Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001858A_C01 KCC001858A_c01
(512 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO53242.1| ribosomal protein L4 [Chlamydomonas reinhardtii] 218 5e-56
gb|AAP79151.1| ribosomal protein rpL4 [Bigelowiella natans] 154 8e-37
pir||T09171 ribosomal protein L4 - spinach gi|2792020|emb|CAA636... 139 2e-32
sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplast precur... 139 2e-32
sp|O80361|RK4_TOBAC 50S RIBOSOMAL PROTEIN L4, CHLOROPLAST PRECUR... 137 6e-32
>gb|AAO53242.1| ribosomal protein L4 [Chlamydomonas reinhardtii]
Length = 243
Score = 218 bits (554), Expect = 5e-56
Identities = 112/130 (86%), Positives = 117/130 (89%)
Frame = +1
Query: 121 PPAFPTRPLMVAARVPSSWLLKVAEDSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGG 300
P + P + +++ LKVAEDSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGG
Sbjct: 28 PASIPYKAADGSSKGTQQLALKVAEDSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGG 87
Query: 301 KKPYAQKGTGNARRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATADM 480
KKPYAQKGTGNARRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATADM
Sbjct: 88 KKPYAQKGTGNARRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATADM 147
Query: 481 IVVESLAGKL 510
IVVESLAGKL
Sbjct: 148 IVVESLAGKL 157
Score = 90.9 bits (224), Expect = 9e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +3
Query: 39 MQTMRVAFRPAATSRSTVVTRASAVAAPASIPYKAADGSSKGTQQLA 179
MQTMRVAFRPAATSRSTVVTRASAVAAPASIPYKAADGSSKGTQQLA
Sbjct: 1 MQTMRVAFRPAATSRSTVVTRASAVAAPASIPYKAADGSSKGTQQLA 47
>gb|AAP79151.1| ribosomal protein rpL4 [Bigelowiella natans]
Length = 335
Score = 154 bits (388), Expect = 8e-37
Identities = 75/110 (68%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 181 LKVAE-DSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVS 357
LKVA ++AKGLVHRYL+ + + R GTAST T+SEVRGGGKKPY QK TGNAR+GS +
Sbjct: 131 LKVARPETAKGLVHRYLMYARNSMRAGTASTKTKSEVRGGGKKPYQQKKTGNARQGSRRT 190
Query: 358 PLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATADMIVVESLAGK 507
PL PGGG+ FGPKP+DWS+ MN+KERR+A+ATALQSA++D+I+VE L GK
Sbjct: 191 PLKPGGGIIFGPKPRDWSVDMNQKERRIAMATALQSASSDVILVEDLDGK 240
>pir||T09171 ribosomal protein L4 - spinach gi|2792020|emb|CAA63651.1| ribosomal
protein L4 [Spinacia oleracea]
Length = 293
Score = 139 bits (350), Expect = 2e-32
Identities = 68/102 (66%), Positives = 80/102 (77%)
Frame = +1
Query: 196 DSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFPGG 375
+ A+ +VHR L+ QN R+GTASTLTR+EVRGGG+KPY QK TG ARRGS SPL PGG
Sbjct: 78 EKARAVVHRGLITHLQNKRRGTASTLTRAEVRGGGRKPYPQKKTGRARRGSQGSPLRPGG 137
Query: 376 GVTFGPKPKDWSISMNKKERRLALATALQSATADMIVVESLA 501
GV FGPKP+DW+I MNKKERRLAL+TA+ SA + VVE A
Sbjct: 138 GVIFGPKPRDWTIKMNKKERRLALSTAIASAVGNSFVVEEFA 179
>sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplast precursor (R-protein L4)
gi|7440644|pir||T09170 ribosomal protein L4, chloroplast
- spinach gi|2792007|emb|CAA75149.1| chloroplast
ribosomal protein L4 [Spinacia oleracea]
Length = 293
Score = 139 bits (350), Expect = 2e-32
Identities = 68/102 (66%), Positives = 80/102 (77%)
Frame = +1
Query: 196 DSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFPGG 375
+ A+ +VHR L+ QN R+GTASTLTR+EVRGGG+KPY QK TG ARRGS SPL PGG
Sbjct: 78 EKARAVVHRGLITHLQNKRRGTASTLTRAEVRGGGRKPYPQKKTGRARRGSQGSPLRPGG 137
Query: 376 GVTFGPKPKDWSISMNKKERRLALATALQSATADMIVVESLA 501
GV FGPKP+DW+I MNKKERRLAL+TA+ SA + VVE A
Sbjct: 138 GVIFGPKPRDWTIKMNKKERRLALSTAIASAVGNSFVVEEFA 179
>sp|O80361|RK4_TOBAC 50S RIBOSOMAL PROTEIN L4, CHLOROPLAST PRECURSOR (R-PROTEIN L4)
gi|7440645|pir||T01739 ribosomal protein L4, chloroplast
- common tobacco gi|3298439|dbj|BAA31510.1| chloroplast
ribosomal protein L4 [Nicotiana tabacum]
Length = 282
Score = 137 bits (346), Expect = 6e-32
Identities = 68/104 (65%), Positives = 82/104 (78%)
Frame = +1
Query: 196 DSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFPGG 375
D+A+ +VHR L +N R+GTASTLTRSEVRGGG KPY QK TG ARRGS+ +PL PGG
Sbjct: 71 DTARAVVHRGLTTDLRNQRRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSNRTPLRPGG 130
Query: 376 GVTFGPKPKDWSISMNKKERRLALATALQSATADMIVVESLAGK 507
GV FGPKPKDWS+ +NKKE+RLA++TAL SA+ + IVVE K
Sbjct: 131 GVVFGPKPKDWSVKINKKEKRLAISTALSSASENTIVVEEFNDK 174
