KCC001902A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001902A_C01 KCC001902A_c01
CGACCATGCTCGACCTGGACTTCGGCACCTACCCCTACGTCACCTCATCCAACCCCTCCA
TTGGCGGCATCGCCACCGGCCTGGGCCTGCCGCCGTCCTCGTACGACGACATCGTGGGCG
TGGCCAAGGCCTACACCACGCGTGTGGGCGCCGGCCCCTACCCCACTGAAATCCACGGCA
AGCTGGCAGAGGACCTGCGCGCGGTGGGCCACGAGTACGGCACCACCACCGGCCGCCCGC
GCCGCATCGGCTGGATGGACATTGTGGCGCTGCGCTACGCCTGCAAGATCAACGGCGTGA
CCCATATCAACCTCACCAAGCTGGACGTGCTGGACAACCTGGAGGAGATCCAGGTCGGCG
TCGGCTACAAGACCAAGGAGGGCAAGATGCTCAAGTCGGTGCCCGCGGACCTGCACACGT
TGGAAAACGTGGCGGTGGTGTACGAGACGCTACCCGGCTGGCAGGCCGACATCAGCGCCG
CGCGCCAGTGGGCCCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001902A_C01 KCC001902A_c01
         (497 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO38451.1| putative adenylosuccinate synthetase [Oryza sativ...   224  6e-58
sp|O24578|PURA_MAIZE Adenylosuccinate synthetase, chloroplast pr...   220  8e-57
gb|AAG01122.1|AF273333_7 BAC19.7 [Lycopersicon esculentum]            218  3e-56
sp|O24396|PURA_WHEAT Adenylosuccinate synthetase, chloroplast pr...   218  4e-56
pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase Fr...   218  4e-56

>gb|AAO38451.1| putative adenylosuccinate synthetase [Oryza sativa (japonica
           cultivar-group)]
          Length = 489

 Score =  224 bits (570), Expect = 6e-58
 Identities = 102/164 (62%), Positives = 132/164 (80%)
 Frame = +3

Query: 3   TMLDLDFGTYPYVTSSNPSIGGIATGLGLPPSSYDDIVGVAKAYTTRVGAGPYPTEIHGK 182
           TMLD+DFGTYP+VTSS+PS GGI TGLG+ P S  D++GV KAYTTRVG+GP+PTE+ GK
Sbjct: 290 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRSIGDLIGVVKAYTTRVGSGPFPTELLGK 349

Query: 183 LAEDLRAVGHEYGTTTGRPRRIGWMDIVALRYACKINGVTHINLTKLDVLDNLEEIQVGV 362
             + LRA G E+GTTTGRPRR GW+DIVAL+Y C+ING + +NLTKLDVL  L+E+++G+
Sbjct: 350 TGDLLRASGMEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLTGLKEVKLGI 409

Query: 363 GYKTKEGKMLKSVPADLHTLENVAVVYETLPGWQADISAARQWA 494
            Y T++GK ++S PADL  LE + V YE LPGW+ DIS+ R ++
Sbjct: 410 AYCTEDGKEIESFPADLDLLEKIKVKYEVLPGWEDDISSVRNYS 453

>sp|O24578|PURA_MAIZE Adenylosuccinate synthetase, chloroplast precursor (IMP--aspartate
           ligase) (AdSS) (AMPSase) gi|7438030|pir||T03984
           adenylosuccinate synthase (EC 6.3.4.4) - maize
           gi|1616661|gb|AAB16830.1| adenylosuccinate synthetase
          Length = 484

 Score =  220 bits (560), Expect = 8e-57
 Identities = 101/163 (61%), Positives = 130/163 (78%)
 Frame = +3

Query: 3   TMLDLDFGTYPYVTSSNPSIGGIATGLGLPPSSYDDIVGVAKAYTTRVGAGPYPTEIHGK 182
           TMLD+DFGTYP+VTSS+PS GGI TGLG+ P +  D++GV KAYT+RVG+GP+PTE+ G+
Sbjct: 285 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRAIGDLIGVVKAYTSRVGSGPFPTELFGE 344

Query: 183 LAEDLRAVGHEYGTTTGRPRRIGWMDIVALRYACKINGVTHINLTKLDVLDNLEEIQVGV 362
             + LR  G E+GTTTGRPRR GW+DIVAL+++C+ING + +NLTKLDVL  L EI+VGV
Sbjct: 345 EGDRLRKAGMEFGTTTGRPRRCGWLDIVALKHSCQINGFSSLNLTKLDVLSGLSEIKVGV 404

Query: 363 GYKTKEGKMLKSVPADLHTLENVAVVYETLPGWQADISAARQW 491
            Y   +G+ L+S P DL TLE V V YE LPGWQ+DIS+ R++
Sbjct: 405 SYTQTDGQKLQSFPGDLDTLEQVQVNYEVLPGWQSDISSVRRY 447

>gb|AAG01122.1|AF273333_7 BAC19.7 [Lycopersicon esculentum]
          Length = 581

 Score =  218 bits (555), Expect = 3e-56
 Identities = 102/164 (62%), Positives = 128/164 (77%)
 Frame = +3

Query: 3   TMLDLDFGTYPYVTSSNPSIGGIATGLGLPPSSYDDIVGVAKAYTTRVGAGPYPTEIHGK 182
           TMLD+DFGTYP+VTSS+PS GGI TGLG+ P    D+VGV KAYTTRVG+GP+PTEI GK
Sbjct: 301 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPKVVGDLVGVVKAYTTRVGSGPFPTEIMGK 360

Query: 183 LAEDLRAVGHEYGTTTGRPRRIGWMDIVALRYACKINGVTHINLTKLDVLDNLEEIQVGV 362
             + LR  G E+GTTTGRPRR GW+DIVAL++ C+ING   +NLTKLDVL +L EIQ+GV
Sbjct: 361 GGDLLRFAGQEFGTTTGRPRRCGWLDIVALKFCCQINGFASLNLTKLDVLSDLPEIQLGV 420

Query: 363 GYKTKEGKMLKSVPADLHTLENVAVVYETLPGWQADISAARQWA 494
            Y+  +G  L S P+DL  LE + V YE LPGW++DIS+ R+++
Sbjct: 421 TYRHPDGSALHSFPSDLRLLEQIKVEYEVLPGWKSDISSIRKYS 464

>sp|O24396|PURA_WHEAT Adenylosuccinate synthetase, chloroplast precursor (IMP--aspartate
           ligase) (AdSS) (AMPSase) gi|7438028|pir||T06792
           adenylosuccinate synthase (EC 6.3.4.4) - wheat
           (fragment) gi|1616659|gb|AAB16829.1| adenylosuccinate
           synthetase
          Length = 476

 Score =  218 bits (554), Expect = 4e-56
 Identities = 101/165 (61%), Positives = 127/165 (76%)
 Frame = +3

Query: 3   TMLDLDFGTYPYVTSSNPSIGGIATGLGLPPSSYDDIVGVAKAYTTRVGAGPYPTEIHGK 182
           TMLD+DFGTYP+VTSS+PS GGI TGLG+ P    D++GV KAYTTRVG+GP+PTE+ G+
Sbjct: 277 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELLGE 336

Query: 183 LAEDLRAVGHEYGTTTGRPRRIGWMDIVALRYACKINGVTHINLTKLDVLDNLEEIQVGV 362
             + LR  G E+GTTTGRPRR GW+DIVAL+Y C ING + +NLTKLDVL  L EI++GV
Sbjct: 337 EGDVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGV 396

Query: 363 GYKTKEGKMLKSVPADLHTLENVAVVYETLPGWQADISAARQWAQ 497
            Y   +G+ L+S P DL TLE V V YE LPGW +DIS+ R +++
Sbjct: 397 SYNQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSE 441

>pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum
           Aestivum And Arabidopsis Thaliana gi|7546405|pdb|1DJ3|B
           Chain B, Structures Of Adenylosuccinate Synthetase From
           Triticum Aestivum And Arabidopsis Thaliana
          Length = 442

 Score =  218 bits (554), Expect = 4e-56
 Identities = 101/165 (61%), Positives = 127/165 (76%)
 Frame = +3

Query: 3   TMLDLDFGTYPYVTSSNPSIGGIATGLGLPPSSYDDIVGVAKAYTTRVGAGPYPTEIHGK 182
           TMLD+DFGTYP+VTSS+PS GGI TGLG+ P    D++GV KAYTTRVG+GP+PTE+ G+
Sbjct: 243 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELLGE 302

Query: 183 LAEDLRAVGHEYGTTTGRPRRIGWMDIVALRYACKINGVTHINLTKLDVLDNLEEIQVGV 362
             + LR  G E+GTTTGRPRR GW+DIVAL+Y C ING + +NLTKLDVL  L EI++GV
Sbjct: 303 EGDVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGV 362

Query: 363 GYKTKEGKMLKSVPADLHTLENVAVVYETLPGWQADISAARQWAQ 497
            Y   +G+ L+S P DL TLE V V YE LPGW +DIS+ R +++
Sbjct: 363 SYNQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSE 407



EST assemble image


clone accession position
1 HC021b04_r AV633464 1 582
2 HCL036h05_r AV641588 223 601




Chlamydomonas reinhardtii
Kazusa DNA Research Institute