Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001927A_C01 KCC001927A_c01
(489 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T31424 C-terminal domain-binding protein rA4, splice form 1... 40 0.015
ref|NP_897185.1| conserved hypothetical [Synechococcus sp. WH 81... 36 0.22
dbj|BAC80041.1| polymyositis/scleroderma autoantigen 2 -like [Or... 36 0.29
ref|NP_066189.1| adaptor protein with pleckstrin homology and sr... 35 0.37
gb|AAP42878.1| NanG6 [Streptomyces nanchangensis] 30 0.81
>pir||T31424 C-terminal domain-binding protein rA4, splice form 1 - rat
(fragment) gi|1438536|gb|AAC52659.1| rA4
Length = 235
Score = 40.0 bits (92), Expect = 0.015
Identities = 31/93 (33%), Positives = 36/93 (38%)
Frame = -3
Query: 457 RRAQPPRPAGHAVAPHLARSCCRLLSAIARSLRRQAAAPRLSGLCVWQFAGGLRSDSRPS 278
RRAQPP P GH AP CR L A+ + P LS L R S
Sbjct: 24 RRAQPPPPNGHVGAPR-----CRCLPALLQLTELSRGPPPLSALD--------RPSLAAS 70
Query: 277 TARPQRYRLVASGQPQSLQEQSTSAPAPPDSQP 179
A P A P S + + PAP +QP
Sbjct: 71 AADPSCSAFAACRLPSSSPPRPRALPAPGPTQP 103
>ref|NP_897185.1| conserved hypothetical [Synechococcus sp. WH 8102]
gi|33632796|emb|CAE07607.1| conserved hypothetical
[Synechococcus sp. WH 8102]
Length = 390
Score = 36.2 bits (82), Expect = 0.22
Identities = 23/84 (27%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
Frame = -3
Query: 412 HLARSCCRLLSAIARSLRRQAAAP--RLSGLCVWQFAGGLRSDSRPSTARPQRYRLVASG 239
H AR+ ++L + ++ ++Q + P +LS L G + P +PQR+ + A
Sbjct: 110 HQARASRQMLQGLQQAAQQQQSEPSSQLSDLPPGASGGSVELSMAPPLDQPQRFGIQAPP 169
Query: 238 QPQSLQEQSTSAPAPPDSQPSYCA 167
+ +S S + P+SQPS+ A
Sbjct: 170 ESRSRPHASPAPVPQPESQPSHDA 193
>dbj|BAC80041.1| polymyositis/scleroderma autoantigen 2 -like [Oryza sativa
(japonica cultivar-group)]
Length = 1031
Score = 35.8 bits (81), Expect = 0.29
Identities = 23/55 (41%), Positives = 27/55 (48%)
Frame = +3
Query: 303 PPANCHTQRPERRGAAACLRRLRAIAERRRQQERARCGATA*PAGLGGWARRGER 467
P AN ++ AAACL L A R++ R R A A P LGG RRG R
Sbjct: 2 PTANLRSRAAAAAAAAACLAALAVAALLHRRRRRGRARAPASPGLLGG--RRGRR 54
>ref|NP_066189.1| adaptor protein with pleckstrin homology and src homology 2 domains
[Homo sapiens] gi|34098358|sp|O14492|APS_HUMAN SH2 and
PH domain-containing adapter protein APS
gi|2447036|dbj|BAA22514.1| APS [Homo sapiens]
Length = 632
Score = 35.4 bits (80), Expect = 0.37
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 13/100 (13%)
Frame = -2
Query: 482 PSAPGALPTPSPAAEACWS-------------RGCPASGALLLPPPFSDST*ST*AGSSP 342
P PG P +PA+ ACWS CP + S S S+ A S P
Sbjct: 521 PPEPGPTPPAAPASPACWSDSPGQHYFSSLAAAACPPASPSDAAGASSSSASSSSAASGP 580
Query: 341 ASFRPLCVAICRRSSER*PAFHSASTALSSSCFRSAPKPP 222
A RP+ + RS +SA L + +A +PP
Sbjct: 581 APPRPVEGQLSARSRS-----NSAERLLEAVAATAAEEPP 615
>gb|AAP42878.1| NanG6 [Streptomyces nanchangensis]
Length = 524
Score = 30.0 bits (66), Expect(2) = 0.81
Identities = 21/53 (39%), Positives = 23/53 (42%)
Frame = +3
Query: 234 G*PEATRR*RCGRAVEGRLSLRRPPANCHTQRPERRGAAACLRRLRAIAERRR 392
G P +RR R R RRPP +RP RR A A RR R RR
Sbjct: 409 GLPGFSRRLPGPRRTAARRGPRRPPHRARHRRPGRRPARAGRRRPRTAPGARR 461
Score = 23.1 bits (48), Expect(2) = 0.81
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 404 RQMRGNRVTSRPRR 445
RQ+R R+ SRPRR
Sbjct: 482 RQLRARRLRSRPRR 495
