Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001952A_C01 KCC001952A_c01
(489 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00024118.1| COG0624: Acetylornithine deacetylase/Succinyl... 39 0.026
emb|CAC85089.1| CXCR2 like protein [Xenopus laevis] 36 0.29
gb|AAL04459.1|AF338146_1 NADH dehydrogenase subunit 1 [Dendropom... 34 0.83
gb|EAA38695.1| GLP_516_37403_36090 [Giardia lamblia ATCC 50803] 33 1.4
ref|NP_038229.1| NADH dehydrogenase subunit 1 [Pupa strigosa] gi... 33 1.4
>ref|ZP_00024118.1| COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate
desuccinylase and related deacylases [Ralstonia
metallidurans]
Length = 531
Score = 39.3 bits (90), Expect = 0.026
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Frame = +1
Query: 289 SSSAARCRIPRKTLPQ*C----SSSWACSTSLRRFW-----ASGAATTRSVCC------* 423
++S +RCR + L C + S C+T++RR W ++ +TTRS CC
Sbjct: 7 TTSISRCRTAQAMLDS-CRRWTARSMRCATTVRRRWCWRLASTRTSTTRSACCRWGWKPI 65
Query: 424 ASWRAVASPFCCKLRWCWR 480
+W +V++ + C+ WC R
Sbjct: 66 GAWASVSTRWACRRWWCRR 84
>emb|CAC85089.1| CXCR2 like protein [Xenopus laevis]
Length = 353
Score = 35.8 bits (81), Expect = 0.29
Identities = 22/86 (25%), Positives = 40/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 237 IIMRIAVFFSAVIG---VAYIIFGCKVQNPPKDFAPVMFVILGVLNIFASLLGFWGSYHK 407
+++ VFF V+G V +I+ K++ D + I +L FA+ L FW +Y
Sbjct: 42 VVVYALVFFLNVVGNSLVVLVIYNNKLKRSSTDVYLLHLAIADLL--FATTLPFWAAYKA 99
Query: 408 KRVLLGFLACGGFSILLQIALVLALL 485
+ + G C S+L ++ +L
Sbjct: 100 SQWVFGIFMCKAVSVLQEVNFYSGIL 125
>gb|AAL04459.1|AF338146_1 NADH dehydrogenase subunit 1 [Dendropoma maxima]
Length = 310
Score = 34.3 bits (77), Expect = 0.83
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 336 VMFVILGVLNIFASLLGFWGSYHKKRVLLGFLACGGFSILLQIALVLALLF 488
+ F+ + LN++ +LL W S + K LLG L +I ++++VL LLF
Sbjct: 104 LFFLCVSALNVYGTLLAGWSS-NSKYALLGCLRAVAQTISYEVSMVLILLF 153
>gb|EAA38695.1| GLP_516_37403_36090 [Giardia lamblia ATCC 50803]
Length = 437
Score = 33.5 bits (75), Expect = 1.4
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -3
Query: 469 SAICSRMEKPPHARKPSNTRFLW*LPQKPRSDAKMLST 356
SA C+ +EKPP R PSNT LW +DA +L+T
Sbjct: 245 SANCTDIEKPPTVRFPSNTSDLW-------NDANVLTT 275
>ref|NP_038229.1| NADH dehydrogenase subunit 1 [Pupa strigosa]
gi|6683073|dbj|BAA89018.1| TAA stop codon is completed
by the addition of 3' A residues to the mRNA [Pupa
strigosa]
Length = 302
Score = 33.5 bits (75), Expect = 1.4
Identities = 23/109 (21%), Positives = 51/109 (46%)
Frame = +3
Query: 162 FLLSRVLLQSSGAG*KMVSCAKASGIIMRIAVFFSAVIGVAYIIFGCKVQNPPKDFAPVM 341
F+ +++ SS ++ A + + + + + + V Y+ +G ++
Sbjct: 58 FVKEKIVPLSSNVLSLFIAPALSLTLALSLWFMYPSAFSVKYLTWGL-----------LL 106
Query: 342 FVILGVLNIFASLLGFWGSYHKKRVLLGFLACGGFSILLQIALVLALLF 488
F + LN++++LL W S + K LG L +I +++L+L +LF
Sbjct: 107 FFCITALNVYSTLLAGWAS-NSKYAFLGALRAAAQTISYEVSLLLIILF 154
