KCC001924A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001924A_C01 KCC001924A_c01
gttcaacatcttcttGTCGTTGCTACCTACACACACAGCCAAAATGCCGAACCCCATTGT
CTTCTTCGACATCACCGCCGATGGCGCGCCTGTGGGCCGCATCGAGATGGAGCTGTACGC
CGACGACGTGCCCAAGACCGCGGAGAACTTCCGCGCCCTGTGCACCGGCGAGAAGGGCGT
TGGCCGCTCTGGCAAGCCCCTGCACTTCAAGGGCTCCACCTTCCACCGTGTGATCCCCAA
CTTCATGTGCCAGGGCGGTGACTTCACCCGCGGCAACGGCACCGGTGGTGAGTCCATCTA
CGGCGAGAAGTTCCCCGATGAGAACTTCAAGCACCGCCACACCGGCCCCGGCGTGCTGTC
CATGGCCAACGCCGGCCCCAACACCAACGGCTCGCAGTTCTTCCTGTGCACCGTGGAGAC
CGCCTGGCTGGACGGCAAGCACGTCGTGTTCGGCAAGGTCTGCAAGGGCATGGACGTTGT
CAAGAAGGTGGAGGGCTACGGCTCGTCCAGCGGCAAGACCCGCGCCACCATCGCCATTGC
CGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001924A_C01 KCC001924A_c01
         (544 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T07950 peptidylprolyl isomerase (EC 5.2.1.8) 1 - Chlamydomo...   351  4e-96
gb|AAN31483.1| peptidylprolyl isomerase [Phytophthora infestans]      289  1e-77
gb|AAC47125.1| cyclophilin                                            285  2e-76
ref|NP_506749.1| CYcloPhilin (18.4 kD) (cyp-7) [Caenorhabditis e...   285  3e-76
emb|CAC81066.1| putative cyclosporin A-binding protein [Picea ab...   281  4e-75

>pir||T07950 peptidylprolyl isomerase (EC 5.2.1.8) 1 - Chlamydomonas reinhardtii
           gi|2959712|gb|AAC05639.1| cyclophilin 1 [Chlamydomonas
           reinhardtii]
          Length = 172

 Score =  351 bits (900), Expect = 4e-96
 Identities = 166/167 (99%), Positives = 166/167 (99%)
 Frame = +2

Query: 44  MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 223
           MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF
Sbjct: 1   MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 60

Query: 224 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF 403
           HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF 120

Query: 404 LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIAD 544
           LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRAT AIAD
Sbjct: 121 LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATFAIAD 167

>gb|AAN31483.1| peptidylprolyl isomerase [Phytophthora infestans]
          Length = 171

 Score =  289 bits (740), Expect = 1e-77
 Identities = 133/167 (79%), Positives = 147/167 (87%)
 Frame = +2

Query: 44  MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 223
           MPNP VFFD+T  GAP GRI  EL+AD VPKTAENFRALCTGEKGVGRSGKPLHFKGS+F
Sbjct: 1   MPNPQVFFDMTVGGAPAGRITFELFADKVPKTAENFRALCTGEKGVGRSGKPLHFKGSSF 60

Query: 224 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF 403
           HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENF  +H G G+LSMANAGPNTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFLLKHKGEGILSMANAGPNTNGSQFF 120

Query: 404 LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIAD 544
           +CTVET+WLDGKHVVFG+V  GMDVVK +E  GS SG+T+  + +A+
Sbjct: 121 ICTVETSWLDGKHVVFGRVVDGMDVVKNIESVGSQSGQTKKPVVVAN 167

>gb|AAC47125.1| cyclophilin
          Length = 171

 Score =  285 bits (730), Expect = 2e-76
 Identities = 135/167 (80%), Positives = 145/167 (85%)
 Frame = +2

Query: 44  MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 223
           M  P VFFDIT  G P GRI MELY D VPKTAENFRALCTGEKGVG+SGKPLHFKGS F
Sbjct: 1   MSRPRVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKF 60

Query: 224 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF 403
           HR+IP FM QGGDFTRGNGTGGESIYGEKFPDENFK +HTGPGVLSMANAGPNTNGSQFF
Sbjct: 61  HRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFF 120

Query: 404 LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIAD 544
           LCTV+TAWLDGKHVVFG+V +G+D+V KVEG GSSSG  ++   IAD
Sbjct: 121 LCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIAD 167

>ref|NP_506749.1| CYcloPhilin (18.4 kD) (cyp-7) [Caenorhabditis elegans]
           gi|10720390|sp|P52015|CYP7_CAEEL Peptidyl-prolyl
           cis-trans isomerase 7 (PPIase) (Rotamase)
           (Cyclophilin-7) gi|7510460|pir||T27371 peptidylprolyl
           isomerase (EC 5.2.1.8) Y75B12B.2 [similarity] -
           Caenorhabditis elegans gi|3881310|emb|CAA21760.1| C.
           elegans CYP-7 protein (corresponding sequence Y75B12B.2)
           [Caenorhabditis elegans]
          Length = 171

 Score =  285 bits (729), Expect = 3e-76
 Identities = 135/167 (80%), Positives = 145/167 (85%)
 Frame = +2

Query: 44  MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 223
           M  P VFFDIT  G P GRI MELY D VPKTAENFRALCTGEKGVG+SGKPLHFKGS F
Sbjct: 1   MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKF 60

Query: 224 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF 403
           HR+IP FM QGGDFTRGNGTGGESIYGEKFPDENFK +HTGPGVLSMANAGPNTNGSQFF
Sbjct: 61  HRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFF 120

Query: 404 LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIAD 544
           LCTV+TAWLDGKHVVFG+V +G+D+V KVEG GSSSG  ++   IAD
Sbjct: 121 LCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIAD 167

>emb|CAC81066.1| putative cyclosporin A-binding protein [Picea abies]
          Length = 172

 Score =  281 bits (719), Expect = 4e-75
 Identities = 129/167 (77%), Positives = 145/167 (86%)
 Frame = +2

Query: 44  MPNPIVFFDITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTF 223
           M NP VFFD+   GAP GRI MELYAD VPKTAENFRALCTGE+G GRSGKPLHFK STF
Sbjct: 1   MSNPKVFFDMQVGGAPAGRIVMELYADVVPKTAENFRALCTGERGTGRSGKPLHFKSSTF 60

Query: 224 HRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFF 403
           HRVIP FMCQGGDFTRGNGTGGESIYGEKF DENF  +HTGPG+LSMANAGPNTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTRGNGTGGESIYGEKFADENFARKHTGPGILSMANAGPNTNGSQFF 120

Query: 404 LCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIAD 544
           +CT +T+WLDGKHVVFG+V +G+DVV+++E  GS SG+T   ++IAD
Sbjct: 121 ICTAQTSWLDGKHVVFGQVVEGLDVVREIEKVGSGSGRTSKPVSIAD 167



EST assemble image


clone accession position
1 LCL053f10_r AV629174 1 476
2 HC027a03_r AV633924 16 544
3 MXL021h05_r BP094357 16 325




Chlamydomonas reinhardtii
Kazusa DNA Research Institute