Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001886A_C01 KCC001886A_c01
(806 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_859456.1| hypothetical protein Chr3_0240 [Leishmania majo... 41 0.020
gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio] 37 0.49
ref|NP_075993.1| NK2 transcription factor related, locus 4 [Mus ... 36 0.64
ref|NP_031522.1| AT motif binding factor 1 [Mus musculus] gi|182... 34 0.71
ref|NP_081083.1| RIKEN cDNA 1110033F04 [Mus musculus] gi|1283508... 36 0.84
>ref|NP_859456.1| hypothetical protein Chr3_0240 [Leishmania major]
gi|21629320|gb|AAM68997.1|AC125735_27 hypothetical
protein Chr3_0240 [Leishmania major]
Length = 2087
Score = 41.2 bits (95), Expect = 0.020
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 7/154 (4%)
Frame = -3
Query: 702 PCAFRSPPRHQQHMRWKPDITQHTSNCAILS------LSRTSFVYLMIPRVLPRALSVPH 541
PC P H P++ Q S A + LSR++ + LPR ++ P
Sbjct: 1671 PCTPPPTPPHGH----PPNLAQQQSRDAAVQWQHAVVLSRSATALMQTTNTLPRVVASPP 1726
Query: 540 TPHSSGQEA-CAATRCPLQLRPAWIATHQPQTAEPGLPGKCPSSTALLVIVLTPTGTTTM 364
+P + A +A+R L PA A Q A G K + A + PTG T
Sbjct: 1727 SPSRLPRVAPLSASRRTKPLAPAAAAPASSQPARSGYEAKTLARAA-----MAPTGKTQR 1781
Query: 363 ESSTLNVDGRTYRSAAVTAGLASCNDSSWTAGPA 262
S++ V G+ + A ++ LA C ++ G A
Sbjct: 1782 PSNSAKVRGKA-KQAPPSSPLAGCGSAAVARGAA 1814
>gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio]
Length = 896
Score = 36.6 bits (83), Expect = 0.49
Identities = 39/154 (25%), Positives = 54/154 (34%), Gaps = 22/154 (14%)
Frame = -3
Query: 801 SPSESQSTPPEATALLRACSSPDTRHSRTPDRPPCAFR------SPPRHQQHM------- 661
SP S+ T P + +SP RH R PP A R SPP H +
Sbjct: 679 SPKRSRGTSPGKRRTPPSSASPPPRHRRNSPNPPAAQRGRDTRSSPPAHTTRVSSSPPGR 738
Query: 660 ---------RWKPDITQHTSNCAILSLSRTSFVYLMIPRVLPRALSVPHTPHSSGQEACA 508
R + + S I +SRT PR R P + +
Sbjct: 739 YGASGSSPQRQRRQTSPSHSTRPIRRVSRTP-----EPRKSQRGSQSPPPERRQVSRSPS 793
Query: 507 ATRCPLQLRPAWIATHQPQTAEPGLPGKCPSSTA 406
A+ P Q RPA ++ + + P P K SS +
Sbjct: 794 ASPPPAQKRPASVSPSRSTSRSPPPPAKKNSSVS 827
>ref|NP_075993.1| NK2 transcription factor related, locus 4 [Mus musculus]
gi|27923816|sp|Q9EQM3|NK24_MOUSE Homeobox protein
Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2
homolog D) gi|11493714|gb|AAG35618.1|AF202038_1 homeobox
transcription factor [Mus musculus]
Length = 354
Score = 36.2 bits (82), Expect = 0.64
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = -1
Query: 308 PG*QAAMIRAGLQGPHE*RAHCAAACTASAASPVPAA*PQRCSLHGTPPASNQRTAPAMS 129
P QAA + AG+Q PH H AAA A+AA+ AA + + PP +Q AM
Sbjct: 54 PSSQAAAVAAGMQPPHAMAGHNAAAAAAAAAAAAAAA-----ATYHMPPGVSQFPHSAMG 108
Query: 128 A 126
+
Sbjct: 109 S 109
>ref|NP_031522.1| AT motif binding factor 1 [Mus musculus]
gi|18202592|sp|Q61329|ABF1_MOUSE Alpha-fetoprotein
enhancer binding protein (AT motif-binding factor)
(AT-binding transcription factor 1)
gi|1345408|dbj|BAA05046.1| AT motif-binding factor [Mus
musculus] gi|1587706|prf||2207230A transcription factor
ATBF1
Length = 3726
Score = 33.9 bits (76), Expect(2) = 0.71
Identities = 27/80 (33%), Positives = 37/80 (45%), Gaps = 8/80 (10%)
Frame = -2
Query: 580 DPQGAASGAIGPPHPTQQWPGSLC--GDPVSPTTASGVDCHTPTTDSGTWAT--GKMPVL 413
+P + G G P Q GSLC G SP+ SGV+C T G+ + G M ++
Sbjct: 605 EPNESTEGDDGGFVPHHQHAGSLCELGVGESPS-GSGVECPKCDTVLGSSRSLGGHMTMM 663
Query: 412 N----CATGHCPNSYWHHYY 365
+ C T CP WH+ Y
Sbjct: 664 HSRNSCKTLKCPKCNWHYKY 683
Score = 20.8 bits (42), Expect(2) = 0.71
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 237 CLYCFRCQPSPR 202
C+YC QP PR
Sbjct: 702 CVYCKSGQPHPR 713
>ref|NP_081083.1| RIKEN cDNA 1110033F04 [Mus musculus] gi|12835082|dbj|BAB23145.1|
unnamed protein product [Mus musculus]
Length = 167
Score = 35.8 bits (81), Expect = 0.84
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 16/68 (23%)
Frame = -3
Query: 156 QPTHC--SCDVSAI--------GCC*PATCPPCLRRQLLSC------PSWRPSGGPCRRS 25
QPT C SC +S+ CC + C PC R C P RP PC R
Sbjct: 70 QPTCCRPSCCISSCCQPSCGSSSCCGSSCCRPCCRPCCSPCCSPCCRPCCRPCCRPCCRP 129
Query: 24 CTC*RGPC 1
C C R C
Sbjct: 130 CCCLRPVC 137
