KCC001853A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001853A_C01 KCC001853A_c01
atacgCTCATAAGCTCACACAAATAGAAATGGTCCTACTCCTAGTCACGCACACGATTGA
AGTGCCCTCCTCGCGAGTGCCGCTATCCGCTATCATCCTGGTCGATGCCATCAAGCGCAA
ACAGCTGCCTCCGAATCTAAAATGCCGGCTGGTAATCCCGAGCTCGGGGCACCACTCTTG
CTCAATATGGGACGCTAGCTCGGTGGAGGAGCTCCAAGCTTGGATTGACATAAACCTCCT
GGATGGCACAGCTAGCATCGCGGAGATTCCCGAGGAGTTCACGTATGGCCTTTCGCTGGA
GCTGACTACGGCGCGTGCTGCTGACAAGGTCGCCACCACCAGCAAATCCACGCTGGAGCG
AATCAACACCACCGGCGCGCGCGTTATGGAGAGCATGTCGGAGAAGCTGGACGCGCGCAC
CAACCTGATCACGGCCACCCGTGAGACCGCCTCCGCCGCCGCCGCTAAGGTGAAGCAGGC
CACCAACAGCGCCATGGAGAACGAGAGCGTGCAGCGGGGGCTGCAGAGCCTCAGCACCTC
GCTGCAGAGCGCAGGCACCAGCATGAACCGCGCCTTCACCTGGGTGGGCAGCAAGGTGAA
GGAGTCCTTTGGCGCCGAGGCGGGCGCGGGCTACACGGGCGGTGGCGGCGTGGGCGGCGC
GCAGTCCTACAGCGGCTTCAGCTCCGAGCCGCCCAGCTATGAGGCCGCGGCTTACGCCTC
CGCGCCCGCCGCGGCTGCGGGTCTGGGCG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001853A_C01 KCC001853A_c01
(749 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_310724.1| ENSANGP00000010257 [Anopheles gambiae] gi|21294... 58 1e-07
dbj|BAC87637.1| unnamed protein product [Homo sapiens] 54 3e-06
ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|2838049... 53 4e-06
ref|NP_507521.1| putative protein (5S487) [Caenorhabditis elegan... 52 8e-06
ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300... 52 8e-06
>ref|XP_310724.1| ENSANGP00000010257 [Anopheles gambiae] gi|21294553|gb|EAA06698.1|
ENSANGP00000010257 [Anopheles gambiae str. PEST]
Length = 139
Score = 58.2 bits (139), Expect = 1e-07
Identities = 54/141 (38%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Frame = +3
Query: 324 TRSPPPANPRWS--ESTPPARALWRACRRSWTRAPT*SRPPVRPPPPPPLR*SRPPTAP- 494
+R P PANPR ++ P R+ R R + T+ P RPP R PPPPP PPT P
Sbjct: 6 SRRPSPANPRSGGPAASCPRRSASR--RATSTKRPRSGRPPARSPPPPP-----PPTTPP 58
Query: 495 -WRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARATRAVAAWAARSPT 671
R RA G RA+ PR +A TAP+ G + R P R + T A S T
Sbjct: 59 SGRRRAGRAG-RAAPPRSTPRAA--TAPTAGSS---RPPCPRPRTKMTS-----ARSSAT 107
Query: 672 AASAPSRPAMRP----RLTPP 722
A + P P RP L PP
Sbjct: 108 ARTLPPAPTCRPPGPSTLLPP 128
>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
Length = 286
Score = 53.5 bits (127), Expect = 3e-06
Identities = 54/157 (34%), Positives = 66/157 (41%), Gaps = 20/157 (12%)
Frame = +3
Query: 324 TRSPPPANPRWSESTPPARALWRAC-RRSWTRAPT*SRPPVRPPPPPPLR*SRPPTAPWR 500
TR+PP A+PR TPP + R R S TR PT PP R PP P + P +P R
Sbjct: 46 TRTPPRASPR---RTPPRASPRRTPPRASLTRPPT-RAPPTRMPPTAPPTRTPPTASPAR 101
Query: 501 TRACSGGCRASAPRCRAQAPA*TAP-----------SPGWAAR*RSPLAPRRARATRAVA 647
T R A+ P +P +P A+ R+P PR +
Sbjct: 102 TPPTESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTP--PRASPRRTPPR 159
Query: 648 AWAARSPTAASAPSR--PAMRPRLTPPR------PPR 734
A R+P AS P R P PR TPPR PPR
Sbjct: 160 ASPTRTPPRAS-PKRTPPRASPRRTPPRASPTRAPPR 195
Score = 43.9 bits (102), Expect = 0.003
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Frame = +3
Query: 324 TRSPPPANPRWSESTP-PARALWRAC-RRSWTRAPT*SRPPVRPPPPPPLR*SRPPTAPW 497
TR+PP A+PR + ST P R RA RR+ RA P R PP + + P +P
Sbjct: 127 TRTPPRASPRRTPSTASPTRTPPRASPRRTPPRAS-----PTRTPPRASPKRTPPRASPR 181
Query: 498 RTRACSGGCRASAPRCRAQAPA*TAP--SPGWAAR*RSP------LAPRRARATRAVAAW 653
RT + RA + P +P +P A+ R+P P RA TR
Sbjct: 182 RTPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTPPTESPARTPPRASPTRTPPTE 241
Query: 654 A-ARSPTAASAPSRPAMRPRLTPPR-PPR 734
+ AR+P+ AS P PR +P R PPR
Sbjct: 242 SPARTPSRASTRRTP---PRASPTRTPPR 267
Score = 40.8 bits (94), Expect = 0.023
Identities = 38/139 (27%), Positives = 56/139 (39%), Gaps = 6/139 (4%)
Frame = +3
Query: 324 TRSPPPANPRWSES------TPPARALWRACRRSWTRAPT*SRPPVRPPPPPPLR*SRPP 485
TR+PP A+PR + TPP + R R+ R P R PP + + P
Sbjct: 145 TRTPPRASPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAPPRASPKRTPPT 204
Query: 486 TAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARATRAVAAWAARS 665
+P RT + R A+ P +P+ R+P AR T + A+
Sbjct: 205 ASPTRTPPRASPTRTPPTESPARTPPRASPT-------RTPPTESPAR-TPSRASTRRTP 256
Query: 666 PTAASAPSRPAMRPRLTPP 722
P A+ + P P+ TPP
Sbjct: 257 PRASPTRTPPRASPKRTPP 275
>ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|28380492|gb|AAF49349.4|
CG13731-PA [Drosophila melanogaster]
Length = 926
Score = 53.1 bits (126), Expect = 4e-06
Identities = 46/142 (32%), Positives = 54/142 (37%)
Frame = +3
Query: 315 VLLTRSPPPANPRWSESTPPARALWRACRRSWTRAPT*SRPPVRPPPPPPLR*SRPPTAP 494
V TR PPP P + PP L R+ P +RPP RPP PPP R PPT
Sbjct: 525 VRTTRPPPP--PTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPPPPPT-- 580
Query: 495 WRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARATRAVAAWAARSPTA 674
RAS P AP P+ PL P R T +P
Sbjct: 581 ----------RASTP-----APTYLPPT-------NKPLPPVTVRTT------VRTTPRP 612
Query: 675 ASAPSRPAMRPRLTPPRPPRLR 740
P++P RP T PP +R
Sbjct: 613 TLPPTKPPTRPPTTYLPPPSVR 634
Score = 46.2 bits (108), Expect = 5e-04
Identities = 49/164 (29%), Positives = 60/164 (35%), Gaps = 28/164 (17%)
Frame = +3
Query: 333 PPPANPRWSESTPPARALWRACRRSWTRAPT*SRPPVR----------PPPPPPLR*--- 473
PPP +PR + PP R R TR P PP PPPPPP R
Sbjct: 272 PPPPSPR---TPPPTRP---PTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPP 325
Query: 474 SRPPTAPWRTRACSGGC-------------RASAPRCRAQAPA*TA--PSPGWAAR*RSP 608
+RPPT P TR + R + P R P A P+P + P
Sbjct: 326 TRPPTKPPTTRPPATYLPPTNKPPPPVTTRRPTPPPTRPPPPPTRASTPAPTYLPPTNKP 385
Query: 609 LAPRRARATRAVAAWAARSPTAASAPSRPAMRPRLTPPRPPRLR 740
L P R T +P P++P RP T PP +R
Sbjct: 386 LPPVTVRTT------VRTTPRPTPPPTKPPTRPPTTYLPPPTVR 423
Score = 45.1 bits (105), Expect = 0.001
Identities = 41/152 (26%), Positives = 53/152 (33%), Gaps = 15/152 (9%)
Frame = +3
Query: 330 SPPPANPRWSESTPPARALWRACRRSWTRAPT*SRPPVRPP---------------PPPP 464
+PPP P + PP L R+ P +RPP +PP PPP
Sbjct: 402 TPPPTKP---PTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPT 458
Query: 465 LR*SRPPTAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARATRAV 644
+RPPT P TR T P+P + PL P R T
Sbjct: 459 RPPTRPPTYPPTTRRL------------------TTPAPTYLPPTNKPLPPVTVRTT--- 497
Query: 645 AAWAARSPTAASAPSRPAMRPRLTPPRPPRLR 740
+P P++P RP T PP +R
Sbjct: 498 ---VRTTPRPTLPPTKPPTRPPTTYLPPPTVR 526
Score = 43.1 bits (100), Expect = 0.005
Identities = 41/160 (25%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Frame = +3
Query: 306 LRRVLLTRSPPPANPRWSESTPPARALWRACRRSWTRAPT*SRPPVRPP----------- 452
+R + T P P + PP L R+ P +RPP +PP
Sbjct: 705 VRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRT 764
Query: 453 ----PPPPLR*SRPPTAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPR 620
PPP +RPPT P TR T P+P + PL P
Sbjct: 765 TRATPPPTRPPTRPPTYPPTTRRL------------------TTPAPTYLPPTNKPLPPV 806
Query: 621 RARATRAVAAWAARSPTAASAPSRPAMRPRLTPPRPPRLR 740
R T +P P+RP +P T PP +R
Sbjct: 807 TVRTT------VRTTPRPTLPPTRPPTKPPTTYLPPPTVR 840
Score = 43.1 bits (100), Expect = 0.005
Identities = 41/160 (25%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Frame = +3
Query: 306 LRRVLLTRSPPPANPRWSESTPPARALWRACRRSWTRAPT*SRPPVRPP----------- 452
+R + T P P + PP L R+ P +RPP +PP
Sbjct: 602 VRTTVRTTPRPTLPPTKPPTRPPTTYLPPPSVRTTRPPPPPTRPPTKPPTTYLPPVTVRT 661
Query: 453 ----PPPPLR*SRPPTAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPR 620
PPP +RPPT P TR T P+P + PL P
Sbjct: 662 TRATPPPTRPPTRPPTYPPTTRRL------------------TTPAPTYLPPTNKPLPPV 703
Query: 621 RARATRAVAAWAARSPTAASAPSRPAMRPRLTPPRPPRLR 740
R T +P P++P RP T PP +R
Sbjct: 704 TVRTT------VRTTPRPTLPPTKPPTRPPTTYLPPPTVR 737
Score = 42.0 bits (97), Expect = 0.010
Identities = 46/148 (31%), Positives = 53/148 (35%), Gaps = 12/148 (8%)
Frame = +3
Query: 324 TRSPPPANPRWSESTPPARALWRACRRSWTRAPT*SRP--PVR---PPPPPPLR*---SR 479
T PP P + PP R R T P ++P PV PPPPPP R +R
Sbjct: 182 TTQPPTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTR 241
Query: 480 PPTAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARATRAVAAWAA 659
PPT P TR + P P T P P +PR TR
Sbjct: 242 PPTRPPTTRPPA----TYLPPTNKPLPPVTTRLP------PPPPSPRTPPPTRPPTRPPT 291
Query: 660 RSPTAASAPSR----PAMRPRLTPPRPP 731
P A P P + RL PP PP
Sbjct: 292 TRPPATYLPPTNKPLPPVTTRLPPPPPP 319
Score = 40.8 bits (94), Expect = 0.023
Identities = 46/157 (29%), Positives = 54/157 (34%), Gaps = 18/157 (11%)
Frame = +3
Query: 315 VLLTRSPPPANPRWSESTPPARALWRACRRSWTRAPT*SRPPVRPP--PPPPLR*SRP-- 482
V TR PPP P + PP L R+ P +RPP RPP PP R + P
Sbjct: 422 VRTTRPPPP--PTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPAP 479
Query: 483 ----------PTAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARA 632
P RT + P P T P R P P R
Sbjct: 480 TYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPT 539
Query: 633 ---TRAVAAWAARSPTAASAPSRPAMRPRLTPP-RPP 731
T + R+ A P+RP RP PP RPP
Sbjct: 540 KPPTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPP 576
Score = 34.3 bits (77), Expect = 2.1
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 321 LTRSPPPANPRWSESTPPA--RALWRACRRSWTRAPT*SRPPVRPP----PPPPLR*SRP 482
LT P P ++ PP R R R T PT RPP +PP PPP +R +RP
Sbjct: 788 LTTPAPTYLPPTNKPLPPVTVRTTVRTTPRP-TLPPT--RPPTKPPTTYLPPPTVRTTRP 844
Query: 483 PTAPWR 500
P P R
Sbjct: 845 PPPPTR 850
>ref|NP_507521.1| putative protein (5S487) [Caenorhabditis elegans]
gi|11065667|emb|CAC14415.1| Hypothetical protein
Y59A8B.19 [Caenorhabditis elegans]
Length = 390
Score = 52.4 bits (124), Expect = 8e-06
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 4/138 (2%)
Frame = +3
Query: 330 SPPPANPRWSESTP-PARALWRACRRSWTRAPT*SRPPVRPPPPPPL---R*SRPPTAPW 497
+PP A PR + P P A RA R T R PV PP PP R RPP AP
Sbjct: 207 APPAAPPRMPDRPPRPPVAPPRALVRPPTVPVNPPRAPVAPPVAPPRMPDRPPRPPVAPS 266
Query: 498 RTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*RSPLAPRRARATRAVAAWAARSPTAA 677
R + PR P P R P+AP RA R PT
Sbjct: 267 RALVRPPTVPVNPPRAPVAPPVAPPRMPDRPPR--PPVAPPRA---------LVRPPTVP 315
Query: 678 SAPSRPAMRPRLTPPRPP 731
P R + P + PPRPP
Sbjct: 316 VNPPRAPVAPPVAPPRPP 333
Score = 44.7 bits (104), Expect = 0.002
Identities = 36/103 (34%), Positives = 40/103 (37%), Gaps = 3/103 (2%)
Frame = +3
Query: 432 RPPVRPPPPPPL---R*SRPPTAPWRTRACSGGCRASAPRCRAQAPA*TAPSPGWAAR*R 602
RPPV PP PP R RPP AP R + PR P AP R
Sbjct: 203 RPPVAPPAAPPRMPDRPPRPPVAPPRALVRPPTVPVNPPRAPVAPP--VAPPRMPDRPPR 260
Query: 603 SPLAPRRARATRAVAAWAARSPTAASAPSRPAMRPRLTPPRPP 731
P+AP RA R PT P R + P + PPR P
Sbjct: 261 PPVAPSRA---------LVRPPTVPVNPPRAPVAPPVAPPRMP 294
Score = 32.3 bits (72), Expect = 8.2
Identities = 28/79 (35%), Positives = 31/79 (38%), Gaps = 1/79 (1%)
Frame = +3
Query: 330 SPPPANPRWSESTP-PARALWRACRRSWTRAPT*SRPPVRPPPPPPLR*SRPPTAPWRTR 506
+PP A PR + P P A RA R T R PV PP PP R PT P
Sbjct: 285 APPVAPPRMPDRPPRPPVAPPRALVRPPTVPVNPPRAPVAPPVAPPRPPVRSPTVP---- 340
Query: 507 ACSGGCRASAPRCRAQAPA 563
+APR PA
Sbjct: 341 VTPSTTPVTAPRLPVAPPA 359
>ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300834|gb|EAA12979.1|
ENSANGP00000004917 [Anopheles gambiae str. PEST]
Length = 257
Score = 52.4 bits (124), Expect = 8e-06
Identities = 53/159 (33%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Frame = +3
Query: 264 RFPRSSRMAFRWS*LRRVLLTRSPPPANPRWSESTPPARAL--WRACRRSWTRAPT*SRP 437
R PRS F PP + +PPARA WR+ RS R+P
Sbjct: 93 RRPRSPPFCFPPPAAAPARRAHRPPRCRCAPAAPSPPARAFGPWRSSTRSSARSPQSPTA 152
Query: 438 PVRPPPPPPLR*SRPPTAPWRTRACSGG-CRASAPRCRAQAPA*TAPSPGWAAR*RSPLA 614
R P P R + R A SG CR + R APA A SP A+ P++
Sbjct: 153 GWRSFAPTPRRPCTAADSGTRRTAASGTRCRGTPSGTRCSAPAPCAASP--ASARSPPVS 210
Query: 615 PRRARATRAVAAWAARSPTAASAPSRPAMRPRLTPPRPP 731
PR AR+ + S +ASAPSR + PR RPP
Sbjct: 211 PRTARSA------SRPSSRSASAPSRAS--PRTCSCRPP 241
Score = 43.1 bits (100), Expect = 0.005
Identities = 45/121 (37%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = -1
Query: 734 PRRARRRKPRPHSWAARS*SRCRTARRPRRHRPCSP-RPPRRQRTPSPCCPPR*RRGSCW 558
PRR R RP S RT RP R RP +P R R +P P P RR C+
Sbjct: 14 PRRPRSSTDRPTPPRTAS-GPSRTPARPPRTRPSAPGRIRRAAASPPPFPPAPARRRGCF 72
Query: 557 -----CLRSAARC*GSAAPAARSRSPWRCWWP--ASP*RRRRRRSHGWP*SGWCARPASP 399
+ ARC S+ A R RSP C+ P A+P RR R P CA PA+P
Sbjct: 73 SGDFSASAAPARCCPSSCCARRPRSPPFCFPPPAAAPARRAHR-----PPRCRCA-PAAP 126
Query: 398 T 396
+
Sbjct: 127 S 127
EST assemble image
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clone |
accession |
position |
| 1 |
LCL037d09_r |
AV628146 |
1 |
234 |
| 2 |
HC083e07_r |
AV638225 |
6 |
439 |
| 3 |
MX212b01_r |
BP089679 |
14 |
349 |
| 4 |
HC010d07_r |
AV632614 |
18 |
522 |
| 5 |
LCL088f10_r |
AV631094 |
407 |
749 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute