Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001889A_C01 KCC001889A_c01
(612 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P52427|PSA4_SPIOL Proteasome subunit alpha type 4 (20S protea... 244 5e-64
ref|NP_188850.1| 20S proteasome alpha subunit C (PAC1) [Arabidop... 243 1e-63
emb|CAA73624.1| multicatalytic endopeptidase [Arabidopsis thaliana] 242 3e-63
sp|Q9LE92|PSA4_ORYSA Proteasome subunit alpha type 4 (20S protea... 236 1e-61
dbj|BAA78755.1| ESTs AU058081(E30812),AU058365(E50679), AU030138... 236 1e-61
>sp|P52427|PSA4_SPIOL Proteasome subunit alpha type 4 (20S proteasome alpha subunit C)
(20S proteasome subunit alpha-3) (Proteasome 27 kDa
subunit) gi|7435866|pir||T09160 proteasome subunit -
spinach gi|1262146|emb|CAA65660.1| proteasome subunit
[Spinacia oleracea]
Length = 250
Score = 244 bits (624), Expect = 5e-64
Identities = 118/151 (78%), Positives = 135/151 (89%)
Frame = +3
Query: 156 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHA 335
MSRRYDSRTTIFSPEGRLYQVEYAMEAI NAG++IG+LAKDGVVLI EKK+TSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQT-- 58
Query: 336 VGVRREKMYRIDNHIACSVAGITADANILINTCRLAAQRYLFAYQEPMPVEQLVRTVCDT 515
EKMY+ID+H+AC+VAGI +DANILINT R+ AQRY F+YQEPMPVEQLV+++CDT
Sbjct: 59 -STSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDT 117
Query: 516 KQGYTQFGGQRPFGVSLLYAGWDEHYGFQLY 608
KQGYTQFGG RPFGVS L+AGWD++YGFQLY
Sbjct: 118 KQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 148
>ref|NP_188850.1| 20S proteasome alpha subunit C (PAC1) [Arabidopsis thaliana]
gi|12643237|sp|O81148|PSA4_ARATH Proteasome subunit
alpha type 4 (20S proteasome alpha subunit C)
(Proteasome 27 kDa subunit) gi|25290058|pir||T51969 20S
proteasome subunit PAC1 [imported] - Arabidopsis
thaliana gi|3421077|gb|AAC32057.1| 20S proteasome
subunit PAC1 [Arabidopsis thaliana]
gi|11994731|dbj|BAB03060.1| 20S proteasome subunit PAC1
[Arabidopsis thaliana]
gi|14423432|gb|AAK62398.1|AF386953_1 20S proteasome
subunit PAC1 [Arabidopsis thaliana]
gi|21554045|gb|AAM63126.1| 20S proteasome subunit PAC1
[Arabidopsis thaliana] gi|23197586|gb|AAN15320.1| 20S
proteasome subunit PAC1 [Arabidopsis thaliana]
Length = 250
Score = 243 bits (621), Expect = 1e-63
Identities = 117/151 (77%), Positives = 134/151 (88%)
Frame = +3
Query: 156 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHA 335
MSRRYDSRTTIFSPEGRLYQVEYAMEAI NAG++IG+L+KDGVVLI EKK+TSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQT-- 58
Query: 336 VGVRREKMYRIDNHIACSVAGITADANILINTCRLAAQRYLFAYQEPMPVEQLVRTVCDT 515
EKMY+ID+H+AC+VAGI +DANILINT R+ AQRY F YQEPMPVEQLV+++CDT
Sbjct: 59 -STSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDT 117
Query: 516 KQGYTQFGGQRPFGVSLLYAGWDEHYGFQLY 608
KQGYTQFGG RPFGVS L+AGWD+H+GFQLY
Sbjct: 118 KQGYTQFGGLRPFGVSFLFAGWDKHHGFQLY 148
>emb|CAA73624.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 250
Score = 242 bits (617), Expect = 3e-63
Identities = 116/151 (76%), Positives = 133/151 (87%)
Frame = +3
Query: 156 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHA 335
MSRRYDSRTTIFSPEGRLYQVEY MEAI NAG++IG+L+KDGVVLI EKK+TSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYVMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQT-- 58
Query: 336 VGVRREKMYRIDNHIACSVAGITADANILINTCRLAAQRYLFAYQEPMPVEQLVRTVCDT 515
EKMY+ID+H+AC+VAGI +DANILINT R+ AQRY F YQEPMPVEQLV+++CDT
Sbjct: 59 -STSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDT 117
Query: 516 KQGYTQFGGQRPFGVSLLYAGWDEHYGFQLY 608
KQGYTQFGG RPFGVS L+AGWD+H+GFQLY
Sbjct: 118 KQGYTQFGGLRPFGVSFLFAGWDKHHGFQLY 148
>sp|Q9LE92|PSA4_ORYSA Proteasome subunit alpha type 4 (20S proteasome alpha subunit C)
(20S proteasome subunit alpha-3)
gi|8096319|dbj|BAA95822.1| ESTs
AU058081(E3082),AU075427(E30384) correspond to a region
of the predicted gene.~Similar to Spinacia oleracea
proteasome 27 kD subunit (P52427) [Oryza sativa
(japonica cultivar-group)] gi|8096329|dbj|BAA95832.1|
ESTs AU058081(E3082),AU075427(E30384) correspond to a
region of the predicted gene.~Similar to Spinacia
oleracea proteasome 27 kD subunit (P52427) [Oryza sativa
(japonica cultivar-group)] gi|8671496|dbj|BAA96831.1|
alpha 3 subunit of 20S proteasome [Oryza sativa
(japonica cultivar-group)]
Length = 250
Score = 236 bits (603), Expect = 1e-61
Identities = 113/151 (74%), Positives = 133/151 (87%)
Frame = +3
Query: 156 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHA 335
MSRRYDSRTTIFSPEGRLYQVEYAMEAI NAG+++G+LA DGVVL+ EKK+TSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 336 VGVRREKMYRIDNHIACSVAGITADANILINTCRLAAQRYLFAYQEPMPVEQLVRTVCDT 515
EKMY+ID+H+AC+VAGI +DANIL+NT RL AQRY +YQEP+PVEQLV+++CDT
Sbjct: 61 SA---EKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDT 117
Query: 516 KQGYTQFGGQRPFGVSLLYAGWDEHYGFQLY 608
KQGYTQFGG RPFGVS L+AGWD+H+GFQLY
Sbjct: 118 KQGYTQFGGLRPFGVSFLFAGWDKHHGFQLY 148
>dbj|BAA78755.1| ESTs AU058081(E30812),AU058365(E50679), AU030138(E50679) correspond
to a region of the predicted gene.~Similar to Spinacia
oleracea mRNA for proteasome 37kD subunit.(X96974)
[Oryza sativa (japonica cultivar-group)]
Length = 250
Score = 236 bits (603), Expect = 1e-61
Identities = 113/151 (74%), Positives = 133/151 (87%)
Frame = +3
Query: 156 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHA 335
MSRRYDSRTTIFSPEGRLYQVEYAMEAI NAG+++G+LA DGVVL+ EKK+TSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 336 VGVRREKMYRIDNHIACSVAGITADANILINTCRLAAQRYLFAYQEPMPVEQLVRTVCDT 515
EKMY+ID+H+AC+VAGI +DANIL+NT RL AQRY +YQEP+PVEQLV+++CDT
Sbjct: 61 SA---EKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDT 117
Query: 516 KQGYTQFGGQRPFGVSLLYAGWDEHYGFQLY 608
KQGYTQFGG RPFGVS L+AGWD+H+GFQLY
Sbjct: 118 KQGYTQFGGLRPFGVSFLFAGWDKHHGFQLY 148
