Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001812A_C01 KCC001812A_c01
(519 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O04433|SR14_ORYSA SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN (... 92 3e-18
emb|CAE03503.1| OSJNBa0053K19.11 [Oryza sativa (japonica cultiva... 86 4e-16
sp|O04421|SR14_ARATH Signal recognition particle 14 kDa protein ... 84 8e-16
ref|NP_181892.1| signal recognition particle protein 14kD, ATSRP... 84 8e-16
pdb|1914| Signal Recognition Particle Alu Rna Binding Heterodi... 66 3e-10
>sp|O04433|SR14_ORYSA SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN (SRP14)
gi|7489557|pir||T04105 probable signal recognition
particle 14K chain - rice gi|2208962|emb|CAA71204.1|
signal recognition particle subunit 14 [Oryza sativa
(japonica cultivar-group)]
Length = 132
Score = 92.4 bits (228), Expect = 3e-18
Identities = 50/103 (48%), Positives = 66/103 (63%), Gaps = 5/103 (4%)
Frame = +3
Query: 159 MVLLEPDPFLSELHKMYERN-KSGSVWITMKRSNMKPRKAKKPDPTR----EYVCLIRAN 323
MV+L+PDPFLSEL MYER+ + GSVW+TMKRS+MK + K + EY CL+RA
Sbjct: 1 MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60
Query: 324 DGKRHISTTVSPTQYAKFSQSMVIIMKGAMADTLKRKEKKKDK 452
DGK++I T +S +Y KF S ++K M KR+ K K K
Sbjct: 61 DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKK 103
>emb|CAE03503.1| OSJNBa0053K19.11 [Oryza sativa (japonica cultivar-group)]
Length = 428
Score = 85.5 bits (210), Expect = 4e-16
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 14/113 (12%)
Frame = +3
Query: 156 KMVLLEPDPFLSELHKMYERN-KSGSVWITMKRSNMKPRKAKKPDPTR----EYVCLIRA 320
+MV+L+PDPFLSEL MYER+ + GSVW+TMKRS+MK + K + EY CL+RA
Sbjct: 287 RMVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRA 346
Query: 321 NDGKRHISTT---------VSPTQYAKFSQSMVIIMKGAMADTLKRKEKKKDK 452
DGK++I T +S +Y KF S ++K M KR+ K K K
Sbjct: 347 TDGKKNICTAGSIVQLRAELSAKEYLKFQASYATVLKAHMHALKKRERKDKKK 399
>sp|O04421|SR14_ARATH Signal recognition particle 14 kDa protein (SRP14)
gi|2208946|emb|CAA71202.1| signal recognition particle
subunit 14 [Arabidopsis thaliana]
Length = 121
Score = 84.3 bits (207), Expect = 8e-16
Identities = 46/103 (44%), Positives = 64/103 (61%), Gaps = 5/103 (4%)
Frame = +3
Query: 159 MVLLEPDPFLSELHKMYERNKS-GSVWITMKRSNMKP----RKAKKPDPTREYVCLIRAN 323
MVLL+ DPFL+EL M+E++K GSVW+T+KRS++K RK + EY CLIRA
Sbjct: 1 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60
Query: 324 DGKRHISTTVSPTQYAKFSQSMVIIMKGAMADTLKRKEKKKDK 452
DGK+ +ST+V + +F S I+K M KR+ K + K
Sbjct: 61 DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKK 103
>ref|NP_181892.1| signal recognition particle protein 14kD, ATSRP14 -related
[Arabidopsis thaliana] gi|25350234|pir||F84868
hypothetical protein At2g43640 [imported] - Arabidopsis
thaliana gi|2281106|gb|AAB64042.1| putative signal
recognition particle protein 14kD, ATSRP14 [Arabidopsis
thaliana] gi|21618107|gb|AAM67157.1| putative 14kD
signal recognition particle protein ATSRP14 [Arabidopsis
thaliana] gi|27765064|gb|AAO23653.1| At2g43640
[Arabidopsis thaliana]
Length = 121
Score = 84.3 bits (207), Expect = 8e-16
Identities = 46/103 (44%), Positives = 64/103 (61%), Gaps = 5/103 (4%)
Frame = +3
Query: 159 MVLLEPDPFLSELHKMYERNKS-GSVWITMKRSNMKP----RKAKKPDPTREYVCLIRAN 323
MVLL+ DPFL+EL M+E++K GSVW+T+KRS++K RK + EY CLIRA
Sbjct: 1 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60
Query: 324 DGKRHISTTVSPTQYAKFSQSMVIIMKGAMADTLKRKEKKKDK 452
DGK+ +ST+V + +F S I+K M KR+ K + K
Sbjct: 61 DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKK 103
>pdb|1914| Signal Recognition Particle Alu Rna Binding Heterodimer, Srp914
Length = 232
Score = 65.9 bits (159), Expect = 3e-10
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Frame = +3
Query: 156 KMVLLEPDPFLSELHKMYER-NKSGSVWITMK----RSNMKPRKAKKPD-PTREYVCLIR 317
+MVLLE + FL+EL +++++ SGSV+IT+K R+ PRK+ E CL+R
Sbjct: 19 RMVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKSSVEGLEPAENKCLLR 78
Query: 318 ANDGKRHISTTVSPTQYAKFSQSMVIIMKGAMADTLKRKEKKKDK 452
A DGKR IST VS + KF + +++ M KR +K K K
Sbjct: 79 ATDGKRKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKSK 123
