Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001939A_C01 KCC001939A_c01
(765 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 47 3e-04
gb|AAK43886.1|AF370509_1 protein kinase-like protein [Arabidopsi... 46 6e-04
ref|NP_189098.1| protein kinase -related [Arabidopsis thaliana] ... 46 6e-04
ref|NP_595582.1| putative COPII coat component; WD repeat protei... 45 0.001
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca] 44 0.002
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 47.0 bits (110), Expect = 3e-04
Identities = 31/95 (32%), Positives = 37/95 (38%)
Frame = +3
Query: 468 PASAVAPTSPIPPSRAASLTAPPAPLHPAVPPTATSSSSWTVTCYFSSRLFHPGSASLKP 647
PA+ APT P PP AA APP P PA PT T P P
Sbjct: 142 PAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTP----------------PPPPPAGP 185
Query: 648 QRTSSPSASSTLCPGAPPPTWSSHRASQSLSRTTP 752
+P+ ++T P APPP + R TP
Sbjct: 186 AARPTPAPTATPTPVAPPPAAPTARPGSPAPAATP 220
Score = 35.4 bits (80), Expect = 1.0
Identities = 24/77 (31%), Positives = 31/77 (40%)
Frame = +3
Query: 468 PASAVAPTSPIPPSRAASLTAPPAPLHPAVPPTATSSSSWTVTCYFSSRLFHPGSASLKP 647
P S A SP P + T PAP A PP+ + T PG+A+ P
Sbjct: 261 PGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPA---------PGAATPAP 311
Query: 648 QRTSSPSASSTLCPGAP 698
T +P + T PG P
Sbjct: 312 TATPAPGGALTPPPGRP 328
>gb|AAK43886.1|AF370509_1 protein kinase-like protein [Arabidopsis thaliana]
gi|30725492|gb|AAP37768.1| At3g24600 [Arabidopsis
thaliana]
Length = 652
Score = 46.2 bits (108), Expect = 6e-04
Identities = 33/99 (33%), Positives = 44/99 (44%)
Frame = +3
Query: 456 TRRSPASAVAPTSPIPPSRAASLTAPPAPLHPAVPPTATSSSSWTVTCYFSSRLFHPGSA 635
T SP + +P+ P PP+ + + T PPA P PPT T SS S+ P +
Sbjct: 3 TAPSPGTTPSPSPPSPPTNSTTTTPPPAASSP--PPTTTPSSPPPSP---STNSTSPPPS 57
Query: 636 SLKPQRTSSPSASSTLCPGAPPPTWSSHRASQSLSRTTP 752
S P PS +L P P P+ S+ S TTP
Sbjct: 58 SPLPPSLPPPSPPGSLTPPIPQPSPSAPITPSPPSPTTP 96
>ref|NP_189098.1| protein kinase -related [Arabidopsis thaliana]
gi|9294050|dbj|BAB02007.1| protein kinase-like protein
[Arabidopsis thaliana] gi|15983765|gb|AAL10479.1|
AT3g24550/MOB24_8 [Arabidopsis thaliana]
gi|16649063|gb|AAL24383.1| protein kinase-like protein
[Arabidopsis thaliana] gi|20260332|gb|AAM13064.1|
unknown protein [Arabidopsis thaliana]
gi|22136228|gb|AAM91192.1| protein kinase-like protein
[Arabidopsis thaliana] gi|30725474|gb|AAP37759.1|
At3g24550 [Arabidopsis thaliana]
Length = 652
Score = 46.2 bits (108), Expect = 6e-04
Identities = 33/99 (33%), Positives = 44/99 (44%)
Frame = +3
Query: 456 TRRSPASAVAPTSPIPPSRAASLTAPPAPLHPAVPPTATSSSSWTVTCYFSSRLFHPGSA 635
T SP + +P+ P PP+ + + T PPA P PPT T SS S+ P +
Sbjct: 3 TAPSPGTTPSPSPPSPPTNSTTTTPPPAASSP--PPTTTPSSPPPSP---STNSTSPPPS 57
Query: 636 SLKPQRTSSPSASSTLCPGAPPPTWSSHRASQSLSRTTP 752
S P PS +L P P P+ S+ S TTP
Sbjct: 58 SPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTP 96
>ref|NP_595582.1| putative COPII coat component; WD repeat protein [Schizosaccharomyces
pombe] gi|7493720|pir||T40765 web1 protein homolog -
fission yeast (Schizosaccharomyces pombe)
gi|2257531|dbj|BAA21425.1| WEB1 PROTEIN
[Schizosaccharomyces pombe] gi|2950507|emb|CAA17835.1|
SPBC8D2.20c [Schizosaccharomyces pombe]
Length = 1224
Score = 45.1 bits (105), Expect = 0.001
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 22/123 (17%)
Frame = +3
Query: 459 RRSPASAVAPTSPIPPSRAASLTAP---------PAPLHPAVPPTATSSSSWTVTCYFSS 611
+ S AS++ PT P R S T+P PA +HP PP+ ++++ W
Sbjct: 815 KTSQASSILPTVP----RTTSYTSPYATTSSHITPADVHPLPPPSTSTTAGWNDAPMLGQ 870
Query: 612 -------------RLFHPGSASLKPQRTSSPSASSTLCPGAPPPTWSSHRASQSLSRTTP 752
R PG++S +P S S+ STL P PPPT S ++ +++ P
Sbjct: 871 LPMRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPP--PPPTASMTASAPAIASPPP 928
Query: 753 VRI 761
++
Sbjct: 929 PKV 931
>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
Length = 754
Score = 44.3 bits (103), Expect = 0.002
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +3
Query: 468 PASAVAPTSPIPPSRAASLTAPPAPLHPA----VPPTATSSSSWTVTCYFSSRLFHPGSA 635
PA++ +P++P P + PP P P+ PP A+S SS T P S+
Sbjct: 134 PATSSSPSAPPEPPSPSPKNPPPTPPAPSPDSPTPPDASSPSSAPST--------QPASS 185
Query: 636 SLKPQRTSSPSASSTLCPGAPPPTWSSHRASQSLSRTTP 752
+P R++SPS +ST P PP ++ + + + P
Sbjct: 186 PPEPLRSASPSKNSTNSPSPHPPAPAASSSCPTSTANAP 224
Score = 38.9 bits (89), Expect = 0.091
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Frame = +3
Query: 426 SLGSCMADFGTRRSPASAVAPTS------PIPPSRAASLTAPPAPLHPAVPPTATSSSSW 587
S GS + T P ++ PT+ P PP+ + + PPAP PPT T
Sbjct: 23 SAGSPNTNPTTPPEPKASSCPTTGSPNALPKPPNPSPTAATPPAPATTTPPPTPTGP--- 79
Query: 588 TVTCYFSSRLFH---------PGSASLKPQRTSSPSASSTLCPGAPPPTWSSHRAS 728
TC S + P S++ P S PS SS AP TW H S
Sbjct: 80 --TCSPSPSAANSAPRESPPPPKSSAASPPPNSPPSTSSA---PAPATTWPPHSPS 130
Score = 32.7 bits (73), Expect = 6.5
Identities = 28/102 (27%), Positives = 42/102 (40%), Gaps = 6/102 (5%)
Frame = +3
Query: 465 SPASAVAPTSPIPPSRAASLTAPPAPLHPAVPPTATSSSSWTVTCYFSSRLFHPGSASLK 644
SP + SP S + PPAP + PT+T+++
Sbjct: 185 SPPEPLRSASPSKNSTNSPSPHPPAPAASSSCPTSTANA--------------------- 223
Query: 645 PQRTSSPSASSTLC--PGAPPPTW----SSHRASQSLSRTTP 752
P +P A+ST P +PPPTW S ++ SL+ +TP
Sbjct: 224 PPTCPTPPAASTASPEPTSPPPTWPAPSSKACSAASLTPSTP 265
