KCC001911A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001911A_C01 KCC001911A_c01
TGGACGTTGACACGGAGACCGACTGATACCTTGTCCACGTTTCTGCATCCAAGTAAAATT
ACTATTGGAAGCGTTAATCAAGGAGATTAGTCTGAAGCAAGAGTCCGAACTTTACACCTC
TTTACATCGCCGCTCGCGTGGATTCCGCTGCTCTGGTTTGCTGCTGAGGCCTCAGCTCAA
CGCGGAGTGGCGCCAAGCTAAATGGTTTGCCAGGCCTGTGAAAAGAAGCTATCAAAGGTT
GCCTGCCCGGAAAAGTGGCGGGACAGCAAGGGTGATAAGCAGGGCGAGAGCAGCGGGCGC
AAGGTCAACGAGAACAAGTTGCTCACAGGGGCAAAACGATACCAACCATACACCAAGAAA
TGCAAGACGTGCAAACAGAACCTGCACCAAGACGGCCTGTACTGCCAGGCCTGCGCCTAC
GCTAAAGGCCTATGCTCCATGTGCGGGAAGCAGATGCTGGATGTAACCAAGTACAAGCAG
AGTGCGCAGTAGGGCCGTGCTGGGTATGATGGCGGGATGCGCGCCCGCCAGGTTACCCGT
TGCCTGTATGTTGGTCACTGGTTGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001911A_C01 KCC001911A_c01
         (566 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_176371.1| postsynaptic protein CRIPT -related [Arabidopsi...   123  2e-27
ref|NP_063972.1| postsynaptic protein CRIPT [Rattus norvegicus] ...   107  9e-23
ref|NP_054890.1| postsynaptic protein CRIPT; HSPC139 protein [Ho...   106  2e-22
ref|XP_311435.1| ENSANGP00000018599 [Anopheles gambiae] gi|21294...   105  4e-22
dbj|BAB23596.1| unnamed protein product [Mus musculus]                103  2e-21

>ref|NP_176371.1| postsynaptic protein CRIPT -related [Arabidopsis thaliana]
           gi|25404350|pir||F96643 hypothetical protein T13M11.14
           [imported] - Arabidopsis thaliana
           gi|4508078|gb|AAD21422.1| 64134
           gi|13926172|gb|AAK49568.1|AF370560_1 Very similar
           postsynaptic protein, CRIPT [Arabidopsis thaliana]
           gi|21618078|gb|AAM67128.1| postsynaptic protein CRIPT,
           putative [Arabidopsis thaliana]
           gi|26452640|dbj|BAC43403.1| unknown protein [Arabidopsis
           thaliana]
          Length = 98

 Score =  123 bits (309), Expect = 2e-27
 Identities = 57/97 (58%), Positives = 68/97 (69%), Gaps = 3/97 (3%)
 Frame = +1

Query: 202 MVCQACEKKLSKVACPEKWRDSKGDKQGESSGRKVNENKLLTGAKRYQPY---TKKCKTC 372
           MVC  CEKKLSKV  P+KW+D   +   E  GRK+NENKLL+   R+ PY   T KC  C
Sbjct: 1   MVCDKCEKKLSKVIVPDKWKDGARNVT-EGGGRKINENKLLSKKNRWSPYSTCTTKCMIC 59

Query: 373 KQNLHQDGLYCQACAYAKGLCSMCGKQMLDVTKYKQS 483
           KQ +HQDG YC  CAY+KG+C+MCGKQ+LD   YKQS
Sbjct: 60  KQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKMYKQS 96

>ref|NP_063972.1| postsynaptic protein CRIPT [Rattus norvegicus]
           gi|9910166|ref|NP_064320.1| postsynaptic protein Cript;
           CRIPT protein [Mus musculus] gi|3098551|gb|AAC40102.1|
           postsynaptic protein CRIPT [Rattus norvegicus]
           gi|5020268|gb|AAD38045.1|AF151637_1 CRIPT protein [Mus
           musculus] gi|12842756|dbj|BAB25719.1| unnamed protein
           product [Mus musculus] gi|18605835|gb|AAH23013.1|
           Postsynaptic protein Cript [Mus musculus]
           gi|26325368|dbj|BAC26438.1| unnamed protein product [Mus
           musculus]
          Length = 101

 Score =  107 bits (268), Expect = 9e-23
 Identities = 52/101 (51%), Positives = 68/101 (66%), Gaps = 6/101 (5%)
 Frame = +1

Query: 202 MVCQACEKKLSKVACPEKWRDSKGDKQGESSGRKVNENKLLTGAK-RYQPYTKK----CK 366
           MVC+ CEKKL +V  P+ W+D   +   ES GRK+NENK LT  K R+ PY K     C+
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTT-ESGGRKLNENKALTSKKARFDPYGKNKFSTCR 59

Query: 367 TCKQNLHQDGL-YCQACAYAKGLCSMCGKQMLDVTKYKQSA 486
            CK ++HQ G  YCQ CAY KG+C+MCGK++LD   YKQ++
Sbjct: 60  ICKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

>ref|NP_054890.1| postsynaptic protein CRIPT; HSPC139 protein [Homo sapiens]
           gi|6841500|gb|AAF29103.1|AF161488_1 HSPC139 [Homo
           sapiens] gi|13937765|gb|AAH06980.1| Postsynaptic protein
           CRIPT [Homo sapiens] gi|17391441|gb|AAH18653.1|
           Postsynaptic protein CRIPT [Homo sapiens]
          Length = 101

 Score =  106 bits (265), Expect = 2e-22
 Identities = 52/101 (51%), Positives = 67/101 (65%), Gaps = 6/101 (5%)
 Frame = +1

Query: 202 MVCQACEKKLSKVACPEKWRDSKGDKQGESSGRKVNENKLLTGAK-RYQPYTKK----CK 366
           MVC+ CEKKL  V  P+ W+D   +   ES GRK+NENK LT  K R+ PY K     C+
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTT-ESGGRKLNENKALTSKKARFDPYGKNKFSTCR 59

Query: 367 TCKQNLHQDGL-YCQACAYAKGLCSMCGKQMLDVTKYKQSA 486
            CK ++HQ G  YCQ CAY KG+C+MCGK++LD   YKQ++
Sbjct: 60  ICKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

>ref|XP_311435.1| ENSANGP00000018599 [Anopheles gambiae] gi|21294912|gb|EAA07057.1|
           ENSANGP00000018599 [Anopheles gambiae str. PEST]
          Length = 105

 Score =  105 bits (262), Expect = 4e-22
 Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 5/100 (5%)
 Frame = +1

Query: 202 MVCQACEKKLSKVACPEKWRDSKGDKQGESSGRKVNENKLLTGAK-RYQPYTKK---CKT 369
           MVC+ CEKKL KV  P+ W+    +   E  GRK+NENK L+ AK RY P       C+ 
Sbjct: 6   MVCEKCEKKLGKVITPDPWKAGARNTT-EGGGRKINENKALSSAKARYNPMAGNFAPCRI 64

Query: 370 CKQNLHQDGL-YCQACAYAKGLCSMCGKQMLDVTKYKQSA 486
           CKQ +HQ G  YCQ CAY KG+C+MCGK++LDV  Y+QS+
Sbjct: 65  CKQKIHQAGSHYCQQCAYKKGICAMCGKKLLDVKNYRQSS 104

>dbj|BAB23596.1| unnamed protein product [Mus musculus]
          Length = 101

 Score =  103 bits (257), Expect = 2e-21
 Identities = 51/101 (50%), Positives = 67/101 (65%), Gaps = 6/101 (5%)
 Frame = +1

Query: 202 MVCQACEKKLSKVACPEKWRDSKGDKQGESSGRKVNENKLLTGAK-RYQPYTKK----CK 366
           MVC+ CEKKL +V  P+ W+D   +   ES GRK+NENK LT  K R+ PY K     C+
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTT-ESGGRKLNENKALTSKKARFDPYGKNKFSTCR 59

Query: 367 TCKQNLHQDGL-YCQACAYAKGLCSMCGKQMLDVTKYKQSA 486
            CK ++HQ G  YCQ CAY KG+C+M GK++LD   YKQ++
Sbjct: 60  ICKSSVHQPGSHYCQGCAYKKGICAMYGKKVLDTKNYKQTS 100



EST assemble image


clone accession position
1 MX013h07_r BP086662 1 382
2 LC022h11_r AV620498 1 566
3 LC012e09_r AV619745 2 487
4 HC024a12_r AV633693 5 509
5 HC034d02_r AV634511 35 510




Chlamydomonas reinhardtii
Kazusa DNA Research Institute