KCC001825A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001825A_C01 KCC001825A_c01
tacaGTACAGTATAAACAAATCCAGTTGCTTTGCAGCCAACCCCTCAGAGTCTGGCTTGA
GTTCCACCCTTTTTTCCGGACAGAAGGGCGTCAGTGCACAGCGACCCAGGCGCCATGGCG
CTCGAGGCGGGGATCATGATGGTCACCATCGAGTACGCCAAGGATCTCAAGGATAAGGAC
TGGTTTGGCAAACAGGACCCCTACGCAGTCCTGAAGGTGGGCGGCCAGACGTTCCGCACC
AAGACGCACACGGACGGCGGCAAGAACCCGGTGTGGAACGAGACCTTCGCCGTCAACGTC
ATCAACGACAACACCGCCGACCTCACGCTGTACGACTCGGACGTGGGCAAGGACGACGTC
ATCGGCACCGCCACCGTCGGCCTGGCCAAGGCCCGCGAGCAGGGCAGCGACTACCTGCAG
TGCCCGGTGAAGACCAAGAGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001825A_C01 KCC001825A_c01
         (442 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF21062.1| calcium-dependent protein kinase [Dunaliella tert...    77  7e-14
ref|NP_567956.1| C2 domain-containing protein [Arabidopsis thali...    76  9e-14
pir||T05421 hypothetical protein F28A23.90 - Arabidopsis thalian...    71  3e-12
ref|XP_310255.1| ENSANGP00000015103 [Anopheles gambiae] gi|21293...    63  8e-10
pir||T34345 hypothetical protein T12A2.15 - Caenorhabditis elegans     63  1e-09

>gb|AAF21062.1| calcium-dependent protein kinase [Dunaliella tertiolecta]
          Length = 595

 Score = 76.6 bits (187), Expect = 7e-14
 Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
 Frame = +1

Query: 145 TIEYAKDLKDKDWFGKQDPYAVLKVGGQTFRTKTHTDGGKNPVWNETFA-VNVINDNTAD 321
           T+  A+ +KD +  GKQ PYAVL VG +TF++ T   GG +PVWN+TF+  NV  D++  
Sbjct: 7   TLVSARGIKDVEIVGKQSPYAVLTVGPKTFKSGTANGGGSDPVWNQTFSFTNVTPDSSVK 66

Query: 322 LTLYDSDVGKDDV-IGTATVGLAKAREQGSDYLQCPVKTK 438
           L +++S+V   DV IG     + KA   G D L  P+ TK
Sbjct: 67  LEIFNSNVVLRDVAIGGCKAPMDKALSAGKDELTLPIITK 106

>ref|NP_567956.1| C2 domain-containing protein [Arabidopsis thaliana]
           gi|15724316|gb|AAL06551.1|AF412098_1 AT4g34150/F28A23_90
           [Arabidopsis thaliana] gi|23397247|gb|AAN31905.1|
           unknown protein [Arabidopsis thaliana]
          Length = 247

 Score = 76.3 bits (186), Expect = 9e-14
 Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
 Frame = +1

Query: 121 LEAGIMMVTIEYAKDLKDKDWFGKQDPYAVLKVGGQTFRTKTHTDGGKNPVWNETFAVNV 300
           ++  I+ VT+   + LKD +WF +QDPY VL+ GG++ RT+T TDGGKN V+ E F   +
Sbjct: 7   IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66

Query: 301 INDNTADLTL---YDSDVGKDDVIGTATVGLAKAREQGSDYLQCPVKTKS 441
           I +   DL +     + +  DD IG AT+ L K   Q  D     +++K+
Sbjct: 67  I-EGLRDLKVAVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKT 115

>pir||T05421 hypothetical protein F28A23.90 - Arabidopsis thaliana
           gi|2911047|emb|CAA17557.1| putative protein [Arabidopsis
           thaliana] gi|7270364|emb|CAB80132.1| putative protein
           [Arabidopsis thaliana]
          Length = 279

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = +1

Query: 166 LKDKDWFGKQDPYAVLKVGGQTFRTKTHTDGGKNPVWNETFAVNVINDNTADLTL---YD 336
           LKD +WF +QDPY VL+ GG++ RT+T TDGGKN V+ E F   +I +   DL +     
Sbjct: 44  LKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTLI-EGLRDLKVAVWNS 102

Query: 337 SDVGKDDVIGTATVGLAKAREQGSDYLQCPVKTKS 441
           + +  DD IG AT+ L K   Q  D     +++K+
Sbjct: 103 NTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKT 137

>ref|XP_310255.1| ENSANGP00000015103 [Anopheles gambiae] gi|21293830|gb|EAA05975.1|
           ENSANGP00000015103 [Anopheles gambiae str. PEST]
          Length = 848

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = +1

Query: 130 GIMMVTIEYAKDLKDKDWF----GKQDPYAVLKVGGQTFRTKTHTDGGKNPVWN---ETF 288
           G++ + +  AKDL  KD      GK DPYA++ VG Q FRT+T  D   NP W+   E F
Sbjct: 319 GVLRIHVVEAKDLMKKDISVLGKGKSDPYAIISVGAQQFRTQT-IDNTVNPKWDYWCEAF 377

Query: 289 AVNVINDNTADLTLYDSDVGKDDVIGTATVGLAKAREQG 405
            ++  +  T  + + D D G+D+++G ATV ++   + G
Sbjct: 378 -IHAESGQTLQVVINDEDAGEDELLGRATVEISSVTKNG 415

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 30/97 (30%), Positives = 44/97 (44%), Gaps = 2/97 (2%)
 Frame = +1

Query: 118 ALEAGIMMVTIEYAKDLKDKDWFGKQDPYAVLKVGGQTFRTKTH--TDGGKNPVWNETFA 291
           ++   ++ V I+ AK+L       + DPY VL VG +  +T     TD    PVW + F 
Sbjct: 461 SMSTALLTVFIDSAKNLPQARQQSQPDPYLVLSVGKKNEQTSVQMRTDA---PVWEQGFT 517

Query: 292 VNVINDNTADLTLYDSDVGKDDVIGTATVGLAKAREQ 402
             V N +   L L   D    + IGT T  L+   E+
Sbjct: 518 FLVGNPDNDTLQLKVIDQKTGNTIGTLTYILSALMEK 554

>pir||T34345 hypothetical protein T12A2.15 - Caenorhabditis elegans
          Length = 572

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
 Frame = +1

Query: 130 GIMMVTIEYAKDLKDKDWF----GKQDPYAVLKVGGQTFRTKTHTDGGKNPVWNETF--A 291
           G++ + I  AK+L+++D      GK DPYA ++VG Q F+T+T  D   NP+WNE F   
Sbjct: 305 GVVRLKIIEAKNLENRDISFIKKGKSDPYAEIQVGSQFFKTRT-IDDDLNPIWNEYFEAV 363

Query: 292 VNVINDNTADLTLYDSDVGKDDVIGTATVGLAKAREQGS 408
           V+  +     + L+D D GKD+ +G  +V L   + +G+
Sbjct: 364 VDQADGQKLRIELFDEDQGKDEELGRLSVDLKLVQAKGT 402



EST assemble image


clone accession position
1 LC041f06_r AV621844 1 412
2 HC079a03_r AV637890 5 452
3 HC005f06_r AV632237 16 256
4 LC080e02_r AV632237 151 314




Chlamydomonas reinhardtii
Kazusa DNA Research Institute