KCC001806A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001806A_C01 KCC001806A_c01
GTGGCAGAGGCCATAACCTTTACTCTTTCACACCAACCACTCGCAACAATGCCTGCCCTT
GTGAGCGTCACCTCGCGCATCGGCGCCCAGCACCGCGCAGCTGCCCCCTCCAAGGGCGAG
CGTGCGCGTGCCCGCCACAATCGCTCGTGCTGAGCCCAAGTTCACTCTGGACAACAGCCG
CAACAGCGCGGAGGGCTATGTGGAGAAGGACACTGCGGGCCAGAGGCAACATGTACCCCA
CCGTGATGAAGCCGTTCGAGGCGGGCAGCGCCTCCGACACTGTGCAGCAGGACAACTTCA
ACAACGCCCTGGCTGGCCGGTGCCTCCGTGGCCTGCCTGGGTGCCATTGCCCTGGGCCTG
ACCGCGCTTCTCAACGCGGGCAGCAGCACCCCGGCTGTGGACACTGAGGACTTCTCCGCC
TACGACTCGCTGTCATCCTACGCCGCCAAGTTCTCGCCCCGCGCCGCCCCCGCCCCTGTC
GCCGCCCCCGTCGCCGAGCCCGTGGCCGTGGAGGCGCCCGCCGTGGCGTCCGAGTAAAGG
CAGCAGCAATAGCAGCCGGACACGGAGTGGGCTCCTTGTAGCTGCTTGGCCGGAGCTGTA
GCTACTGCGAAGTTGCGGCTGCAGCTTTGCAGGGAATCAGCATCTCGGTGTGGTGGTCTA
GCCGAGGACTGACGGCGTCAGCTGGCGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001806A_C01 KCC001806A_c01
         (689 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_330608.1| predicted protein [Neurospora crassa] gi|289263...    56  5e-07
emb|CAB88653.2| hypothetical protein [Neurospora crassa]               54  2e-06
pir||T48814 hypothetical protein 15E6.220 [imported] - Neurospor...    54  2e-06
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    54  3e-06
pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA...    53  4e-06

>ref|XP_330608.1| predicted protein [Neurospora crassa] gi|28926365|gb|EAA35342.1|
           predicted protein [Neurospora crassa]
          Length = 580

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 51/161 (31%), Positives = 65/161 (39%), Gaps = 4/161 (2%)
 Frame = +2

Query: 32  TNHSQQCLPL*ASPRASAPSTAQLPPPRASVRVPATIARAEPKFTLDNSRNSAEGYVEKD 211
           +N SQQ  P   +   + PS+  L PP  +   P    R  P    +  RNS  G   + 
Sbjct: 271 SNFSQQSAP---TTYQTEPSSLYLQPPYLT---PIDFRRPSPT---NLHRNSCSGAYPRP 321

Query: 212 TAGQRQHVP----HRDEAVRGGQRLRHCAAGQLQQRPGWPVPPWPAWVPLPWA*PRFSTR 379
            + + QH      H+ + +R           Q QQRP  P    P   P+    P     
Sbjct: 322 LSSRDQHQQQIRTHQQQEIRERPLPSLPLPVQPQQRPQRPPRSSPPVSPVVVVFP----- 376

Query: 380 AAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPPPSPSP 502
            A P      TSPPT+   P PP   P PPPP SPPP P P
Sbjct: 377 -APP------TSPPTSPLPPLPPLQPPPPPPPSSPPPPPPP 410

>emb|CAB88653.2| hypothetical protein [Neurospora crassa]
          Length = 1992

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 37/114 (32%), Positives = 44/114 (38%)
 Frame = +2

Query: 215 AGQRQHVPHRDEAVRGGQRLRHCAAGQLQQRPGWPVPPWPAWVPLPWA*PRFSTRAAAPR 394
           + Q Q  P  D+  +  Q+ +H    Q QQ+P  P PP PA                   
Sbjct: 11  SAQPQPQPQIDQQQQQQQQQQHQEQKQQQQQPPPPPPPPPA------------------- 51

Query: 395 LWTLRTSPPTTRCHPTPPSSRPAPPPPLSPPPSPSPWPWRRPPWRPSKGSSNSS 556
                 SPP     P PP   P PPPP  PPP P P P   PP  PS+     S
Sbjct: 52  ------SPPP----PPPPPPPPPPPPPPPPPPEPEPQPAPPPPETPSQSQPQQS 95

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 56/160 (35%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
 Frame = +2

Query: 83   APSTAQ--LPPPRASVRVPA-TIARAEPKFTLDNSRNSAEGYVEKDTAGQRQHVPHRDEA 253
            APS AQ   P P +S  VPA T+A A                     A     VP + + 
Sbjct: 1853 APSAAQSVAPAPVSSTPVPAATVAPASTVAAAPTPTRVTAAPAALSAATNPAPVPSQPQH 1912

Query: 254  VRGGQRLRHCAAGQLQQRPGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRC 433
               GQ      A   QQRP       PA    P A P   T AA PR  TL   PP    
Sbjct: 1913 QITGQ------APAQQQRP-------PAQAQAP-ATPTI-TSAAPPRPPTLAPPPPPP-- 1955

Query: 434  HPTPPSSRPAPPPPLSPPPSPSPWPWRRPPWRPSKGSSNS 553
             P PP+  P PPPP  PPP+ +P P    P  P+  SS S
Sbjct: 1956 -PPPPTEDPPPPPP--PPPAEAPPPPPPTPLMPTSASSAS 1992

>pir||T48814 hypothetical protein 15E6.220 [imported] - Neurospora crassa
          Length = 1952

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 37/114 (32%), Positives = 44/114 (38%)
 Frame = +2

Query: 215 AGQRQHVPHRDEAVRGGQRLRHCAAGQLQQRPGWPVPPWPAWVPLPWA*PRFSTRAAAPR 394
           + Q Q  P  D+  +  Q+ +H    Q QQ+P  P PP PA                   
Sbjct: 16  SAQPQPQPQIDQQQQQQQQQQHQEQKQQQQQPPPPPPPPPA------------------- 56

Query: 395 LWTLRTSPPTTRCHPTPPSSRPAPPPPLSPPPSPSPWPWRRPPWRPSKGSSNSS 556
                 SPP     P PP   P PPPP  PPP P P P   PP  PS+     S
Sbjct: 57  ------SPPP----PPPPPPPPPPPPPPPPPPEPEPQPAPPPPETPSQSQPQQS 100

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 56/160 (35%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
 Frame = +2

Query: 83   APSTAQ--LPPPRASVRVPA-TIARAEPKFTLDNSRNSAEGYVEKDTAGQRQHVPHRDEA 253
            APS AQ   P P +S  VPA T+A A                     A     VP + + 
Sbjct: 1813 APSAAQSVAPAPVSSTPVPAATVAPASTVAAAPTPTRVTAAPAALSAATNPAPVPSQPQH 1872

Query: 254  VRGGQRLRHCAAGQLQQRPGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRC 433
               GQ      A   QQRP       PA    P A P   T AA PR  TL   PP    
Sbjct: 1873 QITGQ------APAQQQRP-------PAQAQAP-ATPTI-TSAAPPRPPTLAPPPPPP-- 1915

Query: 434  HPTPPSSRPAPPPPLSPPPSPSPWPWRRPPWRPSKGSSNS 553
             P PP+  P PPPP  PPP+ +P P    P  P+  SS S
Sbjct: 1916 -PPPPTEDPPPPPP--PPPAEAPPPPPPTPLMPTSASSAS 1952

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 34/82 (41%), Positives = 39/82 (47%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPP 487
           P  P PP+PA  P+P + P      A P   T  T P  +   P PPS  P PP P  P 
Sbjct: 273 PPPPRPPFPANTPMPPSPPSPPPSPAPP---TPPTPPSPSPPSPVPPSPAPVPPSPAPPS 329

Query: 488 PSPSPWPWRRPPWRPSKGSSNS 553
           P+PSP P   PP  PS   S S
Sbjct: 330 PAPSPPPSPAPP-TPSPSPSPS 350

 Score = 48.9 bits (115), Expect = 7e-05
 Identities = 36/83 (43%), Positives = 40/83 (47%), Gaps = 1/83 (1%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTP-PSSRPAPPPPLSP 484
           P  PVPP PA VP     P  +  + AP       SPP +   PTP PS  P+P P  SP
Sbjct: 310 PPSPVPPSPAPVP-----PSPAPPSPAP-------SPPPSPAPPTPSPSPSPSPSPSPSP 357

Query: 485 PPSPSPWPWRRPPWRPSKGSSNS 553
            PSPSP P   P   PS   S S
Sbjct: 358 SPSPSPSPSPSPIPSPSPKPSPS 380

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 28/78 (35%), Positives = 35/78 (43%), Gaps = 2/78 (2%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPS--SRPAPPPPLS 481
           P  P P  PA  P P   P    R   P    +  SPP+    P PP+  + P+P PP  
Sbjct: 254 PAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSP 313

Query: 482 PPPSPSPWPWRRPPWRPS 535
            PPSP+P P    P  P+
Sbjct: 314 VPPSPAPVPPSPAPPSPA 331

 Score = 42.0 bits (97), Expect = 0.009
 Identities = 34/97 (35%), Positives = 39/97 (40%), Gaps = 18/97 (18%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRP-APPPPLSP 484
           P  P PP PA    P   P   +  A P       +PP+    P PPS +P APPPP SP
Sbjct: 215 PAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPS----PAPPSPKPPAPPPPPSP 270

Query: 485 PPS-----------------PSPWPWRRPPWRPSKGS 544
           PP                  PSP P   PP  P+  S
Sbjct: 271 PPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPS 307

 Score = 41.6 bits (96), Expect = 0.012
 Identities = 35/78 (44%), Positives = 38/78 (47%), Gaps = 2/78 (2%)
 Frame = +2

Query: 308 PGWPVPPWPAWV-PLPWA*PRFSTRAAAPRLWTLRTSP-PTTRCHPTPPSSRPAPPPPLS 481
           P  P PP PA   P P A P  S  + AP    L  SP P +   P PPS  P P PP  
Sbjct: 116 PAPPSPPSPAPPSPSPPAPPSPSPPSPAP---PLPPSPAPPSPSPPVPPSPSP-PVPPSP 171

Query: 482 PPPSPSPWPWRRPPWRPS 535
            PPSP+P P   PP  PS
Sbjct: 172 APPSPTP-PSPSPPVPPS 188

 Score = 40.8 bits (94), Expect = 0.020
 Identities = 30/67 (44%), Positives = 35/67 (51%), Gaps = 2/67 (2%)
 Frame = +2

Query: 308 PGWPVPPWPAWV-PLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSP 484
           P  PVPP PA   P P   P  +  + AP +       P +   P+PPS  PAPP P SP
Sbjct: 181 PSPPVPPSPAPPSPAPPVPPSPAPPSPAPPV-------PPSPAPPSPPS--PAPPSPPSP 231

Query: 485 -PPSPSP 502
            PPSPSP
Sbjct: 232 APPSPSP 238

 Score = 40.8 bits (94), Expect = 0.020
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPS-SRPAPPPPLSP 484
           P  PVPP P+  P+P +    S    +P      +  P +   P PPS + P+P PP+ P
Sbjct: 155 PSPPVPPSPS-PPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPP 213

Query: 485 PPSPSPWPWRRPPWRPSKGSSNSS 556
            P+P   P   PP  PS    + S
Sbjct: 214 SPAPPSPPSPAPPSPPSPAPPSPS 237

 Score = 40.4 bits (93), Expect = 0.026
 Identities = 34/104 (32%), Positives = 41/104 (38%), Gaps = 1/104 (0%)
 Frame = +2

Query: 248 EAVRGGQRLRHCAAGQLQQRPGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTT 427
           + V GG  + +C        P  P P  P+  P   A P     + AP        P   
Sbjct: 30  QCVPGG--IFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPA 87

Query: 428 RCHPTPPSSRPAPPPPLSP-PPSPSPWPWRRPPWRPSKGSSNSS 556
              P PPS  P  P P SP PPSP+P P   PP  PS    + S
Sbjct: 88  PPSPAPPSPAPPSPAPPSPAPPSPAP-PSPAPPSPPSPAPPSPS 130

 Score = 40.0 bits (92), Expect = 0.033
 Identities = 31/83 (37%), Positives = 37/83 (44%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPP 487
           P  P PP PA  P   A P  +  + AP      +  P +   P+PPS  P  P P   P
Sbjct: 78  PPSPAPPSPA--PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSP-PAP 134

Query: 488 PSPSPWPWRRPPWRPSKGSSNSS 556
           PSPSP P   PP  PS    + S
Sbjct: 135 PSPSP-PSPAPPLPPSPAPPSPS 156

 Score = 40.0 bits (92), Expect = 0.033
 Identities = 29/78 (37%), Positives = 36/78 (45%), Gaps = 2/78 (2%)
 Frame = +2

Query: 308 PGWPVPPWPAWV-PLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSP 484
           P  P PP P    P P + P  +  + AP      +  P +   P+P    PAPP P  P
Sbjct: 60  PPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPP 119

Query: 485 -PPSPSPWPWRRPPWRPS 535
            PPSP+P P   PP  PS
Sbjct: 120 SPPSPAP-PSPSPPAPPS 136

 Score = 39.7 bits (91), Expect = 0.044
 Identities = 36/87 (41%), Positives = 41/87 (46%), Gaps = 11/87 (12%)
 Frame = +2

Query: 308 PGWPVPPWPAWV------PLPWA*PRFSTRAAAPRLWTLRTSP-PTTRCHPTPPSSRPAP 466
           P  PVPP PA        P P   P  +  + AP    +  SP P +   P PPS  PAP
Sbjct: 163 PSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAP---PVPPSPAPPSPAPPVPPS--PAP 217

Query: 467 PPPLSP----PPSPSPWPWRRPPWRPS 535
           P P SP    PPSP+P P   PP  PS
Sbjct: 218 PSPPSPAPPSPPSPAP-PSPSPPAPPS 243

 Score = 38.5 bits (88), Expect = 0.097
 Identities = 33/79 (41%), Positives = 39/79 (48%), Gaps = 4/79 (5%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPP---PL 478
           P  P PP PA  P+P +    S  + AP       SPP+    P PPS  P  PP   P 
Sbjct: 199 PPSPAPPSPA-PPVPPSPAPPSPPSPAP------PSPPS----PAPPSPSPPAPPSPVPP 247

Query: 479 SP-PPSPSPWPWRRPPWRP 532
           SP PPSP+P P  +PP  P
Sbjct: 248 SPAPPSPAP-PSPKPPAPP 265

 Score = 38.5 bits (88), Expect = 0.097
 Identities = 25/76 (32%), Positives = 28/76 (35%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPP 487
           P  P PP P+    P   P      A P       SPP       P  + P PP P  P 
Sbjct: 147 PPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPS 206

Query: 488 PSPSPWPWRRPPWRPS 535
           P+P   P   PP  PS
Sbjct: 207 PAPPVPPSPAPPSPPS 222

 Score = 38.5 bits (88), Expect = 0.097
 Identities = 31/83 (37%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSP- 484
           P  P PP PA  P   A P  +  + AP      +  P +   P PPS  P  PP  SP 
Sbjct: 83  PPSPAPPSPA--PPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPP 140

Query: 485 ------PPSPSPWPWRRPPWRPS 535
                 PPSP+P P   PP  PS
Sbjct: 141 SPAPPLPPSPAP-PSPSPPVPPS 162

 Score = 37.7 bits (86), Expect = 0.17
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSR-PAPPPPLSP 484
           P  P PP PA    P   P   +  A P       SPP+    P PPS   P+P PP+ P
Sbjct: 108 PPSPAPPSPAPPSPPSPAPPSPSPPAPPS-----PSPPSP-APPLPPSPAPPSPSPPVPP 161

Query: 485 PPSPSPWPWRRPP 523
            PSP   P   PP
Sbjct: 162 SPSPPVPPSPAPP 174

 Score = 37.4 bits (85), Expect = 0.22
 Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +2

Query: 308 PGWPVPPWPAWV-PLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPS-SRPAPPPPLS 481
           P  P PP PA   P P + P  +  + +P       +PP+    P+PPS + P PP P  
Sbjct: 103 PPSPAPPSPAPPSPAPPSPPSPAPPSPSP------PAPPS----PSPPSPAPPLPPSPAP 152

Query: 482 PPPSPSPWPWRRPPWRPS 535
           P PSP   P   PP  PS
Sbjct: 153 PSPSPPVPPSPSPPVPPS 170

>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
           extensin [Volvox carteri]
          Length = 464

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 32/79 (40%), Positives = 36/79 (45%)
 Frame = +2

Query: 317 PVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPPPSP 496
           P PP P   P P   PR S     P+  +    PP  R  P+PP  R +P PP   PP P
Sbjct: 280 PSPPPPVASPPPPPPPRVSPSPPPPQPVSSPPPPPPPRPSPSPPPPRSSPSPPPPSPPPP 339

Query: 497 SPWPWRRPPWRPSKGSSNS 553
           SP P R  P  P   SS S
Sbjct: 340 SPPPPRPSPSPPPPRSSPS 358

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 33/92 (35%), Positives = 41/92 (43%), Gaps = 7/92 (7%)
 Frame = +2

Query: 317 PVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPPPSP 496
           P PP P+  P     PR S     PR  +    PP     P PP + P PPP  SPPP P
Sbjct: 329 PSPPPPSPPPPSPPPPRPSPSPPPPRS-SPSPPPPVVSPPPPPPRASPPPPPASSPPPPP 387

Query: 497 SPWPWRRPPWRPSKGSSNS-------SRTRSG 571
            P P   PP  P   ++ +       SR+R+G
Sbjct: 388 RPPPPSPPPSPPPPATAAANPPSPAPSRSRAG 419

 Score = 48.5 bits (114), Expect = 9e-05
 Identities = 30/72 (41%), Positives = 31/72 (42%)
 Frame = +2

Query: 317 PVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPPPSP 496
           P PP P   P P   PR S             SPP  R  P+PP   P PP P  P PSP
Sbjct: 301 PPPPQPVSSPPPPPPPRPSP------------SPPPPRSSPSPPPPSPPPPSPPPPRPSP 348

Query: 497 SPWPWRRPPWRP 532
           SP P R  P  P
Sbjct: 349 SPPPPRSSPSPP 360

 Score = 45.8 bits (107), Expect = 6e-04
 Identities = 36/91 (39%), Positives = 43/91 (46%), Gaps = 11/91 (12%)
 Frame = +2

Query: 284 AAGQLQQRPGWPVPPWPAWVPLPWA*----PRFSTRAAAPRLWT-----LRTSPPTTRCH 436
           AA  +Q  P  P PP  +  P P A     P  +TR+  PR  T     L  SPP  +  
Sbjct: 212 AAVVVQTTPSPPPPPRVSTSPPPPARVSSSPPPATRSPPPRRITSPSPVLTASPPLPKTS 271

Query: 437 PTPPSSRP-APPPPL-SPPPSPSPWPWRRPP 523
           P PP   P +PPPP+ SPPP P P     PP
Sbjct: 272 PPPPPRVPPSPPPPVASPPPPPPPRVSPSPP 302

 Score = 32.3 bits (72), Expect = 7.0
 Identities = 25/78 (32%), Positives = 29/78 (37%)
 Frame = +2

Query: 308 PGWPVPPWPAWVPLPWA*PRFSTRAAAPRLWTLRTSPPTTRCHPTPPSSRPAPPPPLSPP 487
           P  P PP P   P P A    +  + AP        P  TR  P PP     PP    PP
Sbjct: 386 PPRPPPPSPPPSPPPPATAAANPPSPAPSRSRAGGPPLGTRPPPPPPEDDAPPPDYYFPP 445

Query: 488 PSPSPWPWRRPPWRPSKG 541
           P     P   PP + + G
Sbjct: 446 PQDMSPP---PPKKKATG 460



EST assemble image


clone accession position
1 HC037c02_r AV634739 1 608
2 MX012d08_r BP086591 4 476
3 HC008e11_r AV632464 5 636
4 HC085d05_r AV638359 8 456
5 MX217b12_r BP090001 8 415
6 HC063d07_r AV636725 16 567
7 HC086e11_r AV638451 18 589
8 MX012d07_r BP086590 100 503
9 LCL034e09_r AV627961 106 400
10 LC046a01_r AV622055 108 604
11 MX211a01_r BP089629 108 414
12 HC041g12_r AV635098 108 605
13 LC029h05_r AV621008 108 590
14 MX222a06_r BP090317 111 520
15 MX239d09_r BP091473 113 463
16 MX253d12_r BP092382 113 523
17 MX216b12_r BP089937 115 519
18 MX247a11_r BP091955 115 549
19 MX236b05_r BP091262 116 537
20 MX245g11_r BP091892 116 618
21 MX028b12_r BP087212 119 519
22 HC054a11_r AV636018 119 595
23 HC051a11_r AV635795 119 555
24 HC030g01_r AV634222 119 610
25 HC029d10_r AV634113 119 618
26 HC002h06_r AV632016 119 549
27 MX008c06_r BP086412 119 498
28 HC055h02_r AV636152 119 547
29 MX034h01_r BP087451 119 502
30 LC054g11_r AV622804 119 658
31 MX016d01_r BP086769 119 543
32 MX045d06_r BP087870 119 571
33 HC024e09_r AV633730 119 569
34 MX021d06_r BP086957 119 601
35 HC056b11_r AV636182 119 561
36 HC035g05_r AV634625 119 588
37 MX245c01_r BP091849 121 564
38 MX260h10_r BP092928 121 399
39 HC094b11_r AV639036 123 522
40 HC100f01_r AV639531 124 553
41 HC042h10_r AV635181 124 617
42 HC059g06_r AV636460 126 665
43 HC008h05_r AV632491 126 660
44 HC028f02_r AV634050 126 597
45 MX028f09_r BP087237 126 609
46 HC033h04_r AV634475 126 481
47 HC048g11_r AV635632 126 580
48 HC053g04_r AV635990 126 549
49 HC010d01_r AV632609 128 561
50 HC076c12_r AV637693 137 582
51 HC067b11_r AV636996 315 794




Chlamydomonas reinhardtii
Kazusa DNA Research Institute