KCC001793A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001793A_C01 KCC001793A_c01
cgcgatgacaacatgaatgttgtcaacgtgggcgccgccgggccggagctggaggcggag
cgcatcacaggcgtcaacagGTACTACTTCTCTTACCGTGTCCAGAACAGGACATCCGGC
GGGTACGACTCCGGCATCACCAGCAGCTTCAACCGGAAGGTGCTGGTCCACTCCTACAAC
GGCATCCAGTCGGAGCGCGTGTTTGGCTTCAAGCCCAATCTGATTGACTGGGGCCCCAAC
TTCCAGTCCAAGACCAGCACCTGGACGTCGCCGTTCGTGGCCCTTCGAGGCGGCCTGGGC
GGCGCTGTCAGGGTGGTGGTGGTGAGCACCTCCGACACCCAGGCGGTGGTCAATATCTGC
CGCATGACGGAGACCCGCGAGACCACCTGCAACGATGGGTTTGACAACGACTGCGATGGC
GCCGCGGACGATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001793A_C01 KCC001793A_c01
         (433 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718...   212  1e-54
sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete ly...   207  3e-53
dbj|BAB68383.1| matrix metalloprotease 2 [Chlamydomonas reinhard...   169  1e-41
dbj|BAB85218.1| matrix metalloproteinase [Volvox carteri f. naga...    70  9e-12
emb|CAC83675.1| mucin 5 [Homo sapiens]                                 44  4e-04

>dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718395|dbj|BAB68384.1|
           gametolysin [Chlamydomonas reinhardtii]
          Length = 639

 Score =  212 bits (539), Expect = 1e-54
 Identities = 98/144 (68%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
 Frame = +1

Query: 1   RDDNMNVVNVGAAGPELEAERITGVNRYYFSYRVQNRTSGGYDSGITSSFNRKVLVHSYN 180
           RDDNM VVNVGA   ++ A + TG   YYFSYR++N T+GGYDSG+TS F++KVLVH+YN
Sbjct: 489 RDDNMIVVNVGAESTQIGAAKATGAQAYYFSYRIKNTTAGGYDSGLTSDFHKKVLVHAYN 548

Query: 181 GIQSERVFGFKPNLIDWGPNFQSKTSTWTSPFVALRGGLGGAVRVVVVSTSDTQAVVNIC 360
           GIQSERVFGFK NL+DWGPNFQS+++TWTSPF+A+   LGG VR+VV STSDTQAVV+IC
Sbjct: 549 GIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFLAVTNDLGGGVRLVVQSTSDTQAVVDIC 608

Query: 361 RMTET-RETTCNDGFDNDCDGAAD 429
           R+TE  +E +C+DG DNDCDG  D
Sbjct: 609 RITENGKELSCDDGIDNDCDGLQD 632

>sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete lytic enzyme) (GLE)
           gi|541537|pir||A45287 gamete lytic enzyme (EC 3.4.24.-)
           precursor - Chlamydomonas reinhardtii
           gi|167439|gb|AAA33094.1| cell wall lytic enzyme
           gi|217895|dbj|BAA01400.1| GLE preproprotein
           [Chlamydomonas reinhardtii]
          Length = 638

 Score =  207 bits (527), Expect = 3e-53
 Identities = 97/145 (66%), Positives = 118/145 (80%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1   RDDNMNVVNVGAAGPELEAERITGVNRYYFSYRVQNRTSGGYDSGITSSFNRKVLVHSYN 180
           RDDNM VVNVGA      A + TG   YYFSYR++N T+GGYDSG+T  F++KVLVH+YN
Sbjct: 488 RDDNMIVVNVGAQSTRDGAMKATGAQAYYFSYRIKNTTAGGYDSGLTLDFHKKVLVHAYN 547

Query: 181 GIQSERVFGFKPNLIDWGPNFQSKTSTWTSPFVALRGGLGGAVRVVVVSTSDTQAVVNIC 360
           GIQSERVFGFK NL+DWGPNFQS+++TWTSPF+A   GLGG VR+VV STSDTQAVV+IC
Sbjct: 548 GIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFLAYNNGLGGGVRLVVQSTSDTQAVVDIC 607

Query: 361 RMTET-RETTCNDGFDNDCDGAADD 432
           R++E  +E +C+DG DNDCDG  D+
Sbjct: 608 RISENGKELSCDDGIDNDCDGLQDN 632

>dbj|BAB68383.1| matrix metalloprotease 2 [Chlamydomonas reinhardtii]
           gi|15718397|dbj|BAB68385.1| matrix metalloprotease 2
           [Chlamydomonas reinhardtii]
          Length = 635

 Score =  169 bits (427), Expect = 1e-41
 Identities = 87/159 (54%), Positives = 108/159 (67%), Gaps = 16/159 (10%)
 Frame = +1

Query: 1   RDDNMNVVNVGAAGPELEAERITGVNRYYFSYRVQNRTSGGYDSGITSSFNRKVLVHSYN 180
           RDDNM VVNVGA   ++ AE  TG   YYFSYR++N T+GGYDSG+TS F++KV+VH++N
Sbjct: 470 RDDNMIVVNVGARSTQVGAETATGAQAYYFSYRIKNTTAGGYDSGLTSDFHKKVVVHAFN 529

Query: 181 GIQSERVFGFKPNLIDWGPNFQSKTSTWTSPFVALRGGLGGAV---------------RV 315
           GIQSERVFGFKP+L+DWGPNFQSK+           G  GG +                 
Sbjct: 530 GIQSERVFGFKPSLLDWGPNFQSKSEPVFQNDDGTSGCHGGHLDFTLPGGYQRSGRWREA 589

Query: 316 VVVSTSDTQAVVNICRMTET-RETTCNDGFDNDCDGAAD 429
            V STSDTQAVV+ICR+TE  +E +C+DG DNDC+G  D
Sbjct: 590 GVQSTSDTQAVVDICRITENGKELSCDDGVDNDCNGLQD 628

>dbj|BAB85218.1| matrix metalloproteinase [Volvox carteri f. nagariensis]
          Length = 625

 Score = 69.7 bits (169), Expect = 9e-12
 Identities = 50/153 (32%), Positives = 75/153 (48%), Gaps = 17/153 (11%)
 Frame = +1

Query: 25  NVGAAGP-ELEAERITGVNRYYFSYRV------------QNRTSGGYDSGITSSFNRKVL 165
           N G AG   L     T  N  Y  Y +            ++RTS  YD+ + +  N +V 
Sbjct: 365 NRGVAGRWVLPPTAATDTNALYLRYNINGTPFPNIFVSFRSRTSR-YDNALATYMNNRVF 423

Query: 166 VHSYNGIQSERVFGFKPNLIDWGPNFQSKTSTWTSPFVALR----GGLGGAVRVVVVSTS 333
           VH++NG  +ER +  +  L+       +    +TSPF+        GLG  +RV+ ++  
Sbjct: 424 VHNFNGSATERDYN-RTLLVA----VMAAGDVYTSPFLGNTTFDDSGLGVKIRVISIAAG 478

Query: 334 DTQAVVNICRMTETRETTCNDGFDNDCDGAADD 432
            T A V +CR+TE  ET+C DG DNDC+G  D+
Sbjct: 479 -TSATVEVCRLTEKVETSCFDGDDNDCNGLTDE 510

>emb|CAC83675.1| mucin 5 [Homo sapiens]
          Length = 1349

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
 Frame = +2

Query: 23  STWAPPGRSWRRSASQASTGTTSLTVSRTGHPAGTTPAS-PAASTGRCWSTPTTASSRSA 199
           ST + P  S   + S   T TTS + +      GTTP+  P  ST    +T TT+++ ++
Sbjct: 11  STTSTPTSS---TTSTPQTSTTSASTTSITSGPGTTPSPVPTTSTTSAPTTSTTSAATTS 67

Query: 200 CLASSPI*LTGAPTSSPRPAPGRRRSWPFEAAWAALSGWWW*APPTPRRWSISAA*RR-- 373
            +++     T APT+S   A    ++       + +      +PPT    S S A +   
Sbjct: 68  TISAPTTSTTSAPTTSTTSASTASKTSGLGTTPSPIPTTSTTSPPTTSTTSASTASKTSG 127

Query: 374 PARPPATMGLTTTAMAPRT 430
           P   P+ +  T+T  APRT
Sbjct: 128 PGTTPSPVPTTSTIFAPRT 146

 Score = 36.6 bits (83), Expect = 0.082
 Identities = 24/68 (35%), Positives = 36/68 (52%)
 Frame = +2

Query: 59  SASQASTGTTSLTVSRTGHPAGTTPASPAASTGRCWSTPTTASSRSACLASSPI*LTGAP 238
           S  Q ST  +S T S T  P  +T +SP  ST    +T TT++  ++  ++    ++ AP
Sbjct: 777 STPQTST-ISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAP 835

Query: 239 TSSPRPAP 262
           TSS   AP
Sbjct: 836 TSSTTSAP 843

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
 Frame = +2

Query: 23   STWAPPGRSWRRSASQASTGT-----TSLTVSRTGHPAGTTPA------SPAASTGRCWS 169
            ST + P  S   S + ++T T     TS   S T   +GTTP+      + +AST    S
Sbjct: 1160 STISAPTTSTISSPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVPTTSTTSASTTSTTS 1219

Query: 170  TPTTASSRSACLASSPI---*LTGAPTSSPRPAPGRRRSWPFEAAWAALSGWWW*APPTP 340
             PTT+++       SP+    +T A T+S   AP  R +    ++  +  G      PT 
Sbjct: 1220 APTTSTTSGPGTTPSPVPSTSITSAATTSTTSAPTTRTTSAPTSSMTSGPGTTPSPVPTT 1279

Query: 341  RRWS--ISAA*RRPARPPATMGLTTTAMAPRT 430
               S   ++    P   P+ +  T+T  AP T
Sbjct: 1280 STTSAPTTSTTSGPGTTPSPVPTTSTTSAPIT 1311

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 26/77 (33%), Positives = 38/77 (48%), Gaps = 1/77 (1%)
 Frame = +2

Query: 35  PPGRSWRRSASQASTGTTSLTVSRTGHPAGTTPASPAASTGRCWSTPTTASSRSACLASS 214
           PP ++   S+ Q S  TT +T S T     +T ++P  ST    S P+T S+ +    S+
Sbjct: 617 PPAQTQSTSSWQKSRTTTLVTSSITSTTQTSTTSAPTTSTTPA-SIPSTTSAPTTSTTSA 675

Query: 215 P-I*LTGAPTSSPRPAP 262
           P    T APT+S    P
Sbjct: 676 PTTSTTSAPTTSTTSTP 692

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
 Frame = +2

Query: 59   SASQASTGTTSLTVSRTGHPAGTTPASPAASTGRCWSTPTTASSRSACLASSPI*LTGAP 238
            S+ Q S  TT +T S T  P  +T ++P  ST    STP+T S+ +          T AP
Sbjct: 1058 SSWQKSRTTTLVTTSTTSTPQTSTTSAPTTSTIPA-STPSTTSAPTTS-------TTSAP 1109

Query: 239  TSSPRPAPGRR-RSWPFEAAWAALSGWWW*APPTPRRWSISAA*RRPARPPATMGLTTTA 415
            T+S   AP  R  S P  +   A +     AP T    S ++A   P     +   T+T 
Sbjct: 1110 TTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTT----STNSA---PTTSTISASTTSTI 1162

Query: 416  MAPRT 430
             AP T
Sbjct: 1163 SAPTT 1167

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
 Frame = +2

Query: 74   STGTTSL-TVSRTGHPAGTTPASPAASTGRCWSTPTTASSRSACLASSPI*LTGAPTSSP 250
            +T TTS  T S T  P  +T + P  +     ST  T+++ ++  ++     T APTSS 
Sbjct: 1206 TTSTTSASTTSTTSAPTTSTTSGPGTTPSPVPSTSITSAATTSTTSAPTTRTTSAPTSSM 1265

Query: 251  RPAPGRRRS-WPFEAAWAA-----LSGWWW*APPTPRRWSISA----A*RRPARPPATMG 400
               PG   S  P  +  +A      SG      P P   + SA        P   P+ + 
Sbjct: 1266 TSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPITSTTSGPGSTPSPVP 1325

Query: 401  LTTTAMAPRT 430
             T+T  AP T
Sbjct: 1326 TTSTTSAPTT 1335

 Score = 33.5 bits (75), Expect = 0.69
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
 Frame = +2

Query: 23  STWAPPGRSWRRSASQASTGTTSL-TVSRTGHPAGTTPASPAASTGRCWSTPT------- 178
           ST + P  S   + S  +T TTS  T S T  P  TT ++P +ST    +T T       
Sbjct: 663 STTSAPTTS---TTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTISAPTTS 719

Query: 179 --------TASSRSACLASSPI*LTGAPTSSPRPAP 262
                   T S+ +A   S+P   + APT++   AP
Sbjct: 720 TISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAP 755

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 27/92 (29%), Positives = 38/92 (40%), Gaps = 12/92 (13%)
 Frame = +2

Query: 23   STWAPPGRSWRRSASQASTGTTSLT------------VSRTGHPAGTTPASPAASTGRCW 166
            +T AP   S   + +  S  TTS T             S T  P  +T +SP  ST    
Sbjct: 736  TTSAPTSTSSAPTTNTTSAPTTSTTSAPITSTISAPTTSTTSTPQTSTISSPTTSTTPTP 795

Query: 167  STPTTASSRSACLASSPI*LTGAPTSSPRPAP 262
             T TT+S  ++  ++     T APT+S    P
Sbjct: 796  QTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTP 827

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 21/69 (30%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
 Frame = +2

Query: 59  SASQASTGTTSL-TVSRTGHPAGTTPASPAASTGRCWSTPTTASSRSACLASSPI*LTGA 235
           S + A T T+S  T + T  P  +T ++P  ST    +T TT++ +++ ++S        
Sbjct: 735 STTSAPTSTSSAPTTNTTSAPTTSTTSAPITSTISAPTTSTTSTPQTSTISS-------- 786

Query: 236 PTSSPRPAP 262
           PT+S  P P
Sbjct: 787 PTTSTTPTP 795

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 22/71 (30%), Positives = 34/71 (46%), Gaps = 2/71 (2%)
 Frame = +2

Query: 59  SASQASTGTT--SLTVSRTGHPAGTTPASPAASTGRCWSTPTTASSRSACLASSPI*LTG 232
           S + A T +T  + T S    P  +T +SP  ST    +T TT++  S+  ++     T 
Sbjct: 389 STTSAPTSSTISARTTSIISAPTTSTTSSPTTSTTSATTTSTTSAPTSSTTSTPQTSKTS 448

Query: 233 APTSSPRPAPG 265
           A TSS   + G
Sbjct: 449 AATSSTTSSSG 459



EST assemble image


clone accession position
1 CM100f08_r AV392849 1 433
2 LCL034b06_r AV627937 125 397




Chlamydomonas reinhardtii
Kazusa DNA Research Institute