KCC001925A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001925A_C01 KCC001925A_c01
cacgtgggcgccttcgtgggccacgtggatggcgagatccgcccctggctggcgcagacg
ctgtcggcggtgcctcagctGAAGAAGTACGGCGACGACCCCGTGGCTCTGCAGGCCATC
GTGTACTGCATCATCGGCGCGCCGGTGGTGCTGCTGTTCTCGCTGCTGCTATCGTGCTGC
TGCCGCTCGGGTCATCGTGCTGAGCCGGACGCCCCGGCTACCGTGGGCGGCAAGCGGAAG
GTCGGCAAGGGCAAGGCGAAGCAGGGCTGATGGGGCGGCCCACGGGACGCTTATGCACAC
AATAAAGACGACGACTCGTGGACACCAAATGACGCGTACGGGTACTACGACCAGGCGGGC
GGAGGCGGCGGGCCAGCAGCAGGGGCACTAGCGGTGCCAGCTCACCTACAGTTCCAGCAC
TTGCCAGGCACGAGCTCTCTGCCCCCAGGATTTTCAGTAGGAGACAGACTAGATGCACTA
GGGGCAGCGAACGGCGGCGGCGGCGCGACCGGTACCCACAGCGGTGCCGCCGCGTTCGCA
GCGGCGTACCGCAGCGGCTACCGCCCTTCATCGGAGCGGCAGTTCCGCACGATGCCAGGG
TCGGCTGCGCAGCAGGAGGCAACGGCGACGGTGGTCAGCTCTCGTCGGACGTCAGACCTC
CTGTGGAGGAGAGCTGCGGGGCCGTTGGGGCCCCTGGATCTGCAGCGGGCGAGAGCATCA
GACGCGTACGAAGCAGTCGACTCGCCGGTGTAGGAAGGGGGGTTGCTCTATGGACACCGT
GTGGGTGCCTGTCGACTGATAGAATGGGCTGCTGGACCTTGTAGCCTGAAAGCTCCATGT
ATTGCTCTGGAGGCGGTAGGGAGGGCAGAGAGGCTAGTGCTGGGTATTGTAGGCAGTTGG
GCGGGAGAGAAGTGCTGAGCGTGCGCAGGTAGGGTAGACACCGCTCCCCTCTCGCTGTGG
GGATGGTTGTGAGGTTTGGCCGCTGCCTGGTATTGGACTCTT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001925A_C01 KCC001925A_c01
         (1002 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_174461.1| formin homology 2 (FH2) domain-containing prote...    44  2e-09
ref|XP_204283.2| RIKEN cDNA 2410003B16 [Mus musculus]                  40  2e-06
gb|AAG00079.1|AF205079_1 90 kDa actin-associated protein palladi...    39  3e-06
dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (jap...    37  6e-06
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]                       50  5e-05

>ref|NP_174461.1| formin homology 2 (FH2) domain-containing protein [Arabidopsis
           thaliana] gi|25403124|pir||G86441 unknown protein
           [imported] - Arabidopsis thaliana
           gi|12321294|gb|AAG50715.1|AC079041_8 unknown protein
           [Arabidopsis thaliana]
          Length = 1201

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 33/114 (28%), Positives = 48/114 (41%)
 Frame = -2

Query: 557 PLRYAAANAAAPLWVPVAPPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*AGTASAPA 378
           P  + +  + +P   P  PPPP    S +S SP++ P      P          T S   
Sbjct: 490 PPLFTSTTSFSPSQPPPPPPPPPLFMSTTSFSPSQPPPPPPPPP------LFTSTTSFSP 543

Query: 377 AGPPPPPAWS*YPYASFGVHESSSLLCA*ASRGPPHQPCFALPLPTFRLPPTVA 216
           + PPPPP     P  SF   +  + L    ++ PP  P    PLP+  +PP +A
Sbjct: 544 SQPPPPP-----PLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPSRSIPPPLA 592

 Score = 39.3 bits (90), Expect(3) = 2e-09
 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
 Frame = -3

Query: 934 PYLRTLSTSLPPNCLQYPALASLPSLPPPEQYMELSGYKVQQPILSVDRHPHGVHRATPL 755
           P L T +TS  P+  Q P     P  PPP  +M  + +   QP               P 
Sbjct: 490 PPLFTSTTSFSPS--QPP-----PPPPPPPLFMSTTSFSPSQP---------------PP 527

Query: 754 PTPASRLLRTRLMLSPAADPGAPTAPQLSSTGGLTS-----DES*PPSPLPPAAQPT 599
           P P   L  +    SP+  P  P  P  S+   LT+     +++ PP P PP   P+
Sbjct: 528 PPPPPPLFTSTTSFSPSQPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPS 584

 Score = 38.9 bits (89), Expect(2) = 1e-04
 Identities = 39/138 (28%), Positives = 48/138 (34%), Gaps = 7/138 (5%)
 Frame = -3

Query: 934 PYLRTLSTSLPPNCLQYPALASLPSLPPPEQYMELSGYKVQQPILSVDRHPHGVHRATPL 755
           P L + S   P   L  P   + P  PPP     L    +  P+      P       P 
Sbjct: 550 PPLPSFSNRDPLTTLHQPINKTPPPPPPPPP--PLPSRSIPPPLAQ----PPPPRPPPPP 603

Query: 754 PTPASRLLRTRLMLSPAADPGAPTAP-QLSSTGGLTSDES*PPSPLPPAAQPTLASCGTA 578
           P P S    +R + SP+A P  P  P    STG     +  PP P PP  +   A C   
Sbjct: 604 PPPPS----SRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAPP 659

Query: 577 AP------MKGGSRCGTP 542
            P        G  R G P
Sbjct: 660 PPPPPPTSHSGSIRVGPP 677

 Score = 35.0 bits (79), Expect(3) = 2e-09
 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
 Frame = -3

Query: 283 VGRPISPASPCPCRPSACRPR*PGRPAQHDDPSGSSTIAA---------ARTAAPPARR* 131
           VG P +P  P P  P A     P  PA    P  S+ + A         ++T APP    
Sbjct: 674 VGPPSTPPPPPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPPPL 733

Query: 130 CSTRWPAEPRGRRRTSSAEAPPTASAPARGGSRHPRGP 17
             T  P  P G  R +S+  PP     A+G +  P  P
Sbjct: 734 SKTPVPPPPPGLGRGTSSGPPPLG---AKGSNAPPPPP 768

 Score = 34.3 bits (77), Expect(3) = 2e-05
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
 Frame = -3

Query: 865 PSLPPPEQYMELSGYKVQQPILSVDRHPHGVHRATPLPTPASRLLRTRLMLSPAADPGAP 686
           P  PPP  +   + +   QP               P P P   L  +    SP+  P  P
Sbjct: 485 PPPPPPPLFTSTTSFSPSQP---------------PPPPPPPPLFMSTTSFSPSQPPPPP 529

Query: 685 TAPQL-SSTGGLTSDES*PPSPLP 617
             P L +ST   +  +  PP PLP
Sbjct: 530 PPPPLFTSTTSFSPSQPPPPPPLP 553

 Score = 29.6 bits (65), Expect(3) = 2e-05
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 512 PVAPPPPFAAPSASSLSPTENPGGRELVPGKCW--NCR*AGTASAPAAGPPPPPAW 351
           P  PPPP   PS S   P   P      P      + R   + SAP   PPPPP++
Sbjct: 573 PPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSF 628

 Score = 29.6 bits (65), Expect(3) = 2e-09
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -2

Query: 512 PVAPPPPFAAPSASSL-SPTENPGGRELVP--GKCWNCR*AGTASAPAAGPPPPP 357
           P  PPPP   PS+ S+ SP+  P      P  G   N R    A  P   PPPPP
Sbjct: 597 PRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKR---QAQPPPPPPPPPP 648

 Score = 29.3 bits (64), Expect(2) = 1e-04
 Identities = 21/59 (35%), Positives = 26/59 (43%), Gaps = 8/59 (13%)
 Frame = -2

Query: 506 APPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*AGTASAPA--------AGPPPPPA 354
           APPPP   P + + +P   P  +  VP         GT+S P         A PPPPPA
Sbjct: 713 APPPPPPPPLSKTPAPPPPPLSKTPVPPPPPGLG-RGTSSGPPPLGAKGSNAPPPPPPA 770

 Score = 26.2 bits (56), Expect(3) = 2e-05
 Identities = 26/99 (26%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
 Frame = -3

Query: 295 HKRPVGRPISPASPCPCRPSACRPR*PGRPAQHDDPSGSSTIAAARTAAPP------ARR 134
           +KR    P  P  P P R  A +   P  P      SGS  +    T  PP      A  
Sbjct: 633 NKRQAQPPPPPPPPPPTRIPAAKCAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPPPKANI 692

Query: 133 *CSTRWPAEPRGRRRTSSAEAPPTASAPARGGSRHPRGP 17
             + + PA P     ++   APP    P    +  P  P
Sbjct: 693 SNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPP 731

>ref|XP_204283.2| RIKEN cDNA 2410003B16 [Mus musculus]
          Length = 1002

 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
 Frame = -2

Query: 500 PPPFAAPSASSL----SPTENPGGRE-----LVPGKCWNCR*AGTASAPAAGPPPPPAWS 348
           P P ++PS+SSL    SPT  P GR      + P   W        S+P+  PPPPP +S
Sbjct: 377 PTPTSSPSSSSLPSPLSPTPRPFGRAPGPPFVEPEAMWG------PSSPSPPPPPPPVFS 430

Query: 347 *YPYASFGVHE------------SSSLLCA*ASR-GPPHQPCFALPLPTFRLPPTVA 216
             P A++ V +            SS+  CA  +R GP   P   L       PP VA
Sbjct: 431 --PSAAYPVPDVFPLPPPPPPLPSSTSHCASPARFGPSQTPAAFLSALLPSQPPPVA 485

 Score = 34.7 bits (78), Expect(2) = 2e-06
 Identities = 18/42 (42%), Positives = 23/42 (53%)
 Frame = -3

Query: 697 PGAPTAPQLSSTGGLTSDES*PPSPLPPAAQPTLASCGTAAP 572
           P  P  P  SS+ G ++  S PP P PP A P LA+C +  P
Sbjct: 296 PAPPGVPCNSSSSGSSAPPS-PPFPPPPPAFPELAACASPVP 336

>gb|AAG00079.1|AF205079_1 90 kDa actin-associated protein palladin [Mus musculus]
          Length = 323

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
 Frame = -2

Query: 500 PPPFAAPSASSL----SPTENPGGRE-----LVPGKCWNCR*AGTASAPAAGPPPPPAWS 348
           P P ++PS+SSL    SPT  P GR      + P   W        S+P+  PPPPP +S
Sbjct: 164 PTPTSSPSSSSLPSPLSPTPRPFGRAPGPPFVEPEAMWG------PSSPSPPPPPPPVFS 217

Query: 347 *YPYASFGVHE------------SSSLLCA*ASR-GPPHQPCFALPLPTFRLPPTVA 216
             P A++ V +            SS+  CA  +R GP   P   L       PP VA
Sbjct: 218 --PSAAYPVPDVFPLPPPPPPLPSSTSHCASPARFGPGQTPAAFLSALLPSQPPPVA 272

 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 20/46 (43%), Positives = 25/46 (53%)
 Frame = -3

Query: 709 PAADPGAPTAPQLSSTGGLTSDES*PPSPLPPAAQPTLASCGTAAP 572
           P A PG P     SS+ G ++  S PP P PP A P LA+C +  P
Sbjct: 82  PPAPPGVPCN---SSSSGSSAPPS-PPFPPPPPAFPELAACASPVP 123

>dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (japonica
            cultivar-group)]
          Length = 1627

 Score = 37.4 bits (85), Expect(3) = 6e-06
 Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 6/110 (5%)
 Frame = -3

Query: 883  PALASLPSLPPPEQYMELSGYKVQQPILSVDRHP------HGVHRATPLPTPASRLLRTR 722
            PA + L S+PPP     L  +  Q         P       GV   TP   P   L  T 
Sbjct: 869  PASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPPRSGVGGNTPPAPPPPPLRSTV 928

Query: 721  LMLSPAADPGAPTAPQLSSTGGLTSDES*PPSPLPPAAQPTLASCGTAAP 572
              +SP   P  P  P   S+G        PP P PP + P+  +  +A P
Sbjct: 929  PAISPPPPP--PPPPLKPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAPP 976

 Score = 35.0 bits (79), Expect(2) = 4e-04
 Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 4/125 (3%)
 Frame = -3

Query: 904  PPNCLQYPALASLPSLPPPEQYMELSGYKVQQPILSVDRHPHGVHRATPLPTPASRLLRT 725
            PP+     A +S P  PPP   +         P +S    P       P P PA+R    
Sbjct: 962  PPSAPSSRAFSSAPPPPPPPPLLRSVPPPPPPPPISHSNAP------PPPPLPAARFNAP 1015

Query: 724  RLMLSPAAD----PGAPTAPQLSSTGGLTSDES*PPSPLPPAAQPTLASCGTAAPMKGGS 557
                 P       P  P  P ++ +G   S    PPSP PP   P         P   G+
Sbjct: 1016 PPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPP-PPSPPPPPPPPGARPGPPPPPPPPGA 1074

Query: 556  RCGTP 542
            R G P
Sbjct: 1075 RPGPP 1079

 Score = 32.7 bits (73), Expect(3) = 0.002
 Identities = 18/52 (34%), Positives = 23/52 (43%)
 Frame = -2

Query: 512  PVAPPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*AGTASAPAAGPPPPP 357
            P APPPP    +  ++SP   P    L P          ++ AP   PPPPP
Sbjct: 916  PPAPPPPPLRSTVPAISPPPPPPPPPLKP----------SSGAPCPPPPPPP 957

 Score = 32.0 bits (71), Expect(2) = 2.8
 Identities = 33/113 (29%), Positives = 35/113 (30%), Gaps = 8/113 (7%)
 Frame = -3

Query: 856  PPPEQYMELSGYKVQQPILSVDRHPHGVHRATPLPTPASRLLRTRLMLSPAADP--GAPT 683
            PPP   +  SG     P       P     A P P P       R    P   P  G P+
Sbjct: 1031 PPPPPPITRSGAPPSPPPPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPS 1090

Query: 682  APQLSSTGGLTSDES*PPSPL------PPAAQPTLASCGTAAPMKGGSRCGTP 542
            AP L   GG  S    PP P       PP   P         P   G R G P
Sbjct: 1091 APPLPPPGGRASAPPPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRLGGP 1143

 Score = 31.6 bits (70), Expect(2) = 4e-04
 Identities = 20/52 (38%), Positives = 20/52 (38%)
 Frame = -2

Query: 512  PVAPPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*AGTASAPAAGPPPPP 357
            P  PPPP   PSA    P   PGGR   P            S     PPPPP
Sbjct: 1079 PPPPPPPGGRPSAP---PLPPPGGRASAPPP------PPPPSTRLGAPPPPP 1121

 Score = 30.4 bits (67), Expect(3) = 6e-06
 Identities = 32/110 (29%), Positives = 36/110 (32%), Gaps = 17/110 (15%)
 Frame = -3

Query: 286  PVGRPISPASPCPCRPSACRP----------R*PGRPAQHDDPSGSSTIA-----AARTA 152
            P   P  P+ P P  P   RP            PG P     P G  +         R +
Sbjct: 1043 PPSPPPPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRAS 1102

Query: 151  APPARR*CSTRWPAEPRGRRRTSSAEAPPTASAPA--RGGSRHPRGPRRR 8
            APP     STR  A P      +   APP   AP    GG   P  P  R
Sbjct: 1103 APPPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRLGGPPPPPPPGGR 1152

 Score = 27.7 bits (60), Expect(3) = 0.002
 Identities = 29/97 (29%), Positives = 32/97 (32%), Gaps = 3/97 (3%)
 Frame = -3

Query: 286  PVGRPISPASPCPCRPSACR---PR*PGRPAQHDDPSGSSTIAAARTAAPPARR*CSTRW 116
            P  R  S A P P  P   R   P  P  P  H +      + AAR  APP         
Sbjct: 966  PSSRAFSSAPPPPPPPPLLRSVPPPPPPPPISHSNAPPPPPLPAARFNAPPP-------- 1017

Query: 115  PAEPRGRRRTSSAEAPPTASAPARGGSRHPRGPRRRP 5
            P  P     T+   APP    P    S  P  P   P
Sbjct: 1018 PPPP----PTTHFNAPPPPPPPPITRSGAPPSPPPPP 1050

 Score = 23.9 bits (50), Expect(3) = 6e-06
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
 Frame = -2

Query: 539  ANAAAPLWVPVA----PPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*AGTASAPAAG 372
            +NA  P  +P A    PPPP   P+    +P   P      P          T S     
Sbjct: 999  SNAPPPPPLPAARFNAPPPPPPPPTTHFNAPPPPP------PPPI-------TRSGAPPS 1045

Query: 371  PPPPPA 354
            PPPPP+
Sbjct: 1046 PPPPPS 1051

 Score = 22.3 bits (46), Expect(3) = 0.002
 Identities = 9/21 (42%), Positives = 12/21 (56%)
 Frame = -3

Query: 634 PPSPLPPAAQPTLASCGTAAP 572
           PP PLPP   P  +S  ++ P
Sbjct: 858 PPPPLPPPPPPPASSGLSSIP 878

 Score = 21.2 bits (43), Expect(2) = 2.8
 Identities = 8/13 (61%), Positives = 9/13 (68%)
 Frame = -2

Query: 512  PVAPPPPFAAPSA 474
            P APPPP   PS+
Sbjct: 1160 PGAPPPPGGNPSS 1172

>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
          Length = 1325

 Score = 50.4 bits (119), Expect = 5e-05
 Identities = 69/334 (20%), Positives = 133/334 (39%), Gaps = 6/334 (1%)
 Frame = -2

Query: 986  AAAKPHNHPHSERGAVSTLPAHAQHFSPAQLPTIPSTSLSALPTASRAIHGAFRLQGPAA 807
            +++ P +   +   + S+ P+ +     A   + PS+S S+ P+AS +   +     P+A
Sbjct: 735  SSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSA 794

Query: 806  HSISRQAPTRCP*SNPPSYTGESTASYASDALARCRSRGPNGPAALLHRRSDVRRELTTV 627
             S S  + +    S+ PS +  S  S +S A +   S  P+  ++     S      ++ 
Sbjct: 795  SSSSAPSSSS---SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 851

Query: 626  AVASCCAADPGIVRNCRSDEGR*PLRYAAANAAAPLWVPVAPPPPFAAPSASSLSPTENP 447
            A ++  ++ P    +  S          A++++AP     AP    ++  +SS S   + 
Sbjct: 852  APSASSSSAPSSSSSAPS----------ASSSSAPSSSSSAPSASSSSAPSSSSSSAPSA 901

Query: 446  GGRELVPGKCWNCR*AGTASAPAAGPPPPPAWS*YPYASFGVHESSSLLCA*ASRGP--- 276
                       +   A ++SAP++     P+ S    +S     SSS   A +S  P   
Sbjct: 902  SSSSAPSSSSSSAPSASSSSAPSSSSSSAPSAS---SSSAPSSSSSSAPSASSSSAPSSS 958

Query: 275  ---PHQPCFALPLPTFRLPPTVAGASGSAR*PERQQHDSSSENSSTTGAPMMQYTMACRA 105
               P     + P  +   P   + ++ S+         SSS  SS++ AP    + A  +
Sbjct: 959  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 1018

Query: 104  TGSSPYFFS*GTADSVCASQGRISPSTWPTKAPT 3
            + S+P       + S   S    +PS   + AP+
Sbjct: 1019 SSSAP-----SASSSSAPSSSSSAPSASSSSAPS 1047

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 74/327 (22%), Positives = 135/327 (40%), Gaps = 4/327 (1%)
 Frame = -2

Query: 983  AAKPHNHPHSERGAVSTLPAHAQHFS-PAQLPTIPSTSLSALPTASRAIHGAFRLQGPAA 807
            A KP     S   + S+  A +   S P+   +   +S S+ P+AS +   +     P+A
Sbjct: 659  ACKPETESSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSA 718

Query: 806  HSISRQAPTRCP*SNPPSYTGESTASYASDALARCRSRGPNGPAALLHRRSDVRRELTTV 627
             S S  + +    S+ PS +  S  S +S A +   S  P+  ++     S      ++ 
Sbjct: 719  SSSSAPSSS----SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASS------SSA 768

Query: 626  AVASCCAADPGIVRNCRSDEGR*PLRYAAANAAAPLWVPVAPP--PPFAAPSASSLSPTE 453
              +S  +A      +  S     P   +A++++AP     + P     +APS+SS +P+ 
Sbjct: 769  PSSSSSSAPSASSSSAPSSSSSAP---SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSA 825

Query: 452  NPGGRELVPGKCWNCR*AGTASAPAAGPPPPPA-WS*YPYASFGVHESSSLLCA*ASRGP 276
            +       P    +   A ++SAP++    P A  S  P +S     +SS     +S   
Sbjct: 826  SSSS---APSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSA 882

Query: 275  PHQPCFALPLPTFRLPPTVAGASGSAR*PERQQHDSSSENSSTTGAPMMQYTMACRATGS 96
            P     + P  +    P+ + +S  +         SS+ ++S++ AP    + A  A+ S
Sbjct: 883  PSASSSSAPSSSSSSAPSASSSSAPS------SSSSSAPSASSSSAPSSSSSSAPSASSS 936

Query: 95   SPYFFS*GTADSVCASQGRISPSTWPT 15
            S    S  +A S  +S    S S+ P+
Sbjct: 937  SAPSSSSSSAPSASSSSAPSSSSSAPS 963

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 65/312 (20%), Positives = 124/312 (38%)
 Frame = -2

Query: 938  STLPAHAQHFSPAQLPTIPSTSLSALPTASRAIHGAFRLQGPAAHSISRQAPTRCP*SNP 759
            S+ P+ +     A   + PS+S S+ P+AS +   +     P+A S S  + +    S+ 
Sbjct: 782  SSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS----SSA 837

Query: 758  PSYTGESTASYASDALARCRSRGPNGPAALLHRRSDVRRELTTVAVASCCAADPGIVRNC 579
            PS +  S  S +S A +   S  P+  ++     S      ++ A ++  ++ P      
Sbjct: 838  PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPS----- 892

Query: 578  RSDEGR*PLRYAAANAAAPLWVPVAPPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*A 399
             S     P   +A++++AP     + P   ++ + SS S +         P        +
Sbjct: 893  -SSSSSAP---SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS-------S 941

Query: 398  GTASAPAAGPPPPPAWS*YPYASFGVHESSSLLCA*ASRGPPHQPCFALPLPTFRLPPTV 219
             ++SAP+A     P+      +S     +SS     +S   P     + P  +    P+ 
Sbjct: 942  SSSSAPSASSSSAPS------SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSA 995

Query: 218  AGASGSAR*PERQQHDSSSENSSTTGAPMMQYTMACRATGSSPYFFS*GTADSVCASQGR 39
            + +S  +         SSS  SS++ AP    + A  ++ S+P       + S   S   
Sbjct: 996  SSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP-----SASSSSAPSSSS 1050

Query: 38   ISPSTWPTKAPT 3
             +PS   + AP+
Sbjct: 1051 SAPSASSSSAPS 1062

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 68/327 (20%), Positives = 134/327 (40%), Gaps = 1/327 (0%)
 Frame = -2

Query: 986  AAAKPHNHPHSERGAVSTLPAHAQHFSPAQLPTIPSTSLSALPTASRAIHGAFRLQGPAA 807
            +++ P +   +   + S+ P+ +     A   + PS+S SA   +S +   +     P+A
Sbjct: 720  SSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSA 779

Query: 806  HSISRQAPTRCP*SNPPSYTGESTASYASDALARCRSRGPNGPAALLHRRSDVRRELTTV 627
             S S  + +    S P + +  + +S +S A +   S  P+  ++     S      ++ 
Sbjct: 780  SSSSAPSSSS---SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 836

Query: 626  AVASCCAADPGIVRNCRSDEGR*PLRYAAANAAAPLWVPVAP-PPPFAAPSASSLSPTEN 450
            A ++  ++ P    +  S          A++++AP     AP     +APS+SS +P+ +
Sbjct: 837  APSASSSSAPSSSSSAPS----------ASSSSAPSSSSSAPSASSSSAPSSSSSAPSAS 886

Query: 449  PGGRELVPGKCWNCR*AGTASAPAAGPPPPPAWS*YPYASFGVHESSSLLCA*ASRGPPH 270
                            + ++SAP+A     P+ S    +S     SSS   + +S   P 
Sbjct: 887  SSSAPS----------SSSSSAPSASSSSAPSSS----SSSAPSASSSSAPSSSSSSAPS 932

Query: 269  QPCFALPLPTFRLPPTVAGASGSAR*PERQQHDSSSENSSTTGAPMMQYTMACRATGSSP 90
                + P  +    P+ + +S  +         SSS  SS++ AP    + A  ++ SS 
Sbjct: 933  ASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA 992

Query: 89   YFFS*GTADSVCASQGRISPSTWPTKA 9
               S  +A S  +S    S S+ P+ +
Sbjct: 993  PSASSSSAPSSSSSAPSASSSSAPSSS 1019

 Score = 40.4 bits (93), Expect = 0.048
 Identities = 44/180 (24%), Positives = 72/180 (39%), Gaps = 1/180 (0%)
 Frame = -2

Query: 545  AAANAAAPLWVPVAPPPPFAAPSASSLSPTENPGGRELVPGKCWNCR*AGTASAPAAGPP 366
            A  NA  P     +  P  ++ SASS S +         P    +   A ++SAP++   
Sbjct: 655  ATENACKPETESSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 714

Query: 365  PPPA-WS*YPYASFGVHESSSLLCA*ASRGPPHQPCFALPLPTFRLPPTVAGASGSAR*P 189
             P A  S  P +S     +SS     +S   P     + P  +   P   + ++ S+   
Sbjct: 715  APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 774

Query: 188  ERQQHDSSSENSSTTGAPMMQYTMACRATGSSPYFFS*GTADSVCASQGRISPSTWPTKA 9
                  SSS  SS++ AP    + A  ++ SS    S  +A S  +S    S S+ P+ +
Sbjct: 775  SAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 834



EST assemble image


clone accession position
1 MXL024b12_r BP094509 1 470
2 LC057g01_r AV623007 245 717
3 HC027a10_r AV633928 280 800
4 MX004h10_r BP086247 608 1002




Chlamydomonas reinhardtii
Kazusa DNA Research Institute