KCC001874A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001874A_C01 KCC001874A_c01
CTTCAGTCTCGCCAGACCGCTCGCGCGGGCGCTTTCCGCTCGGGTGCTCGCCCGGTCGCC
CGCCGGACCGCTGTCAAGGTGGATGCGACCCTGAAGGTCATGATTGCGGGCGCCCCTGCT
GCCGGCAAGGGCACCCAGATGCGCCAATGATTGTCGACAAGTACAAGCTGGTACACATCT
CCGTGGGCGACATCCTGCGTGACGAGGTGAAGAACGGCACCCCCGCCGGCAAGAAGGCTA
AGGACTTCATGGACCGCGGCGTGCTGGTTCCCGATGAGGTGGTCGTGGAGATGGTGAAGC
TGCGTCTGGCGGAGGACGACGTGAAGCAGCGCGGCTGGCTGCTGGACGGCTACCCCCGTG
AGCGCCTCGCAGGCGGAGGCCATTGAGAAGGAGGGCATCCGCCCCGACGTCTTCCTGCTC
ATCAATGTTCCCGATGAGCTGCTGGTGGAGCGCGTGGTGGGCCGCCGCCTGGACCCCCAG
ACCGGCGCCATCTACCACCTTAAGTACAGCCCGCCCCCGGCTGACATCGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001874A_C01 KCC001874A_c01
         (531 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_199595.1| expressed protein [Arabidopsis thaliana] gi|294...    94  2e-36
ref|NP_198367.2| adenylate kinase -related protein [Arabidopsis ...    96  1e-35
dbj|BAB10023.1| adenylate kinase-like [Arabidopsis thaliana]           96  1e-35
emb|CAB89615.1| possible adenylate kinase [Leishmania major]           79  2e-30
pdb|1E4Y|A Chain A, Mutant P9l Of Adenylate Kinase From E. Coli,...    77  5e-26

>ref|NP_199595.1| expressed protein [Arabidopsis thaliana]
           gi|29427999|sp|Q9FIJ7|KADD_ARATH Probable adenylate
           kinase 2, chloroplast precursor (ATP-AMP
           transphosphorylase) gi|10177920|dbj|BAB11331.1| contains
           similarity to adenylate kinase~gene_id:MCA23.18
           [Arabidopsis thaliana] gi|15146328|gb|AAK83647.1|
           AT5g47840/MCA23_18 [Arabidopsis thaliana]
           gi|24111333|gb|AAN46790.1| At5g47840/MCA23_18
           [Arabidopsis thaliana]
          Length = 283

 Score = 93.6 bits (231), Expect(2) = 2e-36
 Identities = 45/84 (53%), Positives = 61/84 (72%)
 Frame = +3

Query: 108 GRPCCRQGHPDAPMIVDKYKLVHISVGDILRDEVKNGTPAGKKAKDFMDRGVLVPDEVVV 287
           G P   +G     +I  KY LVHIS GD+LR E+ +G+  G++AK+ M++G LVPDE+VV
Sbjct: 71  GAPASGKG-TQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVPDEIVV 129

Query: 288 EMVKLRLAEDDVKQRGWLLDGYPR 359
            MVK RL++ D +Q+GWLLDGYPR
Sbjct: 130 MMVKDRLSQTDSEQKGWLLDGYPR 153

 Score = 80.9 bits (198), Expect(2) = 2e-36
 Identities = 36/57 (63%), Positives = 47/57 (82%)
 Frame = +1

Query: 355 PVSASQAEAIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPAD 525
           P SASQA A++  G +PD+F+++ VP+E+L+ERVVGRRLDP TG IYHLKYSPP  +
Sbjct: 152 PRSASQATALKGFGFQPDLFIVLEVPEEILIERVVGRRLDPVTGKIYHLKYSPPETE 208

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 52  PVARRTAVKVDATLKVMIAGAPAAGKGTQ 138
           P  +  A +    LK+MI+GAPA+GKGTQ
Sbjct: 52  PKFQIVAAEKSEPLKIMISGAPASGKGTQ 80

>ref|NP_198367.2| adenylate kinase -related protein [Arabidopsis thaliana]
           gi|17979434|gb|AAL49859.1| putative adenylate kinase
           [Arabidopsis thaliana] gi|22136756|gb|AAM91697.1|
           putative adenylate kinase [Arabidopsis thaliana]
          Length = 588

 Score = 95.5 bits (236), Expect(2) = 1e-35
 Identities = 46/84 (54%), Positives = 60/84 (70%)
 Frame = +3

Query: 108 GRPCCRQGHPDAPMIVDKYKLVHISVGDILRDEVKNGTPAGKKAKDFMDRGVLVPDEVVV 287
           G P   +G     +IV K+ LVHIS GD+LR EV +GT  GK+AK+FM+ G LVPDE+V+
Sbjct: 86  GAPASGKG-TQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFMNSGSLVPDEIVI 144

Query: 288 EMVKLRLAEDDVKQRGWLLDGYPR 359
            MV  RL+ +D K+ GWLLDG+PR
Sbjct: 145 AMVAGRLSREDAKEHGWLLDGFPR 168

 Score = 75.9 bits (185), Expect(2) = 1e-35
 Identities = 31/57 (54%), Positives = 47/57 (82%)
 Frame = +1

Query: 355 PVSASQAEAIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPAD 525
           P S +QA++++K  ++PD+F+L++VPDE+L++R VGRRLDP TG IYH+K  PP +D
Sbjct: 167 PRSFAQAQSLDKLNVKPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESD 223

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +1

Query: 79  VDATLKVMIAGAPAAGKGTQ 138
           ++  LKVMI+GAPA+GKGTQ
Sbjct: 76  INEPLKVMISGAPASGKGTQ 95

>dbj|BAB10023.1| adenylate kinase-like [Arabidopsis thaliana]
          Length = 217

 Score = 95.5 bits (236), Expect(2) = 1e-35
 Identities = 46/84 (54%), Positives = 60/84 (70%)
 Frame = +3

Query: 108 GRPCCRQGHPDAPMIVDKYKLVHISVGDILRDEVKNGTPAGKKAKDFMDRGVLVPDEVVV 287
           G P   +G     +IV K+ LVHIS GD+LR EV +GT  GK+AK+FM+ G LVPDE+V+
Sbjct: 4   GAPASGKG-TQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFMNSGSLVPDEIVI 62

Query: 288 EMVKLRLAEDDVKQRGWLLDGYPR 359
            MV  RL+ +D K+ GWLLDG+PR
Sbjct: 63  AMVAGRLSREDAKEHGWLLDGFPR 86

 Score = 75.9 bits (185), Expect(2) = 1e-35
 Identities = 31/57 (54%), Positives = 47/57 (82%)
 Frame = +1

Query: 355 PVSASQAEAIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPAD 525
           P S +QA++++K  ++PD+F+L++VPDE+L++R VGRRLDP TG IYH+K  PP +D
Sbjct: 85  PRSFAQAQSLDKLNVKPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESD 141

>emb|CAB89615.1| possible adenylate kinase [Leishmania major]
          Length = 269

 Score = 79.3 bits (194), Expect(3) = 2e-30
 Identities = 35/67 (52%), Positives = 48/67 (71%)
 Frame = +3

Query: 165 KLVHISVGDILRDEVKNGTPAGKKAKDFMDRGVLVPDEVVVEMVKLRLAEDDVKQRGWLL 344
           K VH+S GD+LR EV  GT  GK A++FM RG LVPD +++ +++ RL ++D    GWLL
Sbjct: 83  KPVHVSSGDLLRAEVAQGTHLGKIAENFMQRGELVPDSLIISIIRNRLTQEDAVMNGWLL 142

Query: 345 DGYPRER 365
           DG+PR R
Sbjct: 143 DGFPRTR 149

 Score = 66.6 bits (161), Expect(3) = 2e-30
 Identities = 29/55 (52%), Positives = 41/55 (73%)
 Frame = +1

Query: 355 PVSASQAEAIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPP 519
           P + SQA A++  G+ P +F++++ PD++L  RV GRR DP TG IYHLKY+PPP
Sbjct: 146 PRTRSQAIALDAAGLCPRIFVVLDTPDDVLFGRVEGRRTDPVTGIIYHLKYNPPP 200

 Score = 28.1 bits (61), Expect(3) = 2e-30
 Identities = 11/17 (64%), Positives = 15/17 (87%)
 Frame = +1

Query: 94  KVMIAGAPAAGKGTQMR 144
           +V++AG PA+GKGTQ R
Sbjct: 54  RVVLAGPPASGKGTQAR 70

>pdb|1E4Y|A Chain A, Mutant P9l Of Adenylate Kinase From E. Coli, Modified In
           The Gly-Loop gi|10121074|pdb|1E4Y|B Chain B, Mutant P9l
           Of Adenylate Kinase From E. Coli, Modified In The
           Gly-Loop
          Length = 214

 Score = 77.0 bits (188), Expect(3) = 5e-26
 Identities = 38/73 (52%), Positives = 54/73 (73%)
 Frame = +3

Query: 141 APMIVDKYKLVHISVGDILRDEVKNGTPAGKKAKDFMDRGVLVPDEVVVEMVKLRLAEDD 320
           A  I++KY +  IS GD+LR  VK+G+  GK+AKD MD G LV DE+V+ +VK R+A++D
Sbjct: 17  AQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQED 76

Query: 321 VKQRGWLLDGYPR 359
            +  G+LLDG+PR
Sbjct: 77  CR-NGFLLDGFPR 88

 Score = 59.7 bits (143), Expect(3) = 5e-26
 Identities = 25/57 (43%), Positives = 41/57 (71%)
 Frame = +1

Query: 355 PVSASQAEAIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPAD 525
           P +  QA+A+++ GI  D  L  +VPDEL+V+R+VGRR+   +G +YH+K++PP  +
Sbjct: 87  PRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVE 143

 Score = 22.7 bits (47), Expect(3) = 5e-26
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 91  LKVMIAGAPAAGKGTQ 138
           +++++ GA  AGKGTQ
Sbjct: 1   MRIILLGALVAGKGTQ 16



EST assemble image


clone accession position
1 HC061c02_r AV636569 1 563
2 MXL074d04_r BP097354 86 490
3 MX067b06_r BP088714 99 450
4 HC087f04_r AV638537 99 540
5 MX029a03_r BP087249 104 479
6 MX042g12_r BP087749 105 284
7 HC063a07_r AV636695 105 554
8 MX010a07_r BP086489 105 408
9 HC099g02_r AV639465 105 527
10 HC083c01_r AV638202 106 500
11 HCL042e04_r AV641923 107 647
12 HC014e03_r AV632928 115 556




Chlamydomonas reinhardtii
Kazusa DNA Research Institute