Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001894A_C01 KCC001894A_c01
(490 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_739303.1| hypothetical protein [Corynebacterium efficiens... 35 0.37
sp|Q9PU36|PCLO_CHICK Piccolo protein (Aczonin) gi|6433844|emb|CA... 35 0.37
gb|AAD42897.1|AF160187_1 pharyngeal enhancer binding protein-1 [... 35 0.64
ref|NP_508408.1| pharyngeal Enhancer Binding PEB-1, pharyngeal e... 35 0.64
dbj|BAC87644.1| unnamed protein product [Homo sapiens] 34 1.1
>ref|NP_739303.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494537|dbj|BAC19503.1| hypothetical protein
[Corynebacterium efficiens YS-314]
Length = 436
Score = 35.4 bits (80), Expect = 0.37
Identities = 16/36 (44%), Positives = 18/36 (49%)
Frame = +2
Query: 44 PQAPHCPSTAQRTAAGVRALRAQTSITPPPHHQPSA 151
PQ PH P+ RT G L+ PPP H PSA
Sbjct: 17 PQPPHRPTAGARTRTGCIQLQGMGHGVPPPGHHPSA 52
>sp|Q9PU36|PCLO_CHICK Piccolo protein (Aczonin) gi|6433844|emb|CAB60725.1| aczonin
[Gallus gallus]
Length = 5120
Score = 35.4 bits (80), Expect = 0.37
Identities = 33/101 (32%), Positives = 45/101 (43%), Gaps = 14/101 (13%)
Frame = +2
Query: 29 VSNCTPQA-PHCPSTAQRTAAGVRALRAQTSITPPPHHQPS----AITVQALTVHPCFA- 190
V PQA P PS+ +TA ++L Q +T PP QP QA T P +
Sbjct: 305 VKQVPPQAGPTKPSS--QTAGAAKSLAQQPGLTKPPGQQPGPEKPLQQKQASTTQPVEST 362
Query: 191 -RRTTCSLSTTTHIKM-------THLCTRACSRV*CCWCFF 289
++T C L TTT + + + CT+ C V C C F
Sbjct: 363 PKKTFCPLCTTTELLLHTPEKANYNTCTQ-CHTVVCSLCGF 402
>gb|AAD42897.1|AF160187_1 pharyngeal enhancer binding protein-1 [Caenorhabditis elegans]
Length = 425
Score = 34.7 bits (78), Expect = 0.64
Identities = 27/88 (30%), Positives = 37/88 (41%), Gaps = 4/88 (4%)
Frame = +2
Query: 26 SVSNCTPQAPHCPSTAQRTAAGVRALRAQTSITPPPHHQPSAITVQALTVHPCFARRTTC 205
SVS+ TPQ P S A V L+ + P + Q S + A + P A +
Sbjct: 327 SVSSFTPQMPKEASIAIPAPLQVLNLKDLKPLPPLANIQTSPVIQAANLLLPVAALKKDS 386
Query: 206 SLSTTTHIKMTHLCTRACS----RV*CC 277
S TT IK++ T C R+ CC
Sbjct: 387 STQTTEEIKVSQCLTSGCGCRVIRICCC 414
>ref|NP_508408.1| pharyngeal Enhancer Binding PEB-1, pharyngeal enhancer binding like
(47.2 kD) (peb-1) [Caenorhabditis elegans]
gi|7507831|pir||T29376 hypothetical protein T14F9.4 -
Caenorhabditis elegans gi|1213553|gb|AAA91262.1|
Pharyngeal enhancer binding protein 1, isoform a
[Caenorhabditis elegans]
Length = 427
Score = 34.7 bits (78), Expect = 0.64
Identities = 27/88 (30%), Positives = 37/88 (41%), Gaps = 4/88 (4%)
Frame = +2
Query: 26 SVSNCTPQAPHCPSTAQRTAAGVRALRAQTSITPPPHHQPSAITVQALTVHPCFARRTTC 205
SVS+ TPQ P S A V L+ + P + Q S + A + P A +
Sbjct: 329 SVSSFTPQMPKEASIAIPAPLQVLNLKDLKPLPPLANIQTSPVIQAANLLLPVAALKKDS 388
Query: 206 SLSTTTHIKMTHLCTRACS----RV*CC 277
S TT IK++ T C R+ CC
Sbjct: 389 STQTTEEIKVSQCLTSGCGCRVIRICCC 416
>dbj|BAC87644.1| unnamed protein product [Homo sapiens]
Length = 573
Score = 33.9 bits (76), Expect = 1.1
Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = -1
Query: 301 SCLEEETPTTSDS*TSTSTQMCHLNVCGGTERAGCTPCEAGVHR*RLDCNC*G--LVVWR 128
SC+ E P + L VCG TE AGC E V R C L V R
Sbjct: 173 SCMSGELPVWRVT-EGAGRMSGELAVCGVTEGAGCMSGELAVCRVTEGAGCMSGELAVCR 231
Query: 127 WSDGGLGTQGPHTRSRPLSGRGAVWG---LWSAVAHGANCNAG 8
++G G T R G G + G +W V GA C +G
Sbjct: 232 VTEGAGCMSGELTVCRVTEGAGCMSGELAVW-RVTEGAGCMSG 273
