KCC001881A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001881A_C01 KCC001881A_c01
cgaccccgactccatccccctgatggtcatgcagaccatgctgggcggctgggacaagaa
ctcgaccgtgggcaagcacaGCAGCAGCGCGCTGGTGCAGACCGTGGCCACGGAGGGCCT
GGCGGACGCCTTCATGGCCTTCAACACCAATTACCACGACACCGGCCTGTTCGGCGTGTA
CGGCGTCACCGACCGCGACCGCTCCGAGGACTTCGCCTACGCCATCATGTCCAACCTGAC
GCGCATGTGCTTCGAGGTCCGCGACGCCGACGTGGCGCGCGCCAAGAACCAGCTCAAAGC
CAGCCTGATGTTCTTCCAGGACTCCACGCACCACGTGGCCGAGTCCATCGGCCGCGAGCT
GCTGGTGTACGGTCGCCGCATCCCCAAGGCGGAGATGTTCGCACGCATCGACGCCGTGGA
CGCCAACGCCATCCGCGCCGTGGCCGACCGCTTCATCTACGACCAGGACATGGCCGTGGC
CTCCGCCGGCGACGTGCAGTTCGTGCCCGACTACAAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001881A_C01 KCC001881A_c01
         (517 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK51086.1|AF363285_1 mitochondrial processing peptidase [Avi...   212  2e-54
ref|NP_186858.1| mitochondrial processing peptidase -related [Ar...   210  8e-54
gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta...   209  2e-53
pir||B48529 ubiquinol-cytochrome-c reductase (EC 1.10.2.2) beta ...   208  4e-53
emb|CAA56519.1| mitochondrial processing peptidase [Solanum tube...   208  4e-53

>gb|AAK51086.1|AF363285_1 mitochondrial processing peptidase [Avicennia marina]
          Length = 527

 Score =  212 bits (540), Expect = 2e-54
 Identities = 101/172 (58%), Positives = 130/172 (74%)
 Frame = +2

Query: 2   DPDSIPLMVMQTMLGGWDKNSTVGKHSSSALVQTVATEGLADAFMAFNTNYHDTGLFGVY 181
           DPDSI LMVMQ+MLG W+KN+  GKH  S L Q V    +A++ MAFNTNY DTGLFGVY
Sbjct: 345 DPDSIALMVMQSMLGSWNKNAVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVY 404

Query: 182 GVTDRDRSEDFAYAIMSNLTRMCFEVRDADVARAKNQLKASLMFFQDSTHHVAESIGREL 361
            +   D  +D AYAIM  +T++C+ V +ADV RA+NQLK+SL+   D T  VAE IGR+L
Sbjct: 405 AIAKPDCLDDLAYAIMYEITKLCYRVSEADVIRARNQLKSSLLLHMDGTSPVAEDIGRQL 464

Query: 362 LVYGRRIPKAEMFARIDAVDANAIRAVADRFIYDQDMAVASAGDVQFVPDYN 517
           L YGRRIP AE+FARIDAVD + I+ VA+RFI+D+D+A+++ G +Q +PDYN
Sbjct: 465 LTYGRRIPYAELFARIDAVDPSTIKRVANRFIFDRDVAISAVGPIQGLPDYN 516

>ref|NP_186858.1| mitochondrial processing peptidase -related [Arabidopsis thaliana]
           gi|6513923|gb|AAF14827.1|AC011664_9 putative
           mitochondrial processing peptidase [Arabidopsis
           thaliana] gi|22022518|gb|AAM83217.1| AT3g02090/F1C9_12
           [Arabidopsis thaliana] gi|23397047|gb|AAN31809.1|
           putative mitochondrial processing peptidase [Arabidopsis
           thaliana] gi|23463071|gb|AAN33205.1| At3g02090/F1C9_12
           [Arabidopsis thaliana] gi|25054848|gb|AAN71914.1|
           putative mitochondrial processing peptidase [Arabidopsis
           thaliana]
          Length = 531

 Score =  210 bits (535), Expect = 8e-54
 Identities = 100/172 (58%), Positives = 130/172 (75%)
 Frame = +2

Query: 2   DPDSIPLMVMQTMLGGWDKNSTVGKHSSSALVQTVATEGLADAFMAFNTNYHDTGLFGVY 181
           DPDS+ LMVMQTMLG W+KN   GKH  S L Q VA   +A++ MAFNTNY DTGLFGVY
Sbjct: 349 DPDSVALMVMQTMLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVY 408

Query: 182 GVTDRDRSEDFAYAIMSNLTRMCFEVRDADVARAKNQLKASLMFFQDSTHHVAESIGREL 361
            V   D  +D +YAIM  +T++ + V DADV RA+NQLK+SL+   D T  +AE IGR+L
Sbjct: 409 AVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQL 468

Query: 362 LVYGRRIPKAEMFARIDAVDANAIRAVADRFIYDQDMAVASAGDVQFVPDYN 517
           L YGRRIP AE+FARIDAVDA+ ++ VA+++IYD+D+A+++ G +Q +PDYN
Sbjct: 469 LTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYN 520

>gb|AAK07827.1|AF297643_1 mitochondrial processing peptidase beta subunit [Cucumis melo]
          Length = 528

 Score =  209 bits (532), Expect = 2e-53
 Identities = 104/172 (60%), Positives = 129/172 (74%)
 Frame = +2

Query: 2   DPDSIPLMVMQTMLGGWDKNSTVGKHSSSALVQTVATEGLADAFMAFNTNYHDTGLFGVY 181
           DPDSI LMVMQ MLG W+K++  GKH  S L Q VA   +A++ MAFNTNY DTGLFGVY
Sbjct: 346 DPDSIALMVMQAMLGSWNKSAGGGKHMGSELAQRVAINEVAESMMAFNTNYKDTGLFGVY 405

Query: 182 GVTDRDRSEDFAYAIMSNLTRMCFEVRDADVARAKNQLKASLMFFQDSTHHVAESIGREL 361
            V   D  +D AYAIM   T++ + V +ADV RA+NQLK+SL+   D T  VAE IGR+L
Sbjct: 406 AVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQL 465

Query: 362 LVYGRRIPKAEMFARIDAVDANAIRAVADRFIYDQDMAVASAGDVQFVPDYN 517
           L YGRRIP AE+FARIDAVDA+ I+ VA+RFIYD+D+A+A+ G +Q +PDYN
Sbjct: 466 LTYGRRIPFAELFARIDAVDASTIKRVANRFIYDRDIAIAALGPIQGLPDYN 517

>pir||B48529 ubiquinol-cytochrome-c reductase (EC 1.10.2.2) beta chain precursor
           - potato gi|410634|gb|AAB28042.1| cytochrome c
           reductase-processing peptidase subunit II, MPP subunit
           II, P53 [potatoes, var. Marfona, tuber, Peptide
           Mitochondrial, 530 aa]
          Length = 530

 Score =  208 bits (529), Expect = 4e-53
 Identities = 100/172 (58%), Positives = 128/172 (74%)
 Frame = +2

Query: 2   DPDSIPLMVMQTMLGGWDKNSTVGKHSSSALVQTVATEGLADAFMAFNTNYHDTGLFGVY 181
           DPD+IPLMVMQ+MLG W+KN+  GKH  S L Q+VA   LA++ M+FNTNY DTGLFGVY
Sbjct: 348 DPDAIPLMVMQSMLGTWNKNAGGGKHMGSDLAQSVAINELAESMMSFNTNYKDTGLFGVY 407

Query: 182 GVTDRDRSEDFAYAIMSNLTRMCFEVRDADVARAKNQLKASLMFFQDSTHHVAESIGREL 361
            V   D   D +Y IM  ++++C+ V DADV  A NQLK+SLM   D T  VAE IGR +
Sbjct: 408 AVAKSDCLSDLSYCIMREISKLCYRVSDADVTHACNQLKSSLMLHIDGTSPVAEDIGRHV 467

Query: 362 LVYGRRIPKAEMFARIDAVDANAIRAVADRFIYDQDMAVASAGDVQFVPDYN 517
           L YGRRIP  E+FAR+DAVDA+ I+ VA+RFI+DQD+A+++ G +Q +PDYN
Sbjct: 468 LTYGRRIPVTELFARVDAVDASTIKRVANRFIFDQDVAISALGPIQTLPDYN 519

>emb|CAA56519.1| mitochondrial processing peptidase [Solanum tuberosum]
          Length = 530

 Score =  208 bits (529), Expect = 4e-53
 Identities = 100/172 (58%), Positives = 128/172 (74%)
 Frame = +2

Query: 2   DPDSIPLMVMQTMLGGWDKNSTVGKHSSSALVQTVATEGLADAFMAFNTNYHDTGLFGVY 181
           DPD+IPLMVMQ+MLG W+KN+  GKH  S L Q+VA   LA++ M+FNTNY DTGLFGVY
Sbjct: 348 DPDAIPLMVMQSMLGTWNKNAGGGKHMGSDLAQSVAINELAESMMSFNTNYKDTGLFGVY 407

Query: 182 GVTDRDRSEDFAYAIMSNLTRMCFEVRDADVARAKNQLKASLMFFQDSTHHVAESIGREL 361
            V   D   D +Y IM  ++++C+ V DADV  A NQLK+SLM   D T  VAE IGR +
Sbjct: 408 AVAKSDCLSDLSYCIMREISKLCYRVSDADVTHACNQLKSSLMLHIDGTSPVAEDIGRHV 467

Query: 362 LVYGRRIPKAEMFARIDAVDANAIRAVADRFIYDQDMAVASAGDVQFVPDYN 517
           L YGRRIP  E+FAR+DAVDA+ I+ VA+RFI+DQD+A+++ G +Q +PDYN
Sbjct: 468 LTYGRRIPVTELFARVDAVDASTIKRVANRFIFDQDVAISALGPIQTLPDYN 519



EST assemble image


clone accession position
1 HC016g06_r AV633102 1 318
2 MX051a11_r BP088080 85 517




Chlamydomonas reinhardtii
Kazusa DNA Research Institute