GDDAPRAVFPS++GRPRH GVMVGMGQKD YVGDEAQSK
Sbjct: 3 DNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSK 62
Query: 237 RGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQ 416
RG+LTL+YPIEHG+VTNWDDMEKIW+HTF+NELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63 RGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122
Query: 417 IMFETFN 437
IMFE FN
Sbjct: 123 IMFEAFN 129
Score = 185 bits (469), Expect(2) = e-110
Identities = 91/96 (94%), Positives = 94/96 (97%)
Frame = +1
Query: 442 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 621
PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 622 MKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 729
MKIL ERGY+FTTTAEREIVRD+KEKLCYVALDFEQ
Sbjct: 191 MKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQ 226
>sp|Q9URS0|ACTG_PENCH Actin, gamma gi|6002484|gb|AAF00007.1|AF056975_1 gamma-actin
[Penicillium chrysogenum]
Length = 375
Score = 247 bits (631), Expect(2) = e-110
Identities = 115/128 (89%), Positives = 123/128 (95%)
Frame = +3
Query: 57 EGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 236
E EV+ALV DNGSGM KAGFAGDDAPRAVFPSIVGRPRH G+M+GMGQKDSYVGDEAQSK
Sbjct: 2 EEEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIGMGQKDSYVGDEAQSK 61
Query: 237 RGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQ 416
RGILTLRYPIEHG+VTNWDDMEKIWHHTF+NELRVAPEEHP+LLTEAP+NPK NREKMTQ
Sbjct: 62 RGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPINPKFNREKMTQ 121
Query: 417 IMFETFNA 440
I+FETFNA
Sbjct: 122 IVFETFNA 129
Score = 175 bits (443), Expect(2) = e-110
Identities = 85/96 (88%), Positives = 92/96 (95%)
Frame = +1
Query: 442 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 621
PA YV+IQAVLSLYASGRTTGIVLDSGDGVTH VPIYEG++LPHAI R+D+AGRDLTDYL
Sbjct: 130 PAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRDLTDYL 189
Query: 622 MKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 729
MKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 190 MKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQ 225
>sp|P17299|ACT3_ORYSA ACTIN 3 gi|71635|pir||ATRZ3 actin 3 - rice gi|20331|emb|CAA33871.1|
actin [Oryza sativa]
Length = 376
Score = 242 bits (618), Expect(2) = e-110
Identities = 113/131 (86%), Positives = 122/131 (92%)
Frame = +3
Query: 48 MADEGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEA 227
MAD + LVCDNG+GMVKAGFAGDDAPRAVFPSIVG+PRHTGVMVGMGQKD+YVGDEA
Sbjct: 1 MADGEMIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGQPRHTGVMVGMGQKDAYVGDEA 60
Query: 228 QSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREK 407
QSKRGILTL+YPIEHG+ NWDDMEKIWHHTF+NELRV PEEHP+LLTEAPLN +ANREK
Sbjct: 61 QSKRGILTLKYPIEHGMWNNWDDMEKIWHHTFYNELRVLPEEHPILLTEAPLNQRANREK 120
Query: 408 MTQIMFETFNA 440
MTQIMFETFNA
Sbjct: 121 MTQIMFETFNA 131
Score = 177 bits (450), Expect(2) = e-110
Identities = 89/96 (92%), Positives = 92/96 (95%)
Frame = +1
Query: 442 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 621
PAMYVAIQAVLSLYASGRTTG+VLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGMVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCL 191
Query: 622 MKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 729
MKIL ERGYSFTTTAERE VRDIKEKL Y+ALD+EQ
Sbjct: 192 MKILTERGYSFTTTAERESVRDIKEKLAYIALDYEQ 227
