Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001796A_C01 KCC001796A_c01
(478 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01657|RSP6_CHLRE FLAGELLAR RADIAL SPOKE PROTEIN 6 gi|322385|... 121 1e-39
sp|Q01656|RSP4_CHLRE FLAGELLAR RADIAL SPOKE PROTEIN 4 gi|322384|... 50 9e-07
ref|ZP_00010124.1| hypothetical protein [Rhodopseudomonas palust... 38 0.053
pir||T13229 dachshund protein isoform 1 - fruit fly (Drosophila ... 38 0.069
ref|NP_723970.1| dachshund CG4952-PD [Drosophila melanogaster] g... 38 0.069
>sp|Q01657|RSP6_CHLRE FLAGELLAR RADIAL SPOKE PROTEIN 6 gi|322385|pir||B44498 radial spoke
protein 6 - Chlamydomonas reinhardtii
gi|167437|gb|AAA33093.1| flagellar radial spoke protein
Length = 459
Score = 121 bits (303), Expect(2) = 1e-39
Identities = 64/70 (91%), Positives = 65/70 (92%)
Frame = +2
Query: 254 KALKQRWLKVLEDRPVNAVEALETSVLSTPPAANLSVPLVPAASAAAAAAAVAKASLFGD 433
+ LK KVLEDRPVNAVEALETSVLSTPPAANLSVPLVPAASAAAAAAAVAKASLFGD
Sbjct: 25 EGLKAALAKVLEDRPVNAVEALETSVLSTPPAANLSVPLVPAASAAAAAAAVAKASLFGD 84
Query: 434 PEPVLDPESG 463
PEPVLDPESG
Sbjct: 85 PEPVLDPESG 94
Score = 63.2 bits (152), Expect(2) = 1e-39
Identities = 32/33 (96%), Positives = 33/33 (99%)
Frame = +1
Query: 181 MAADVGQALAFLQQVKTTQGASIYEGLKAALAE 279
MAADVGQALAFLQQVKTTQGASIYEGLKAALA+
Sbjct: 1 MAADVGQALAFLQQVKTTQGASIYEGLKAALAK 33
>sp|Q01656|RSP4_CHLRE FLAGELLAR RADIAL SPOKE PROTEIN 4 gi|322384|pir||A44498 radial spoke
protein 4 - Chlamydomonas reinhardtii
gi|167436|gb|AAA33092.1| flagellar radial spoke protein
Length = 465
Score = 50.1 bits (118), Expect(2) = 9e-07
Identities = 30/64 (46%), Positives = 38/64 (58%), Gaps = 2/64 (3%)
Frame = +2
Query: 278 KVLEDRPVNAVEALETSVLSTPPAANL--SVPLVPAASAAAAAAAVAKASLFGDPEPVLD 451
KVLED+P NAV+ LETS+L + S PLVP A A A S+FGDPE ++
Sbjct: 35 KVLEDQPKNAVDLLETSLLVKKSTFDPKESSPLVPIPVAPDATQTQAAVSIFGDPELPIN 94
Query: 452 PESG 463
P +G
Sbjct: 95 PATG 98
Score = 23.5 bits (49), Expect(2) = 9e-07
Identities = 12/28 (42%), Positives = 15/28 (52%)
Frame = +1
Query: 178 AMAADVGQALAFLQQVKTTQGASIYEGL 261
A V QALA+LQ G S+Y+ L
Sbjct: 2 AAVDSVAQALAYLQVHSPQDGTSMYDHL 29
>ref|ZP_00010124.1| hypothetical protein [Rhodopseudomonas palustris]
Length = 210
Score = 38.1 bits (87), Expect = 0.053
Identities = 21/79 (26%), Positives = 39/79 (48%)
Frame = +2
Query: 230 QHKAHQSMKALKQRWLKVLEDRPVNAVEALETSVLSTPPAANLSVPLVPAASAAAAAAAV 409
+ +A + A + + +ED P E + + P + PA+++AA+AA++
Sbjct: 124 KREARAARSAAAKSSAETIEDEPEQPATVAEPAPVVVPATELAPQTVEPASASAASAASI 183
Query: 410 AKASLFGDPEPVLDPESGR 466
A+A L PEPV E+ +
Sbjct: 184 AEAVLLDRPEPVKPAETAK 202
>pir||T13229 dachshund protein isoform 1 - fruit fly (Drosophila melanogaster)
gi|624297|gb|AAC46507.1| Dachshund variant 1
Length = 1074
Score = 37.7 bits (86), Expect = 0.069
Identities = 22/48 (45%), Positives = 28/48 (57%)
Frame = -2
Query: 477 DR*VRPDSGSSTGSGSPNRLAFATAAAAAAAEAAGTRGTLRFAAGGVD 334
DR RP SGS+ + LA A AAAAAAA AA + G ++ G+D
Sbjct: 971 DRDERPPSGSAASVAAEGSLAAAAAAAAAAAAAAASNGKGPWSYPGID 1018
>ref|NP_723970.1| dachshund CG4952-PD [Drosophila melanogaster]
gi|22946630|gb|AAN10943.1| CG4952-PD [Drosophila
melanogaster]
Length = 1074
Score = 37.7 bits (86), Expect = 0.069
Identities = 22/48 (45%), Positives = 28/48 (57%)
Frame = -2
Query: 477 DR*VRPDSGSSTGSGSPNRLAFATAAAAAAAEAAGTRGTLRFAAGGVD 334
DR RP SGS+ + LA A AAAAAAA AA + G ++ G+D
Sbjct: 971 DRDERPPSGSAASVAAEGSLAAAAAAAAAAAAAAASNGKGPWSYPGID 1018
