Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001837A_C01 KCC001837A_c01
(537 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB90216.1| putative chloroplast membrane-associated 30 kD p... 142 4e-33
sp|Q03943|IM30_PEA Membrane-associated 30 kDa protein, chloropla... 134 8e-31
ref|NP_564846.1| expressed protein [Arabidopsis thaliana] gi|744... 134 1e-30
ref|ZP_00071905.1| COG1842: Phage shock protein A (IM30), suppre... 116 2e-25
ref|NP_897970.1| similar to chloroplast membrane-associated 30 k... 108 4e-23
>dbj|BAB90216.1| putative chloroplast membrane-associated 30 kD protein [Oryza
sativa (japonica cultivar-group)]
gi|21952843|dbj|BAC06258.1| putative chloroplast
membrane-associated 30 kD protein [Oryza sativa
(japonica cultivar-group)]
Length = 317
Score = 142 bits (357), Expect = 4e-33
Identities = 70/130 (53%), Positives = 94/130 (71%)
Frame = +2
Query: 146 CCGAGEPVLSAPARIVNSWATNVVSNAEDPEKLLDQVVEEMQGDLIKMRQAAATILAQQK 325
C G +L +R+V S+A V+S+ EDPEK+LDQ V EM DL KMRQA A +LA QK
Sbjct: 53 CNGIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQK 112
Query: 326 QIETKYKQAQTTADDWLRRAELAVQKGEDDLAKEALKRRKTYQEQADQLKVQVDQLSGAS 505
++E KYK A+ +DDW RRA+LA+QKG++DLA+EALKRRK+Y + A LK Q+DQ G
Sbjct: 113 RLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVV 172
Query: 506 GDVLNNTRAL 535
++++NTR L
Sbjct: 173 ENLVSNTRVL 182
>sp|Q03943|IM30_PEA Membrane-associated 30 kDa protein, chloroplast precursor (M30)
gi|1076532|pir||S47966 probable lipid transfer protein
M30 precursor - garden pea gi|169107|gb|AAA53545.1| IM30
Length = 323
Score = 134 bits (337), Expect = 8e-31
Identities = 68/144 (47%), Positives = 97/144 (67%)
Frame = +2
Query: 104 FALLSLAVRRQPQGCCGAGEPVLSAPARIVNSWATNVVSNAEDPEKLLDQVVEEMQGDLI 283
F ++ +A + G G + AR+V S+A +VS EDPEK+L+Q V EM DL
Sbjct: 42 FRVMRIAKPVRGGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLT 101
Query: 284 KMRQAAATILAQQKQIETKYKQAQTTADDWLRRAELAVQKGEDDLAKEALKRRKTYQEQA 463
KMRQA A +LA QK++E KYK AQ +++W R+A+LA+QKGE+DLA+EALKRRK++ + A
Sbjct: 102 KMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNA 161
Query: 464 DQLKVQVDQLSGASGDVLNNTRAL 535
LK Q+DQ ++++NTR L
Sbjct: 162 SSLKAQLDQQKSVVDNLVSNTRLL 185
>ref|NP_564846.1| expressed protein [Arabidopsis thaliana] gi|7447853|pir||T02347
probable lipid transfer protein T8F5.2 - Arabidopsis
thaliana gi|3335333|gb|AAC27135.1|AAC27135 Similar to
chloroplast membrane-associated 30KD protein precursor
(IM30) gb|M73744 from Pisum sativum. ESTs gb|N37557,
gb|W43887 and gb|AA042479 come from this gene.
[Arabidopsis thaliana] gi|15027977|gb|AAK76519.1|
unknown protein [Arabidopsis thaliana]
gi|21436055|gb|AAM51228.1| unknown protein [Arabidopsis
thaliana]
Length = 330
Score = 134 bits (336), Expect = 1e-30
Identities = 63/118 (53%), Positives = 90/118 (75%)
Frame = +2
Query: 182 ARIVNSWATNVVSNAEDPEKLLDQVVEEMQGDLIKMRQAAATILAQQKQIETKYKQAQTT 361
+R+V S+A ++S+ EDPEK+L+Q V EM DL KMRQA A +LA QKQ++ KYK AQ +
Sbjct: 79 SRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQS 138
Query: 362 ADDWLRRAELAVQKGEDDLAKEALKRRKTYQEQADQLKVQVDQLSGASGDVLNNTRAL 535
+DDW +RA+LA+ KG++DLA+EALKRRK++ + A LK Q+DQ G ++++NTR L
Sbjct: 139 SDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLL 196
>ref|ZP_00071905.1| COG1842: Phage shock protein A (IM30), suppresses sigma54-dependent
transcription [Trichodesmium erythraeum IMS101]
Length = 221
Score = 116 bits (290), Expect = 2e-25
Identities = 53/102 (51%), Positives = 79/102 (76%)
Frame = +2
Query: 185 RIVNSWATNVVSNAEDPEKLLDQVVEEMQGDLIKMRQAAATILAQQKQIETKYKQAQTTA 364
R++ + +++SNAEDPEK+L+Q ++ MQ DL+K+RQ A +A QKQ E + QA++TA
Sbjct: 9 RVIRANVNSLISNAEDPEKILEQTIKNMQNDLVKLRQVVAEAIATQKQTERQSYQAKSTA 68
Query: 365 DDWLRRAELAVQKGEDDLAKEALKRRKTYQEQADQLKVQVDQ 490
D+W RRA LA+QKG+++LA+EAL RR +YQE A +KVQ++Q
Sbjct: 69 DEWYRRAHLALQKGQENLAREALTRRNSYQETATVMKVQMEQ 110
>ref|NP_897970.1| similar to chloroplast membrane-associated 30 kD protein
[Synechococcus sp. WH 8102] gi|33633189|emb|CAE08394.1|
similar to chloroplast membrane-associated 30 kD protein
[Synechococcus sp. WH 8102]
Length = 263
Score = 108 bits (270), Expect = 4e-23
Identities = 54/105 (51%), Positives = 73/105 (69%)
Frame = +2
Query: 185 RIVNSWATNVVSNAEDPEKLLDQVVEEMQGDLIKMRQAAATILAQQKQIETKYKQAQTTA 364
R+V + A VS+ EDP K+LDQ V +MQ DL+K+RQA A +A QK++ ++ +QA + A
Sbjct: 15 RLVRANANAAVSSMEDPSKILDQSVADMQSDLVKLRQAVALAIASQKRLRSQAEQASSQA 74
Query: 365 DDWLRRAELAVQKGEDDLAKEALKRRKTYQEQADQLKVQVDQLSG 499
W RAELA++KGE+DLA+EAL RRKT+QE A L QV G
Sbjct: 75 TTWYERAELALKKGEEDLAREALTRRKTFQETATSLNAQVQSQDG 119
