KCC001865A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001865A_C01 KCC001865A_c01
gcaccacgctgcgtaaggagtacgtgGACGCCATGCAGTCGCTGTTCGACGCCACTGCGC
GCGAGGCGGTGAACGGCGCCAAGGACGTGAACGCCTGGGTGGAGGGCGTGACCAAGGGCA
TGATCAAGGACCTGGTACAAACCGACCAGTGGGACGCCATCCTGGCCAACGCCATTTACT
TCAAGGGGTTCTGGACGCACGCCTTCAAGAAGGAGGACACCTTTCCTGGCGAGTTCACCA
CGGGCGCCAAGGCCACCAAGGAGGTTCCCTTCATGTGCAAGAACTTCGAGGCGCAGGACC
GCATTACCGCCGTGCGCAAGGAGGGTCTGTACGACGCAGTGGCGCTGCCGTACAAGGGCG
ACGCCTTCAGCGCCATCGCGCTGCTGCCGGCGGTGGGCGTGGCCATGGAGGCGGCGCTCA
AGGACTGGGGCTCGGGGCCGCAGGAGCTGCGCCCGGTGGGCAAGTGCTTTGTCAAGCTGC
CCAAGTTCAAGGTAGAGAGCCAGCTCAGCCTTAAGACCGTGCTGCACAAGCTCGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001865A_C01 KCC001865A_c01
         (536 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB55818.2| hypothetical protein [Ixodes ricinus]                  86  4e-16
ref|NP_006208.1| protease inhibitor 14; pancpin [Homo sapiens] g...    85  5e-16
sp|Q9JK88|SPI2_MOUSE Serpin I2 precursor (Serine protease inhibi...    84  1e-15
dbj|BAB25079.1| unnamed protein product [Mus musculus]                 84  1e-15
gb|AAF70387.1|AF193015_1 neuroserpin [Rattus norvegicus]               84  2e-15

>emb|CAB55818.2| hypothetical protein [Ixodes ricinus]
          Length = 377

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 64/191 (33%), Positives = 96/191 (49%), Gaps = 16/191 (8%)
 Frame = +3

Query: 12  RKEYVDAMQSLFDAT------AREAVNGAKDVNAWVEGVTKGMIKDLVQTDQWDA----I 161
           + EY   +Q  +D+T      A  A     +VNAWVE VT+  I+DL+     D+    I
Sbjct: 103 KAEYTTLLQKSYDSTIKAVDFAGNADRVRLEVNAWVEEVTRSKIRDLLAPGTVDSSTSLI 162

Query: 162 LANAIYFKGFWTHAFKKEDTFPGEFTTGAKATKEVPFMCKNFEAQDRITAVRKEGLYDAV 341
           L NAIYFKG W   FK   T PG+F    + +K+V  M +  + +    +  K     A+
Sbjct: 163 LVNAIYFKGLWDSQFKPSATKPGDFHLTPQTSKKVDMMHQKGDFKMGHCSDLK---VTAL 219

Query: 342 ALPYKGDAFSAIALLPAVGVAMEAALKDWGSGPQELRPVGKCFV------KLPKFKVESQ 503
            +PYKG+  S + LLP   V   + L++  + P+    +G  +V      +LPKFK+E  
Sbjct: 220 EIPYKGNKTSMVILLPE-DVEGLSVLEEHLTAPKLSALLGGMYVTSDVNLRLPKFKLEQS 278

Query: 504 LSLKTVLHKLG 536
           + LK VL  +G
Sbjct: 279 IGLKDVLMAMG 289

>ref|NP_006208.1| protease inhibitor 14; pancpin [Homo sapiens]
           gi|20139983|sp|O75830|SPI2_HUMAN Serpin I2 precursor
           (Myoepithelium-derived serine protease inhibitor)
           (Pancpin) (Protease inhibitor 14) (TSA2004)
           gi|3724282|dbj|BAA33766.1| TSA2004 [Homo sapiens]
           gi|4972629|gb|AAD34723.1| serpin-like protein [Homo
           sapiens] gi|20379726|gb|AAH27859.1| Protease inhibitor
           14 [Homo sapiens]
          Length = 405

 Score = 85.1 bits (209), Expect = 5e-16
 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
 Frame = +3

Query: 6   TLRKEYVDAMQSLFDATAR-----EAVNGAKDVNAWVEGVTKGMIKDLVQTDQWDA---- 158
           T++++Y+   +  F +  +     +A   A+ ++ WVE  T G IKD+   +++      
Sbjct: 118 TVKEQYLHGNKEFFQSAIKLVDFQDAKACAEMISTWVERKTDGKIKDMFSGEEFGPLTRL 177

Query: 159 ILANAIYFKGFWTHAFKKEDTFPGEFTTGAKATKEVPFMCKNFEAQDRITAVRKEGLYDA 338
           +L NAIYFKG W   F+KEDT    FT    +T ++P M      +    +      Y  
Sbjct: 178 VLVNAIYFKGDWKQKFRKEDTQLINFTKKNGSTVKIPMMKALLRTKYGYFSESSLN-YQV 236

Query: 339 VALPYKGDAFSAIALLPAVGVAMEAALK--------DWGSGPQELRPVGKCFVKLPKFKV 494
           + L YKGD FS I +LPA G+ +E   K         W S  QE     +  + LP+FKV
Sbjct: 237 LELSYKGDEFSLIIILPAEGMDIEEVEKLITAQQILKWLSEMQE----EEVEISLPRFKV 292

Query: 495 ESQLSLKTVLHKL 533
           E ++  K VL+ L
Sbjct: 293 EQKVDFKDVLYSL 305

>sp|Q9JK88|SPI2_MOUSE Serpin I2 precursor (Serine protease inhibitor 14)
           gi|7649264|gb|AAF65821.1|AF251276_1 serine protease
           inhibitor 14 [Mus musculus]
          Length = 405

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 59/185 (31%), Positives = 89/185 (47%), Gaps = 12/185 (6%)
 Frame = +3

Query: 15  KEYVDAMQSLFDATAREAVNGAKDVNAWVEGVTKGMIKDLVQTDQWDA----ILANAIYF 182
           KE+  +   L D    +A   A+ ++ WVE  T G IK++   +++      +L NAIYF
Sbjct: 128 KEFFQSATKLVDFL--DAKTSAQAISTWVESKTDGKIKNMFSEEEFGPLTRLVLVNAIYF 185

Query: 183 KGFWTHAFKKEDTFPGEFTTGAKATKEVPFMCKNFEAQDRITAVRKEGLYDAVALPYKGD 362
           KG W   F+KEDT   +FT    +T +VP M     AQ    + +       + LPYK D
Sbjct: 186 KGDWKQKFRKEDTEMTDFTKKDGSTVKVPMMKALLRAQYGYFS-QSSMTCQVLELPYKAD 244

Query: 363 AFSAIALLPAVGVAMEAA--------LKDWGSGPQELRPVGKCFVKLPKFKVESQLSLKT 518
            FS + +LP    ++E          ++ W S   E     +  V LP+FK+E +L LK 
Sbjct: 245 EFSLVIILPTEDTSIEEVENQVTAPHVRRWFSELHE----EEVEVSLPRFKIEQKLDLKE 300

Query: 519 VLHKL 533
            L+ L
Sbjct: 301 ALYSL 305

>dbj|BAB25079.1| unnamed protein product [Mus musculus]
          Length = 405

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 59/185 (31%), Positives = 89/185 (47%), Gaps = 12/185 (6%)
 Frame = +3

Query: 15  KEYVDAMQSLFDATAREAVNGAKDVNAWVEGVTKGMIKDLVQTDQWDA----ILANAIYF 182
           KE+  +   L D    +A   A+ ++ WVE  T G IK++   +++      +L NAIYF
Sbjct: 128 KEFFQSATKLVDFL--DAKTSAQAISTWVESKTDGKIKNMFSEEEFGPLTRLVLVNAIYF 185

Query: 183 KGFWTHAFKKEDTFPGEFTTGAKATKEVPFMCKNFEAQDRITAVRKEGLYDAVALPYKGD 362
           KG W   F+KEDT   +FT    +T +VP M     AQ    + +       + LPYK D
Sbjct: 186 KGDWKQKFRKEDTEMTDFTKKDGSTVKVPMMKALLRAQYGYFS-QSSMTCQVLELPYKAD 244

Query: 363 AFSAIALLPAVGVAMEAA--------LKDWGSGPQELRPVGKCFVKLPKFKVESQLSLKT 518
            FS + +LP    ++E          ++ W S   E     +  V LP+FK+E +L LK 
Sbjct: 245 EFSLVIILPTEDTSIEEVENQVTAPHVRRWFSELHE----EEVEVSLPRFKIEQKLDLKE 300

Query: 519 VLHKL 533
            L+ L
Sbjct: 301 ALYSL 305

>gb|AAF70387.1|AF193015_1 neuroserpin [Rattus norvegicus]
          Length = 410

 Score = 83.6 bits (205), Expect = 2e-15
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
 Frame = +3

Query: 9   LRKEYVDAMQSLFDATAR-----EAVNGAKDVNAWVEGVTKGMIKDLVQTDQWDAI---- 161
           + +E++  M+  F+A        E V  A  +N WVE  T  ++KDLV    +DA+    
Sbjct: 120 INEEFLQMMKMYFNAEVNHVDFSENVAVANYINKWVENYTNSLLKDLVSPGDFDAVTQLA 179

Query: 162 LANAIYFKGFWTHAFKKEDTFPGEFTTGAKATKEVPFMCKNFE---AQDRITAVRKEGLY 332
           L NA+YFKG W   F+ E+T    FT   ++  ++P M +  E    +    +    G+Y
Sbjct: 180 LINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIY 239

Query: 333 DAVALPYKGDAFSAIALLPAVGV---AMEAALK-----DWGSGPQELRPVGKCFVKLPKF 488
             + +PY+GD  S + +L    V    +E  LK     +W +  ++     K  V LP+F
Sbjct: 240 QVLEIPYEGDEISMMLVLSRQEVPLATLEPLLKPQLIEEWANSVKK----QKVEVYLPRF 295

Query: 489 KVESQLSLKTVLHKLG 536
            VE ++ LK +L  LG
Sbjct: 296 TVEQEIDLKDILKALG 311



EST assemble image


clone accession position
1 HC012d04_r AV632770 1 513
2 LC070g07_r AV623942 27 536




Chlamydomonas reinhardtii
Kazusa DNA Research Institute