Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001893A_C01 KCC001893A_c01
(914 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_147539.1| hypothetical protein [Aeropyrum pernix] gi|7516... 47 6e-04
ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium vi... 44 0.004
dbj|BAC35321.1| unnamed protein product [Mus musculus] 42 0.014
gb|AAH03765.1| Unknown (protein for IMAGE:3599536) [Mus musculus] 42 0.014
ref|ZP_00092392.1| COG0642: Signal transduction histidine kinase... 42 0.014
>ref|NP_147539.1| hypothetical protein [Aeropyrum pernix] gi|7516066|pir||A72678
hypothetical protein APE0845 - Aeropyrum pernix (strain
K1) gi|5104510|dbj|BAA79825.1| 128aa long hypothetical
protein [Aeropyrum pernix]
Length = 128
Score = 46.6 bits (109), Expect = 6e-04
Identities = 43/132 (32%), Positives = 52/132 (38%), Gaps = 26/132 (19%)
Frame = -1
Query: 851 LSAAPPESPAACATQSRSRPSATAPETTPPIPVPTCRPYGCRARRDVC------------ 708
++A+ +SP +R R S T TT P P P G + + C
Sbjct: 1 MAASRQDSPCTSTRWARPRGSCTCSSTTYPYPAPCGTSSGASSPQPPCKRCPPSSPTGPG 60
Query: 707 GRAAMRRRR----RRYRGK----------PQG*PRGRVRRSASRPWGGARAPCPGLRAWP 570
GR RR R RR RGK P G G SA RP PCPG P
Sbjct: 61 GRGRPRRSRPGRWRRRRGKLCPGSPRSSGPGGPLSGPGVGSARRP-----RPCPGRSCRP 115
Query: 569 CSRRGKRSLSGC 534
CSRRG + +GC
Sbjct: 116 CSRRGTPA-TGC 126
>ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium violaceum ATCC 12472]
gi|34103761|gb|AAQ60122.1| hypothetical protein CV2451
[Chromobacterium violaceum ATCC 12472]
Length = 247
Score = 43.9 bits (102), Expect = 0.004
Identities = 51/153 (33%), Positives = 64/153 (41%), Gaps = 34/153 (22%)
Frame = -1
Query: 890 KPRSADVKPC--PAALSAAPPESPAACATQSRSRP----SATAPETTPPIPVPTCRPYG- 732
+P + +V+P PAA A S C T R+ P SA A ++P PTCR +
Sbjct: 2 RPPAGEVRPDRGPAAAPAGTAPSRRGCRTGLRTGPASPASAPASPSSPNAADPTCRLWRW 61
Query: 731 -----------CRAR---------RDVCGRAAMRR-RRRRYRGKPQG*PRGRVRRSASRP 615
CR R R C A RR R RR G + PR RRS +
Sbjct: 62 CRLPGRRIRSICRRRPSQPPGPRNRSPCRTARSRRWRCRRRAGAARALPR---RRSGA-- 116
Query: 614 WGGARAPCPGLRAWP---CS---RRGKRSLSGC 534
G+R PG WP CS RR +RS +GC
Sbjct: 117 --GSRPAAPG--CWPRTDCSRARRRSRRSAAGC 145
>dbj|BAC35321.1| unnamed protein product [Mus musculus]
Length = 222
Score = 42.0 bits (97), Expect = 0.014
Identities = 44/139 (31%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Frame = -1
Query: 860 PAALSAAPPESPAACATQSRSRPSATAPETTPPIPVPTCR-PYGCRARRDVCGRAAMRRR 684
P ++A P +A + S P AT P P P+P R P RRD CG A R
Sbjct: 21 PGRVAAPSPGGSSAAGVRRASSP-ATHPRPARPAPLPCPRLPARLFNRRDECGHGARARL 79
Query: 683 RRRYRGKPQG*PRGRVRRSASRPWGGARAPCPGLRAWPCSRRGKRSLSGCG*SAVPGLGL 504
R G+ G P +RR +R CP + R S S C AV G+
Sbjct: 80 EERESGRGAG-PGAELRRPQTR-LPAVATGCPSV-----PRTATASASSCT-GAVTWDGV 131
Query: 503 PVSDYCSGGYCRSGDMAGC 447
VS S C AGC
Sbjct: 132 TVSGAASA--CCRPPAAGC 148
>gb|AAH03765.1| Unknown (protein for IMAGE:3599536) [Mus musculus]
Length = 264
Score = 42.0 bits (97), Expect = 0.014
Identities = 67/215 (31%), Positives = 79/215 (36%), Gaps = 11/215 (5%)
Frame = -1
Query: 914 LRLHPA*QKPRSADVKPCPAALSAAPPESPAACATQSRSRPSATAPETTPPIPVPTCRPY 735
L L P Q P P PAA A P PA+ SRS TA T P +P
Sbjct: 19 LALDPRGQSPGRP---PLPAACPAHLPGKPASSRPGSRSPSKGTACGTAPELPAA----- 70
Query: 734 GCRARRDVCGRAAMRRRRRRYRGKPQG*PRGRVRRSASRPWG--GARAPCPGLRAWPCSR 561
G R+ A R R P G P V S +P GA +P PG P S
Sbjct: 71 GWTRSRERVSVAPPRER-------PAGIPITPVAGSPRQPQSLTGAESP-PGTPGPPDSP 122
Query: 560 RGKRSLSGCG*SAVP-GLG--LPVSDYCSGGYCRSGDMAGCTRRC------EPRLAPGYE 408
R SL+ A GL LP Y G R G+ GC + PRL G
Sbjct: 123 REGGSLAEALLKACQLGLAGCLPTPGY-RVGQTRYGEGCGCAGQLSPLSPDSPRLENGGS 181
Query: 407 AAMERSCRLVLGVLSRLVTAGGAAELSHHRCPAPS 303
+ +CRLV L G + R P+PS
Sbjct: 182 QSHHEACRLVWKALGGRDL--GIPRTALFRVPSPS 214
>ref|ZP_00092392.1| COG0642: Signal transduction histidine kinase [Azotobacter
vinelandii]
Length = 719
Score = 42.0 bits (97), Expect = 0.014
Identities = 35/105 (33%), Positives = 37/105 (34%)
Frame = -1
Query: 884 RSADVKPCPAALSAAPPESPAACATQSRSRPSATAPETTPPIPVPTCRPYGCRARRDVCG 705
RSAD P A P P A R RP AP TPP P P R R G
Sbjct: 149 RSADPPPA----HARRPHRPVAGRRADRLRPLQPAPRRTPPAPRRRRHPADQRRVRPAPG 204
Query: 704 RAAMRRRRRRYRGKPQG*PRGRVRRSASRPWGGARAPCPGLRAWP 570
R R R + PR R R + AP PG R P
Sbjct: 205 PGPPPRAAARPRPADRAEPRPRPRGQRPQHRRAGHAPAPGDRGRP 249
Score = 35.8 bits (81), Expect = 1.0
Identities = 45/156 (28%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Frame = +1
Query: 262 PATSRTRQLTQSYELGAGHLWWDSSAAPPAVTSLDKTPRTSRQDRSIAASYPGASR---- 429
P R R Q+++ S+ PPA P R+ + P R
Sbjct: 127 PGDGRRRLPAQAFQSARAAGAHRSADPPPAHARRPHRPVAGRRADRLRPLQPAPRRTPPA 186
Query: 430 -------GSQRRVQPAISPLRQ*PPEQ*SLTGRPSPGTADHPHPLRLRFPRREHGQARNP 588
QRRV+PA P PP + + RP+ P P R R G A P
Sbjct: 187 PRRRRHPADQRRVRPAPGPG---PPPRAAARPRPADRAEPRPRPRGQRPQHRRAGHAPAP 243
Query: 589 GQ----GARAPPQGRL-ADLRTRPRGYPCGLPRYRL 681
G GA A RL A LR R R + G P RL
Sbjct: 244 GDRGRPGAAALHPDRLGAGLRARAR-WRRGAPAMRL 278
Score = 33.1 bits (74), Expect = 6.7
Identities = 26/79 (32%), Positives = 34/79 (42%), Gaps = 7/79 (8%)
Frame = +1
Query: 373 PRTSRQDRSIAASYPGASRGSQRRVQPA--ISPLRQ*PPEQ*SLTG-----RPSPGTADH 531
PRT+ R+ PG + G +RR PA + L Q P L G RP+PG
Sbjct: 22 PRTATDGRNEDGRSPGENSGGRRRAGPARPAATLSQRP----GLCGPRPGRRPAPGAPAR 77
Query: 532 PHPLRLRFPRREHGQARNP 588
P LR RR+ + P
Sbjct: 78 PRALRRAGARRDDARRGRP 96
