Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001907A_C01 KCC001907A_c01
(549 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_341684.1| similar to TTAGGG repeat binding factor 2 [Ratt... 45 6e-04
ref|NP_887335.1| putative exported protein [Bordetella bronchise... 44 0.002
gb|AAH45463.1| Similar to proteasome (prosome, macropain) 26S su... 42 0.005
gb|AAK26125.1|AC084406_8 hypothetical protein [Oryza sativa] 42 0.005
gb|AAH46284.1| Similar to telomeric repeat binding factor 2 [Mus... 41 0.009
>ref|XP_341684.1| similar to TTAGGG repeat binding factor 2 [Rattus norvegicus]
Length = 536
Score = 45.1 bits (105), Expect = 6e-04
Identities = 30/78 (38%), Positives = 39/78 (49%), Gaps = 1/78 (1%)
Frame = +1
Query: 289 PAASGGRGTEGLQSEPHQVPEAEARRRAG*GADGGGDSDAAGRASG*RRAGRKAAKGGRQ 468
PA+ G + + S+P + P E RR+ A GGG SD GRA+ RRA R + R
Sbjct: 10 PASGPGVVRDPMASQPRKRPGGEGARRSNTMAGGGGSSDNGGRAAN-RRASRSGGRARRG 68
Query: 469 DLAPGFRESME-GAGATR 519
PG + E GAG R
Sbjct: 69 RHEPGLGGAAERGAGEAR 86
>ref|NP_887335.1| putative exported protein [Bordetella bronchiseptica]
gi|33567372|emb|CAE31285.1| putative exported protein
[Bordetella bronchiseptica]
Length = 199
Score = 43.5 bits (101), Expect = 0.002
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2
Query: 509 PAPSILSRKPGARSCRPPFAAFLPARRQPEARPAASLSPPPSAPHPALRRASA 351
PAP +L +P A S PP+AA AR P ARPA + +P PSA A+ A A
Sbjct: 47 PAPPVLP-EPAAASAPPPWAAGNRARPAPAARPAPAAAPAPSAREQAMAEAHA 98
>gb|AAH45463.1| Similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
[Danio rerio]
Length = 887
Score = 42.0 bits (97), Expect = 0.005
Identities = 32/95 (33%), Positives = 41/95 (42%), Gaps = 8/95 (8%)
Frame = +3
Query: 210 NRHRKWPSTPWRSICLPSTLKSLTAPTCGVWWAWHRRATK*TP--SSP------RSGSAS 365
N+ K P +RS C PSTL PT W RR + P S P R
Sbjct: 793 NKDLKMPKVQYRSNCKPSTL-----PTLHPWKCQRRRKRRRCPPPSCPSLLKPRRRRRRR 847
Query: 366 KSRMRSRWRRRQRCSRTSLRLTSRRQESGKRRTTR 470
K R R RW+ + R R T RR++ KRR ++
Sbjct: 848 KRRRRKRWKWKHRRRLRKRRKTRRRRKKRKRRKSQ 882
>gb|AAK26125.1|AC084406_8 hypothetical protein [Oryza sativa]
Length = 322
Score = 42.0 bits (97), Expect = 0.005
Identities = 27/63 (42%), Positives = 37/63 (57%), Gaps = 8/63 (12%)
Frame = -2
Query: 509 PAPSILSRKPGARSCRPP---FAAFLPARRQP--EARPAASLSPPP---SAPHPALRRAS 354
PAP ++ R+P R PP FAA + A +P RPA+ L PPP + P PA+ R+S
Sbjct: 46 PAPELVYRRPETRCGWPPSSSFAASIRAFGEPCFVLRPASELVPPPPRFTPPSPAVARSS 105
Query: 353 ASG 345
A+G
Sbjct: 106 ATG 108
>gb|AAH46284.1| Similar to telomeric repeat binding factor 2 [Mus musculus]
Length = 470
Score = 41.2 bits (95), Expect = 0.009
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = +1
Query: 289 PAASGGRGTEGLQSEPHQVPE------AEARRRAG*GADGGGDSDAAGRASG*RRAGRKA 450
PA+ G + + S+P + P E RR+ A GGG SD++GRA+ RRA R
Sbjct: 10 PASGPGVVRDPMASQPRKRPSREGGEGGEGERRSNTMAGGGGSSDSSGRAAS-RRASRSG 68
Query: 451 AKGGRQDLAPGFRESME-GAGATR 519
+ R PG + E GAG R
Sbjct: 69 GRARRGRHEPGLGGAAERGAGEAR 92
