KCC001855A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001855A_C01 KCC001855A_c01
cttgaCAGCATCAACCATGAAGCAGGCCCAGAAGCTTGTGACGCCCGTGCTGGAGGCATT
CGCCCAGAATGCCAAGCGTGGCTTCGCCTCGCAGCGTTTCGCGGCCCGCGCTTCTGAGGA
GGTTGTTGCCGTGGACAATGCTGCGCGCAAGGGATGTGACGGCGTGCTGGAGGTGCCCAG
CCGCCTGCTGATGGGCCCAGGCCCCGCCAACGCCTACCCGCGCATCCTGACCGCCCAGGC
GCTGCCGCTGCTGGGCCACATGCACCCGCCGTTCCTCAAGATCATGGACGAGCTGTCAGA
GGGCCTGCGCTACACCTTCCAGACCAAGTCCAAGTACACGCTGATGGTGAGCGGCACCGG
GCACGCCGGCATGGAGGCCGCCATCGCCAACCTGGTGGAGCCGGGCGACAAGGTGCTGGT
GGGCAACGCCGGCATCTGGGGAGAGCGCGTGGGCATCCTGTCGCGCCGCTACAACGCTGA
CGTGATTGAGCTGAAGACGCCCGCCGGCGACCACCTTCTCGTACGAGACGCTGAAGGCGG
CGCTGACGCAGCACAAGCCCAAGGTGCTGTTCCTGTGCCAGGGCGAGAGCAGCACCGGCA
CCCACCAGTCGCTCGCGGGTCTAGGCGAGGTGTGCCGCCAGACCGGCACCCTGGCTGCTG
GTGGACACGGTGTGCTCGCTGGGTGGCGTGCCCCTGTTCGCGGATCAGTGGGGCGTGGAC
TGCATCTACAGCGGCAGCCAGAAGTGCCTCAGCGGCCCGCCGGGTGCCTCGCCCTTCTTC
ATGTCGGAGCGCGCAATGGAGGCGCTGCAGAAGCGCAAGAGCCCGCCCGCCACCTACAAC
CTGTACATGAACCTCATCGGCGACTACTGGGGCTGGTTCGGCAAGCGCTCCTACCACCAC
ACCGGCCCCGTGAGCACCTTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001855A_C01 KCC001855A_c01
         (921 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_485047.1| alanine--glyoxylate aminotransferase [Nostoc sp...   125  1e-63
ref|ZP_00109301.1| COG0075: Serine-pyruvate aminotransferase/arc...   123  1e-61
ref|XP_309676.1| ENSANGP00000019757 [Anopheles gambiae] gi|21293...   132  1e-58
ref|NP_511062.1| Serine pyruvate aminotransferase CG3926-PA [Dro...   133  2e-57
emb|CAC17015.1| putative alanine:glyoxylate aminotransferase [Xe...   135  6e-53

>ref|NP_485047.1| alanine--glyoxylate aminotransferase [Nostoc sp. PCC 7120]
           gi|25287373|pir||AI1931 alanine-glyoxylate
           aminotransferase [imported] - Nostoc sp.  (strain PCC
           7120) gi|17130350|dbj|BAB72961.1| alanine--glyoxylate
           aminotransferase [Nostoc sp. PCC 7120]
          Length = 381

 Score =  125 bits (315), Expect(3) = 1e-63
 Identities = 62/115 (53%), Positives = 82/115 (70%)
 Frame = +2

Query: 167 LEVPSRLLMGPGPANAYPRILTAQALPLLGHMHPPFLKIMDELSEGLRYTFQTKSKYTLM 346
           LEVPSRLL+GPGP+NA+P +L A  +  +GH+ P FL +MDE+   LRY +QT++  T+ 
Sbjct: 18  LEVPSRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIA 77

Query: 347 VSGTGHAGMEAAIANLVEPGDKVLVGNAGIWGERVGILSRRYNADVIELKTPAGD 511
           VSGTG A MEA IAN VEPGD VL+G AG +G R+  ++ RY ADV  +  P G+
Sbjct: 78  VSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGE 132

 Score =  107 bits (267), Expect(3) = 1e-63
 Identities = 53/89 (59%), Positives = 64/89 (71%)
 Frame = +1

Query: 655 LLVDTVCSLGGVPLFADQWGVDCIYSGSQKCLSGPPGASPFFMSERAMEALQKRKSPPAT 834
           LLVDTV SLGGVP+F D WGVD  YS SQK L   PGASPF MS RA+E LQ+R++  A 
Sbjct: 180 LLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVAN 239

Query: 835 YNLYMNLIGDYWGWFGKRSYHHTGPVSTF 921
           + L MNL+G YWG   +R YHHT P++ +
Sbjct: 240 WYLDMNLLGKYWG--SERVYHHTAPINLY 266

 Score = 54.3 bits (129), Expect(3) = 1e-63
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = +3

Query: 498 RPPATTFSYETLKAALTQHKPKVLFLCQGESSTGTHQSLAGLGEVCRQTGTL 653
           +P    FS E L+ AL  H+P +L L   E+STG  Q L G+GE+CR+ GTL
Sbjct: 128 KPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTL 179

>ref|ZP_00109301.1| COG0075: Serine-pyruvate aminotransferase/archaeal aspartate
           aminotransferase [Nostoc punctiforme]
          Length = 382

 Score =  123 bits (309), Expect(3) = 1e-61
 Identities = 61/114 (53%), Positives = 80/114 (69%)
 Frame = +2

Query: 167 LEVPSRLLMGPGPANAYPRILTAQALPLLGHMHPPFLKIMDELSEGLRYTFQTKSKYTLM 346
           LE+PSRLL+GPGP+NA+P +L A     +GH+ P FL +MDE+   LRY +QT++  T+ 
Sbjct: 18  LEIPSRLLLGPGPSNAHPTVLQAMNTSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIA 77

Query: 347 VSGTGHAGMEAAIANLVEPGDKVLVGNAGIWGERVGILSRRYNADVIELKTPAG 508
           VSGTG A MEA IAN VEPGD VL+G AG +G R+  ++ RY ADV  +  P G
Sbjct: 78  VSGTGTAAMEATIANAVEPGDIVLIGVAGYFGNRLVDMAGRYGADVRSITKPWG 131

 Score =  108 bits (269), Expect(3) = 1e-61
 Identities = 55/89 (61%), Positives = 65/89 (72%)
 Frame = +1

Query: 655 LLVDTVCSLGGVPLFADQWGVDCIYSGSQKCLSGPPGASPFFMSERAMEALQKRKSPPAT 834
           LLVDTV SLGGVPLF D WGVD  YS SQK LS PPGASP  MS RA+E LQ+R+S  A 
Sbjct: 180 LLVDTVTSLGGVPLFLDAWGVDLAYSCSQKGLSCPPGASPLTMSARAVEKLQQRQSKVAN 239

Query: 835 YNLYMNLIGDYWGWFGKRSYHHTGPVSTF 921
           + L M L+G YWG   +R+YHHT P++ +
Sbjct: 240 WYLDMLLLGKYWG--AERTYHHTAPINLY 266

 Score = 49.7 bits (117), Expect(3) = 1e-61
 Identities = 22/52 (42%), Positives = 32/52 (61%)
 Frame = +3

Query: 498 RPPATTFSYETLKAALTQHKPKVLFLCQGESSTGTHQSLAGLGEVCRQTGTL 653
           +P    F+ + LK AL  H+P +L L   E+STG  Q L G+ ++CR+ GTL
Sbjct: 128 KPWGQVFNLDELKTALETHRPAILALVHAETSTGARQPLEGVADLCREFGTL 179

>ref|XP_309676.1| ENSANGP00000019757 [Anopheles gambiae] gi|21293265|gb|EAA05410.1|
           ENSANGP00000019757 [Anopheles gambiae str. PEST]
          Length = 415

 Score =  132 bits (331), Expect(3) = 1e-58
 Identities = 61/117 (52%), Positives = 81/117 (69%)
 Frame = +2

Query: 167 LEVPSRLLMGPGPANAYPRILTAQALPLLGHMHPPFLKIMDELSEGLRYTFQTKSKYTLM 346
           L VP +LLMGPGP+NA PR+L A A P+LGH+HP  LKIMD++  G+RY FQT +  T  
Sbjct: 34  LVVPEKLLMGPGPSNAPPRVLEAMARPILGHLHPETLKIMDDIKAGVRYLFQTNNAATFC 93

Query: 347 VSGTGHAGMEAAIANLVEPGDKVLVGNAGIWGERVGILSRRYNADVIELKTPAGDHL 517
           +S +GH GMEA + NL+E GD VL+G+ G WG+R   ++ RY ADV  ++   G  L
Sbjct: 94  LSASGHGGMEATLCNLLEDGDVVLIGHTGHWGDRAADMASRYGADVRLVRASQGSSL 150

 Score = 90.9 bits (224), Expect(3) = 1e-58
 Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +1

Query: 655 LLVDTVCSLGGVPLFADQWGVDCIYSGSQKCLSGPPGASPFFMSERAMEALQKRKSPPAT 834
           L+VDTV SLGG P   D W VD  Y+GSQK L  PPG +P   + RA+E  ++R++    
Sbjct: 196 LVVDTVASLGGTPFHMDAWEVDAAYTGSQKVLGAPPGITPISFNHRAVERYRRRQTKVKV 255

Query: 835 YNLYMNLIGDYWGWFGK-RSYHHT 903
           Y   M L+GDYWG FG+ R YHHT
Sbjct: 256 YYWDMFLVGDYWGCFGRPRIYHHT 279

 Score = 48.1 bits (113), Expect(3) = 1e-58
 Identities = 21/48 (43%), Positives = 30/48 (61%)
 Frame = +3

Query: 495 RRPPATTFSYETLKAALTQHKPKVLFLCQGESSTGTHQSLAGLGEVCR 638
           R    ++ +   ++ A+  H+P VLFL QGESSTG  Q L G+G +CR
Sbjct: 143 RASQGSSLALPEIRRAIETHRPSVLFLTQGESSTGVRQGLEGVGALCR 190

>ref|NP_511062.1| Serine pyruvate aminotransferase CG3926-PA [Drosophila
           melanogaster] gi|7290721|gb|AAF46168.1| CG3926-PA
           [Drosophila melanogaster]
          Length = 394

 Score =  133 bits (334), Expect(3) = 2e-57
 Identities = 60/106 (56%), Positives = 80/106 (74%)
 Frame = +2

Query: 167 LEVPSRLLMGPGPANAYPRILTAQALPLLGHMHPPFLKIMDELSEGLRYTFQTKSKYTLM 346
           L VPS+ LMGPGP+N   R+L A + P+LGHMHP  L+IMDE+ EG++Y FQT +  T+ 
Sbjct: 13  LYVPSKTLMGPGPSNCSHRVLEAMSNPVLGHMHPECLQIMDEVKEGIKYIFQTLNDATMC 72

Query: 347 VSGTGHAGMEAAIANLVEPGDKVLVGNAGIWGERVGILSRRYNADV 484
           +SG GH+GMEAA+ NL+E GD VL+G  G+WG R G ++RRY A+V
Sbjct: 73  ISGAGHSGMEAALCNLIEDGDVVLMGITGVWGHRAGDMARRYGAEV 118

 Score = 90.9 bits (224), Expect(3) = 2e-57
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 652 WLLVDTVCSLGGVPLFADQWGVDCIYSGSQKCLSGPPGASPFFMSERAMEALQKRKSPPA 831
           +L+VDTV SLGG     D+W VD  Y+GSQK L GP G +P   S+RA+  ++KRK+ P 
Sbjct: 175 FLIVDTVASLGGTEFLMDEWKVDVAYTGSQKSLGGPAGLTPISFSKRALTRIRKRKTKPK 234

Query: 832 TYNLYMNLIGDYWGWFG-KRSYHHT 903
            Y   + LIG YWG +G  R YHHT
Sbjct: 235 VYYFDILLIGQYWGCYGTPRIYHHT 259

 Score = 43.1 bits (100), Expect(3) = 2e-57
 Identities = 20/42 (47%), Positives = 29/42 (68%), Gaps = 1/42 (2%)
 Frame = +3

Query: 519 SYETLKAALTQHKPKVLFLCQGESSTG-THQSLAGLGEVCRQ 641
           S+E +  A   H+PKV F+ QG+SSTG   Q++  LGE+CR+
Sbjct: 130 SHEEITFAFEAHRPKVFFIAQGDSSTGIIQQNIRELGELCRK 171

>emb|CAC17015.1| putative alanine:glyoxylate aminotransferase [Xenopus laevis]
          Length = 415

 Score =  135 bits (339), Expect(2) = 6e-53
 Identities = 63/123 (51%), Positives = 82/123 (66%)
 Frame = +2

Query: 167 LEVPSRLLMGPGPANAYPRILTAQALPLLGHMHPPFLKIMDELSEGLRYTFQTKSKYTLM 346
           L VP RL++GPGP+N  PRI  A  L L+GHMHP   +IMD++ +G++Y FQTK+  T  
Sbjct: 41  LNVPQRLMLGPGPSNVPPRIQAAGGLQLIGHMHPEMFQIMDDIKQGIQYAFQTKNNLTFA 100

Query: 347 VSGTGHAGMEAAIANLVEPGDKVLVGNAGIWGERVGILSRRYNADVIELKTPAGDHLLVR 526
           VSG+GH  ME AI N+VE GD VLV   GIWGER G ++ R  ADV  +  P G+   ++
Sbjct: 101 VSGSGHCAMETAIFNVVEKGDVVLVAVKGIWGERAGDIAERIGADVRYVSKPVGEAFTLK 160

Query: 527 DAE 535
           D E
Sbjct: 161 DVE 163

 Score = 95.9 bits (237), Expect(2) = 6e-53
 Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +1

Query: 655 LLVDTVCSLGGVPLFADQWGVDCIYSGSQKCLSGPPGASPFFMSERAMEALQKRKSPPAT 834
           LLVD+V SLGG P++ D+ G+D +YSGSQK L+ PPG +P   SE A + +  RK+ P +
Sbjct: 203 LLVDSVASLGGAPIYMDKQGIDILYSGSQKVLNAPPGTAPISFSEAASKKMFGRKTKPPS 262

Query: 835 YNLYMNLIGDYWGWFGK-RSYHHTGPVSTF 921
             + +N + +YWG  GK R YHHTGPV+ F
Sbjct: 263 LYVDINWLANYWGCDGKPRIYHHTGPVTNF 292

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 20/52 (38%), Positives = 32/52 (61%)
 Frame = +3

Query: 498 RPPATTFSYETLKAALTQHKPKVLFLCQGESSTGTHQSLAGLGEVCRQTGTL 653
           +P    F+ + ++ AL +HKP + F+  GESS+G  Q L GLG++C +   L
Sbjct: 151 KPVGEAFTLKDVEKALAEHKPSLFFITHGESSSGVVQPLDGLGDLCHRYNCL 202



EST assemble image


clone accession position
1 MX058f01_r BP088358 1 342
2 HC033b10_r AV634424 6 524
3 MX260f12_r BP092908 7 453
4 MXL099g05_r BP098825 9 459
5 LC058g03_r AV623086 9 532
6 HCL081a01_r AV644057 22 494
7 LC057g08_r AV623012 361 881
8 HC011c01_r AV632677 404 794
9 HC100b06_r AV639499 496 922




Chlamydomonas reinhardtii
Kazusa DNA Research Institute