KCC001938A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001938A_C01 KCC001938A_c01
CAACGACCTATTATTAAGTGCAACGCGAGCGTCACTCGGAAAGCAAGTTAAAATTGAACT
GTTTGCAAGTTTGGTCCACAGAACTGACTGCTTGTCCTTGTAAATCATTACGAAACATTT
CAAATAACAAAGTTAGCTCTAGAATGCAGGCAATTCAACGGCCGCCACTCAGCGCTTGCG
CTCGCCCAACCCGTTGCCATTTTGCGCCGACGAAAGCTGCATTCCCATCTGGGAGAACTG
GGTTTGCCCAACTACAAGTATGCAGGGCTCGGCTACAAGGCGAGGAGCAGGCGGAGGAGG
ACCGCGTTGCCAGTGCGCGCGCGGAGGTCACGAAGCGGATAAAGGCACTGGGTACTCAGG
GCAAAGTGAAGGACGCTATCTCGGCCTTGGCGGGCCTGGCTAACCTGGGCATTCAGCCCG
ACACGCGGGCGGCGACGGCGCTGGTGCAGGCGTGCACTCGTGACATGGAGCTGGCTCAGA
GCATCTTTGACGAGATGTTTGGCGAGTTCCTGCAACCCGACGAGGTGACTTCTCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001938A_C01 KCC001938A_c01
         (535 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE05282.1| OSJNBb0014D23.16 [Oryza sativa (japonica cultiva...    50  2e-05
pir||A48232 cysteine-rich extensin-like protein 1 precursor - co...    50  2e-05
emb|CAA78398.1| Pistil extensin like protein, partial CDS only [...    50  2e-05
emb|CAE04214.1| OSJNBa0011E07.23 [Oryza sativa (japonica cultiva...    49  3e-05
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    49  5e-05

>emb|CAE05282.1| OSJNBb0014D23.16 [Oryza sativa (japonica cultivar-group)]
          Length = 266

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 27/76 (35%), Positives = 32/76 (41%), Gaps = 3/76 (3%)
 Frame = -2

Query: 483 CSEPAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHW-- 310
           C +P PCH   P P   PP C+ E P  P P +P  +P  C   P P     P    W  
Sbjct: 121 CEKPKPCHCEKPKPCEKPPPCKPEEPPKPPPEKPPPKPE-CKLVPYPYPVPYPYAGQWCC 179

Query: 309 -QRGPPPPAPRLVAEP 265
            +  PP P P    EP
Sbjct: 180 PKPEPPKPPPEPPKEP 195

 Score = 38.5 bits (88), Expect = 0.056
 Identities = 25/74 (33%), Positives = 32/74 (42%), Gaps = 3/74 (4%)
 Frame = -2

Query: 477 EPAPCHECT---PAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQ 307
           +P PCH C+   P P P P  C    P     P+P      C E P P     PP+   +
Sbjct: 100 KPKPCHCCSCEKPKPKPKPCHCEKPKPCHCEKPKP------C-EKPPPCKPEEPPKPPPE 152

Query: 306 RGPPPPAPRLVAEP 265
           + PP P  +LV  P
Sbjct: 153 KPPPKPECKLVPYP 166

>pir||A48232 cysteine-rich extensin-like protein 1 precursor - common tobacco
           gi|310923|gb|AAA34059.1| cysteine-rich extensin-like
           protein-1
          Length = 209

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 29/68 (42%), Positives = 31/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 483 CSEPAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPS-LCPEYPVPLSAS*PPRAHWQ 307
           C  P P     P P+P PP     CP  P PPRPR  PS   P  P P  +  PP     
Sbjct: 67  CPPPRPRPRPRPCPSPPPPPRPRPCPSPPPPPRPRPCPSPPPPPQPRPRPSPPPP----- 121

Query: 306 RGPPPPAP 283
             PPPPAP
Sbjct: 122 -SPPPPAP 128

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 28/68 (41%), Positives = 29/68 (42%)
 Frame = -2

Query: 468 PCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPPPP 289
           PC+   P P P PP     CP    PPRPR RP  CP  P P     P        PPPP
Sbjct: 50  PCYLTWPFPWPPPPPW--PCP----PPRPRPRPRPCPSPPPP-----PRPRPCPSPPPPP 98

Query: 288 APRLVAEP 265
            PR    P
Sbjct: 99  RPRPCPSP 106

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 28/67 (41%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCP---EYPVPLSAS*PPRAHWQR 304
           P PC    P P P P      CP  P PPRPR  PS  P     P P S   PP+   + 
Sbjct: 64  PWPCPPPRPRPRPRP------CPSPPPPPRPRPCPSPPPPPRPRPCP-SPPPPPQPRPRP 116

Query: 303 GPPPPAP 283
            PPPP+P
Sbjct: 117 SPPPPSP 123

>emb|CAA78398.1| Pistil extensin like protein, partial CDS only [Nicotiana tabacum]
          Length = 171

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 29/68 (42%), Positives = 31/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 483 CSEPAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPS-LCPEYPVPLSAS*PPRAHWQ 307
           C  P P     P P+P PP     CP  P PPRPR  PS   P  P P  +  PP     
Sbjct: 29  CPPPRPRPRPRPCPSPPPPPRPRPCPSPPPPPRPRPCPSPPPPPQPRPRPSPPPP----- 83

Query: 306 RGPPPPAP 283
             PPPPAP
Sbjct: 84  -SPPPPAP 90

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 28/68 (41%), Positives = 29/68 (42%)
 Frame = -2

Query: 468 PCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPPPP 289
           PC+   P P P PP     CP    PPRPR RP  CP  P P     P        PPPP
Sbjct: 12  PCYLTWPFPWPPPPPW--PCP----PPRPRPRPRPCPSPPPP-----PRPRPCPSPPPPP 60

Query: 288 APRLVAEP 265
            PR    P
Sbjct: 61  RPRPCPSP 68

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 28/67 (41%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCP---EYPVPLSAS*PPRAHWQR 304
           P PC    P P P P      CP  P PPRPR  PS  P     P P S   PP+   + 
Sbjct: 26  PWPCPPPRPRPRPRP------CPSPPPPPRPRPCPSPPPPPRPRPCP-SPPPPPQPRPRP 78

Query: 303 GPPPPAP 283
            PPPP+P
Sbjct: 79  SPPPPSP 85

>emb|CAE04214.1| OSJNBa0011E07.23 [Oryza sativa (japonica cultivar-group)]
          Length = 547

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 32/88 (36%), Positives = 35/88 (39%)
 Frame = -2

Query: 525 PRRVAGTRQTSRQRCSEPAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPV 346
           PRR A +R  S      PAP     P+P   PP   A  P  P PP P       P  P 
Sbjct: 66  PRRQAASRAPSL-----PAPLSPPAPSPPAPPPPPPAPSPPVPPPPPPAPSSPAPPSPPA 120

Query: 345 PLSAS*PPRAHWQRGPPPPAPRLVAEPC 262
           P S + PP       P PP PR    PC
Sbjct: 121 PSSPAPPPPPPAPSPPDPPPPRPAPPPC 148

 Score = 41.6 bits (96), Expect = 0.007
 Identities = 24/65 (36%), Positives = 29/65 (43%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P+P    +PAP P PPA     P  P PP PR  P  CP          PP    ++ PP
Sbjct: 116 PSPPAPSSPAPPPPPPA-----PSPPDPPPPRPAPPPCPPA--------PPMTRSRQAPP 162

Query: 294 PPAPR 280
           P + R
Sbjct: 163 PASTR 167

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 30/72 (41%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR--*RPSLCPEYPVPLSAS*PPRAHWQRG 301
           PAP     P+PAP  PA  +  P  PGPP P     PS  P  P P S + P  A     
Sbjct: 43  PAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPA 102

Query: 300 PPPPAPRLVAEP 265
           PP PAP   A P
Sbjct: 103 PPSPAPPSPAPP 114

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 27/70 (38%), Positives = 29/70 (40%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           PAP     P+PAP  PA  +  P  P PP P       P  P P   S  P A     PP
Sbjct: 81  PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPP 140

Query: 294 PPAPRLVAEP 265
            PAP L   P
Sbjct: 141 SPAPPLPPSP 150

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 28/65 (43%), Positives = 30/65 (46%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           PAP    +PAP PSPP+     P  P PP P   PS  P  P P S   P        PP
Sbjct: 215 PAPPSPPSPAP-PSPPSPAPPSPSPPAPPSPV-PPSPAPPSPAPPSPKPPAPPPPPSPPP 272

Query: 294 PPAPR 280
           PP PR
Sbjct: 273 PPPPR 277

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 28/70 (40%), Positives = 31/70 (44%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           PAP     P+PAP  P   +  P  P PP P   PS  P  P P S + P  A     PP
Sbjct: 53  PAPPSPAPPSPAPPSPGPPSPAP--PSPPSPA-PPSPAPPSPAPPSPAPPSPAPPSPAPP 109

Query: 294 PPAPRLVAEP 265
            PAP   A P
Sbjct: 110 SPAPPSPAPP 119

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*P-PRAHWQRGP 298
           P+P     P+PAP  PA  +  P  P PP P   PS  P  P P S + P P +     P
Sbjct: 71  PSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPA-PPSPAPPSPAPPSPAPPSPPSPAPPSP 129

Query: 297 PPPAPRLVAEP 265
            PPAP   + P
Sbjct: 130 SPPAPPSPSPP 140

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 28/70 (40%), Positives = 30/70 (42%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P     C P+PAP  PA  +  P  P PP P   PS  P  P P S   P  A     PP
Sbjct: 33  PGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPA-PPSPGPPSPAPPSP--PSPAPPSPAPP 89

Query: 294 PPAPRLVAEP 265
            PAP   A P
Sbjct: 90  SPAPPSPAPP 99

 Score = 40.4 bits (93), Expect = 0.015
 Identities = 24/65 (36%), Positives = 31/65 (46%), Gaps = 1/65 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P+P       P+P+PP+  +  P  P PP P   PS  P  P P S + P  A     PP
Sbjct: 61  PSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPA-PPSPAPPSPAPPSPAPPSPAPPSPAPP 119

Query: 294 -PPAP 283
            PP+P
Sbjct: 120 SPPSP 124

 Score = 40.4 bits (93), Expect = 0.015
 Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = -2

Query: 474 PAPCHECTPAP-APSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*P---PRAHWQ 307
           PAP     PAP +PSPP+     P  P PP P       P  PVP S + P   P +   
Sbjct: 124 PAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSP 183

Query: 306 RGPPPPAPRLVAEP 265
             PP PAP   A P
Sbjct: 184 PVPPSPAPPSPAPP 197

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 29/78 (37%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = -2

Query: 480 SEPAPCHECTPAPAP------SPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPR 319
           S PAP     P+PAP      +PP+     P  P PP P   PS  P  P P S S  P 
Sbjct: 130 SPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVP---PSPAPPSPTPPSPS--PP 184

Query: 318 AHWQRGPPPPAPRLVAEP 265
                 PP PAP +   P
Sbjct: 185 VPPSPAPPSPAPPVPPSP 202

 Score = 39.7 bits (91), Expect = 0.025
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*P-PRAHWQRGP 298
           P+P       P+PSPP   +  P  P PP P       P  PVP S + P P +     P
Sbjct: 169 PSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSP 228

Query: 297 PPPAPRLVAEP 265
           P PAP   + P
Sbjct: 229 PSPAPPSPSPP 239

 Score = 39.7 bits (91), Expect = 0.025
 Identities = 28/71 (39%), Positives = 30/71 (41%), Gaps = 1/71 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAP-SPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGP 298
           PAP     P+PAP SPP+     P  P PP P   PS  P  P P  A   P       P
Sbjct: 106 PAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPS-PPSPAPPLP-PSPAPPSPSPPVPPSP 163

Query: 297 PPPAPRLVAEP 265
            PP P   A P
Sbjct: 164 SPPVPPSPAPP 174

 Score = 38.5 bits (88), Expect = 0.056
 Identities = 26/71 (36%), Positives = 32/71 (44%), Gaps = 1/71 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAP-SPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGP 298
           P+P     P+PAP SPP+     P  P PP P       P  PVP S + P        P
Sbjct: 205 PSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPS---PPAPPSPVPPSPAPP-------SP 254

Query: 297 PPPAPRLVAEP 265
            PP+P+  A P
Sbjct: 255 APPSPKPPAPP 265

 Score = 38.1 bits (87), Expect = 0.073
 Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -2

Query: 474 PAPCHECTPAP-APSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGP 298
           PAP     P P +P+PP+     P  P PP P       P  P P S S  P A     P
Sbjct: 189 PAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPS--PPAPPSPVP 246

Query: 297 PPPAPRLVAEP 265
           P PAP   A P
Sbjct: 247 PSPAPPSPAPP 257

 Score = 38.1 bits (87), Expect = 0.073
 Identities = 26/66 (39%), Positives = 29/66 (43%)
 Frame = -2

Query: 480 SEPAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRG 301
           S PAP     P+PAP  PA  +  P  P PP P   P   P  P P +   PP       
Sbjct: 237 SPPAPPSPVPPSPAPPSPAPPSPKPPAPPPP-PSPPPPPPPRPPFPANTPMPPSP--PSP 293

Query: 300 PPPPAP 283
           PP PAP
Sbjct: 294 PPSPAP 299

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 24/70 (34%), Positives = 28/70 (39%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           PAP     P+PAP  PA  +  P  P PP P       P  P P   S  P       PP
Sbjct: 96  PAPPSPAPPSPAPPSPAPPSPAP--PSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPP 153

Query: 294 PPAPRLVAEP 265
            P+P +   P
Sbjct: 154 SPSPPVPPSP 163

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 25/64 (39%), Positives = 28/64 (43%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P P +   P   PSPP   A  P  P PP P   PS  P  P P+  S  P +     PP
Sbjct: 279 PFPANTPMPPSPPSPPPSPAP-PTPPTPPSPS-PPSPVPPSPAPVPPSPAPPSPAPSPPP 336

Query: 294 PPAP 283
            PAP
Sbjct: 337 SPAP 340

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 24/65 (36%), Positives = 28/65 (42%), Gaps = 1/65 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P P     P+PAP  P   A  P    PP P  RP      P+P S   PP +     PP
Sbjct: 244 PVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPP 303

Query: 294 -PPAP 283
            PP+P
Sbjct: 304 TPPSP 308

 Score = 37.4 bits (85), Expect = 0.12
 Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLS-AS*PPRAHWQRGP 298
           P P     PA  P PP+  +  P  P PP P   PS  P  PVP S A  PP       P
Sbjct: 273 PPPPRPPFPANTPMPPSPPSPPPS-PAPPTPPTPPSPSPPSPVPPSPAPVPP----SPAP 327

Query: 297 PPPAP 283
           P PAP
Sbjct: 328 PSPAP 332

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 474 PAPCHECTPAP-APSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGP 298
           PAP     P P +P+PP+  +  P  P PP P       P  P P+  S  P +     P
Sbjct: 202 PAPPSPAPPVPPSPAPPSPPSPAP--PSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSP 259

Query: 297 PPPAP 283
            PPAP
Sbjct: 260 KPPAP 264

 Score = 35.8 bits (81), Expect = 0.36
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = -2

Query: 474 PAPCHECTPAP-APSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGP 298
           PAP     P P +PSPP   +  P  P PP P   P + P    P  A   P +     P
Sbjct: 150 PAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPS--PPVPPSPAPPSPAPPVPPSPAPPSP 207

Query: 297 PPPAPRLVAEP 265
            PP P   A P
Sbjct: 208 APPVPPSPAPP 218

 Score = 34.7 bits (78), Expect = 0.80
 Identities = 22/67 (32%), Positives = 27/67 (39%), Gaps = 1/67 (1%)
 Frame = -2

Query: 480 SEPAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PP-RAHWQR 304
           S P+P       PAP  P   +  P  P PP P+      P  P P     PP  A+   
Sbjct: 227 SPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPM 286

Query: 303 GPPPPAP 283
            P PP+P
Sbjct: 287 PPSPPSP 293

 Score = 34.7 bits (78), Expect = 0.80
 Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
 Frame = -2

Query: 474 PAPCHECTPAP-APSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGP 298
           PAP     PAP +P PP+     P  P P  P   P   P  P P     P        P
Sbjct: 231 PAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSP 290

Query: 297 PPPAP 283
           P P P
Sbjct: 291 PSPPP 295

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P+P     P+PAP PP+        P PP P   P   P  P P  +  P  +      P
Sbjct: 308 PSPPSPVPPSPAPVPPS--------PAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSP 359

Query: 294 PPAP 283
            P+P
Sbjct: 360 SPSP 363

 Score = 32.7 bits (73), Expect = 3.1
 Identities = 21/55 (38%), Positives = 22/55 (39%)
 Frame = -2

Query: 447 APAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPPPPAP 283
           A A   P     CP  P PP P       P  P P S + P  A    GPP PAP
Sbjct: 27  ANAQCVPGGIFNCPPSPAPPSP------APPSPAPPSPAPPSPAPPSPGPPSPAP 75

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 23/64 (35%), Positives = 27/64 (41%)
 Frame = -2

Query: 474 PAPCHECTPAPAPSPPACRAECPG*PGPPRPR*RPSLCPEYPVPLSAS*PPRAHWQRGPP 295
           P+P     P P PSPP      P  P PP P   P + P  P P  +  PP       P 
Sbjct: 257 PSPKPPAPPPP-PSPPP-----PPPPRPPFPANTP-MPPSPPSPPPSPAPPTPPTPPSPS 309

Query: 294 PPAP 283
           PP+P
Sbjct: 310 PPSP 313



EST assemble image


clone accession position
1 MX241e04_r BP091596 1 332
2 HC029a10_r AV634085 61 597
3 LC031f03_r AV621129 67 612
4 LC055g06_r AV622867 89 623
5 LC070e08_r AV623924 94 583
6 LC087g01_r AV625088 95 595




Chlamydomonas reinhardtii
Kazusa DNA Research Institute