Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001951A_C01 KCC001951A_c01
(483 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567281.2| contains similarity to S. cerevisiae vacuolar p... 93 2e-18
sp|Q9S9T7|V281_ARATH VPS28 protein homolog 1 gi|25353912|pir||H8... 93 2e-18
ref|NP_193887.1| expressed protein [Arabidopsis thaliana] gi|306... 91 7e-18
dbj|BAB63580.1| putative vacuolar protein sorting-associated pro... 75 4e-13
ref|NP_652053.1| CG12770-PA [Drosophila melanogaster] gi|1312462... 66 2e-10
>ref|NP_567281.2| contains similarity to S. cerevisiae vacuolar protein
sorting-associtaed protein VPS28 (GB:U39205)
[Arabidopsis thaliana]
Length = 210
Score = 92.8 bits (229), Expect = 2e-18
Identities = 39/71 (54%), Positives = 58/71 (80%)
Frame = +1
Query: 256 EIKLWSNKKDQAQYESYADLYAIIKTTEKLERAFVRDAINAEQYEEACGRLIGQFKVLWA 435
E+KLW++K+++ YE++A+L+AIIK TEKLE+A++RD IN +YE C +LI FK L A
Sbjct: 3 EVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSA 62
Query: 436 SMKDTVPNVEK 468
++KDTVPN+E+
Sbjct: 63 TLKDTVPNIER 73
>sp|Q9S9T7|V281_ARATH VPS28 protein homolog 1 gi|25353912|pir||H85062 hypothetical
protein AT4g05000 [imported] - Arabidopsis thaliana
gi|5732073|gb|AAD48972.1|AF162444_4 contains similarity
to S. cerevisiae vacuolar protein sorting-associated
protein VPS28 (GB:U39205) [Arabidopsis thaliana]
gi|7267259|emb|CAB81042.1| AT4g05000 [Arabidopsis
thaliana]
Length = 209
Score = 92.8 bits (229), Expect = 2e-18
Identities = 39/71 (54%), Positives = 58/71 (80%)
Frame = +1
Query: 256 EIKLWSNKKDQAQYESYADLYAIIKTTEKLERAFVRDAINAEQYEEACGRLIGQFKVLWA 435
E+KLW++K+++ YE++A+L+AIIK TEKLE+A++RD IN +YE C +LI FK L A
Sbjct: 2 EVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSA 61
Query: 436 SMKDTVPNVEK 468
++KDTVPN+E+
Sbjct: 62 TLKDTVPNIER 72
>ref|NP_193887.1| expressed protein [Arabidopsis thaliana]
gi|30685488|ref|NP_849417.1| expressed protein
[Arabidopsis thaliana] gi|13124598|sp|O65421|V282_ARATH
VPS28 protein homolog 2 gi|7485715|pir||T05164
hypothetical protein F18E5.180 - Arabidopsis thaliana
gi|3080400|emb|CAA18720.1| putative protein [Arabidopsis
thaliana] gi|4455264|emb|CAB36800.1| putative protein
[Arabidopsis thaliana] gi|7268953|emb|CAB81263.1|
putative protein [Arabidopsis thaliana]
gi|22531273|gb|AAM97140.1| putative protein [Arabidopsis
thaliana] gi|30023672|gb|AAP13369.1| At4g21560
[Arabidopsis thaliana]
Length = 209
Score = 90.9 bits (224), Expect = 7e-18
Identities = 39/71 (54%), Positives = 57/71 (79%)
Frame = +1
Query: 256 EIKLWSNKKDQAQYESYADLYAIIKTTEKLERAFVRDAINAEQYEEACGRLIGQFKVLWA 435
E+KLW++K+++ YE++A+LYAIIK TEKLE+A++RD I+ +YE C +LI FK L A
Sbjct: 2 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSA 61
Query: 436 SMKDTVPNVEK 468
S+KD VPN+E+
Sbjct: 62 SLKDMVPNIER 72
>dbj|BAB63580.1| putative vacuolar protein sorting-associated protein [Oryza sativa
(japonica cultivar-group)] gi|20804845|dbj|BAB92527.1|
putative vacuolar protein sorting-associated protein
[Oryza sativa (japonica cultivar-group)]
Length = 213
Score = 75.1 bits (183), Expect = 4e-13
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 256 EIKLWSNKKDQAQYESYADLYAIIKTTEKLERAFVRDAINAEQYEEACGRLIGQFKVLWA 435
E+KLW++K+++ ES ADLYAIIK TEKLERA+VRD ++A YE C +LI QF L +
Sbjct: 2 EVKLWNDKRERELLESLADLYAIIKATEKLERAYVRDLVSAADYEAECLKLISQFNSLSS 61
Query: 436 SMKDTV 453
S+ V
Sbjct: 62 SLAGVV 67
>ref|NP_652053.1| CG12770-PA [Drosophila melanogaster]
gi|13124624|sp|Q9V359|VP28_DROME VPS28 protein homolog
gi|7304105|gb|AAF59143.1| CG12770-PA [Drosophila
melanogaster] gi|16767900|gb|AAL28168.1| GH04443p
[Drosophila melanogaster]
Length = 210
Score = 66.2 bits (160), Expect = 2e-10
Identities = 29/71 (40%), Positives = 51/71 (70%), Gaps = 1/71 (1%)
Frame = +1
Query: 256 EIKLWSNKKDQAQYESYADLYAIIKTTEKLERAFVRDAINAEQYEEACGRLIGQFKVLWA 435
E+KL+ N +++ +Y++ ADLYAII T ++LE+A++RD I ++Y AC + + Q+KV +
Sbjct: 11 EVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFK 70
Query: 436 SMK-DTVPNVE 465
++ D P+VE
Sbjct: 71 QVQCDEFPSVE 81
