Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001943A_C01 KCC001943A_c01
(681 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_031703.1| pregnancy specific glycoprotein 17; carcinoembr... 38 0.12
ref|ZP_00130058.1| COG1957: Inosine-uridine nucleoside N-ribohyd... 34 1.8
emb|CAD40824.1| OSJNBa0006B20.17 [Oryza sativa (japonica cultiva... 33 4.0
ref|ZP_00100291.1| COG0502: Biotin synthase and related enzymes ... 33 4.0
ref|NP_353174.1| AGR_C_221p [Agrobacterium tumefaciens] gi|25349... 33 5.2
>ref|NP_031703.1| pregnancy specific glycoprotein 17; carcinoembryonic antigen 2 [Mus
musculus] gi|2118918|pir||I76668 pregnancy-specific
glycoprotein - mouse gi|200317|gb|AAA39916.1|
pregnancy-specific glycoprotein
Length = 475
Score = 38.1 bits (87), Expect = 0.12
Identities = 25/76 (32%), Positives = 40/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 87 RLGSDPLRPHGAGGAVVVLQLRELTNIHLTDMQS*SWVRGRAHSV---IS**RIGVESIT 257
+L DPL PH A G V+LQ+ L D+Q+ SW +G ++ I+ I +SI
Sbjct: 275 QLSIDPLPPHAAEGGRVLLQVHNLPE----DVQTFSWYKGVYSTILFQIAKYSIATKSII 330
Query: 258 CGHMRECHDSLVRNGA 305
G+ R +++ NG+
Sbjct: 331 MGYARSRRETVYTNGS 346
>ref|ZP_00130058.1| COG1957: Inosine-uridine nucleoside N-ribohydrolase [Desulfovibrio
desulfuricans G20]
Length = 362
Score = 34.3 bits (77), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 452 RHANRPACRLLLGIARRHPRDITQVHNSTRANL 354
R A+ PACRL++ RRHP ++ V NL
Sbjct: 134 RQASAPACRLIIETVRRHPHEVVLVMEGALTNL 166
>emb|CAD40824.1| OSJNBa0006B20.17 [Oryza sativa (japonica cultivar-group)]
Length = 230
Score = 33.1 bits (74), Expect = 4.0
Identities = 31/98 (31%), Positives = 36/98 (36%)
Frame = -1
Query: 582 PQSPWIGPHCSTHLLTSKPAPATSHIALSWFDMHLLIRPLHTSAPCKSPCMPSPFRHST* 403
P P P+ HLL PAP W+D P HT AP + P P+
Sbjct: 39 PPPPPPPPYVPPHLLPPSPAPQ------QWYDHPPNYHPPHTPAPAPA---PGPY----- 84
Query: 402 TPP*HHTGAQ*HSSQPPNFLATASRQPSAT*STHHCAP 289
PP HH H PP T + PS T H P
Sbjct: 85 IPP-HHP----HHHHPP----TPAPAPSTTPGGHGGVP 113
>ref|ZP_00100291.1| COG0502: Biotin synthase and related enzymes [Desulfitobacterium
hafniense]
Length = 413
Score = 33.1 bits (74), Expect = 4.0
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 416 LKGDGMQGDLHGAEVCRGLISKCISNQ-LKAIWLVAGAGLEVSKCVLQCGPIH 571
LK G G H + G+I+K + L+ I L A AGL+V C+ GP H
Sbjct: 235 LKKSGFDGIYHAVRLGEGVITKIDPRKRLQTIDLAAKAGLKVGTCLEPVGPEH 287
>ref|NP_353174.1| AGR_C_221p [Agrobacterium tumefaciens] gi|25349738|pir||F97375
surfeit 1 (AF182952) [imported] - Agrobacterium
tumefaciens (strain C58, Cereon)
gi|15155016|gb|AAK85959.1| AGR_C_221p [Agrobacterium
tumefaciens str. C58 (Cereon)]
Length = 291
Score = 32.7 bits (73), Expect = 5.2
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 331 AGSGEEVRRLARVLLCTCVMSRGCLRAMPKRRRHAGRFAWRRGM-QRPDQQVHIEPAQSN 507
A +R A V+L + GCL A+ + R W+ + +R D + H EP +
Sbjct: 43 APQNRRIRPAAIVVLFLTIALTGCLLALGTWQ--VQRLFWKLDLIERVDVRAHAEPVDAP 100
Query: 508 MASSWSGLG 534
AS W LG
Sbjct: 101 AASDWPALG 109
