Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001788A_C01 KCC001788A_c01
(597 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S27224 N-methyl-D-aspartate receptor epsilon-4 chain - mouse 40 0.025
dbj|BAB90472.1| P0510C12.17 [Oryza sativa (japonica cultivar-gro... 39 0.042
emb|CAD19511.1| UL36 protein [Pseudorabies virus] 34 0.15
gb|AAD42859.1|AF159694_1 serine/threonine kinase PKN9 [Myxococcu... 37 0.27
pir||T08179 LRG5 protein - Chlamydomonas reinhardtii gi|1644370|... 30 0.28
>pir||S27224 N-methyl-D-aspartate receptor epsilon-4 chain - mouse
Length = 1323
Score = 40.0 bits (92), Expect = 0.025
Identities = 49/213 (23%), Positives = 71/213 (33%), Gaps = 16/213 (7%)
Frame = -2
Query: 596 ARDSPPVRYMPLDRSRLVKPPPSPSAKFSRTSDVRHIWPRRAHTTPARKTTYVLGDHLHS 417
A+ PP + +P +PPP P+ R W R T P G H +
Sbjct: 903 AKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAALADGFHRYY 962
Query: 416 QTCAPTSEDRVMRGRGVPMTNSSKRRAR-------TAQPPVPITSSVQKATCRAAAALPP 258
P +G G+ ++ R A T QPP S A PP
Sbjct: 963 GPIEP-------QGLGLGEARAAPRGAAGRPLSPPTTQPPQKPPPSYFAIVREQEPAEPP 1015
Query: 257 *MLYASKPKTTVCAPQRSTQRLGMLLCL---------ATNSGLCVLDKMGQTWMAGRARY 105
+ P + P + +G LC A ++G + + + W+ RA
Sbjct: 1016 AGAFPGFP-SPPAPPAAAAAAVGPPLCRLAFEDESPPAPSAGRVLTPRASRCWVGARA-- 1072
Query: 104 IARSCSPATTGPRVRAAATAAPSCCCCCCQPPP 6
AR+ P P R TA P C +P P
Sbjct: 1073 -ARALGPR---PHHRRVRTAPPPCAYLDLEPSP 1101
>dbj|BAB90472.1| P0510C12.17 [Oryza sativa (japonica cultivar-group)]
Length = 256
Score = 39.3 bits (90), Expect = 0.042
Identities = 41/135 (30%), Positives = 52/135 (38%), Gaps = 15/135 (11%)
Frame = -3
Query: 364 P*PTAQKGVPVRHNLPCPSLPQSRKQLAAPLLHYLRR---CSMLRSLKPLCA--PRNVPL 200
P P P R P R+ A L H R C R PL R P
Sbjct: 27 PAPCRPASSPTRTGAVAVVSPSPRRVAVASLCHRRRVPFCCHCRRPAAPLSRVNSRPAPP 86
Query: 199 SGLACCSALRLTAACVC----WIRWARPGWLAGPATSPAAVLQPQRAPVCAPQQLPRLPA 32
+A S RL A C W+R A P P SP+ L P+RAP + ++ R+ A
Sbjct: 87 RHVASPSPRRLQPAACCRRRRWLRRAEPS--PAPLVSPSPSLAPRRAPYQSRRRRRRISA 144
Query: 31 AA------AAASPRL 5
+ A ASPR+
Sbjct: 145 SCPVRRCRAIASPRV 159
>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
Length = 3084
Score = 33.9 bits (76), Expect(2) = 0.15
Identities = 32/130 (24%), Positives = 46/130 (34%), Gaps = 5/130 (3%)
Frame = -2
Query: 584 PPVRYMPLDRSRLVKPPPSPSAKFSRTSDVRHIWPRRAHTTPARKTTYVLGDHLHSQTCA 405
PP + L + + PP P AK T+ + P+ PA G A
Sbjct: 2175 PPAKPAELTPAAKLAPPAPPPAKPVETTPLTKPQPQPQQGPPAAHKKPAAGT---KAAAA 2231
Query: 404 PTSEDRVMRGRGVPMTNSSKRRARTA-----QPPVPITSSVQKATCRAAAALPP*MLYAS 240
P + R P +SS R+ + + +PP P+ + AT A PP A
Sbjct: 2232 PKQQPR----EPAPKPHSSPRKIQPSLKARIEPPPPVINPPYPATAPAPETAPPEAPQAQ 2287
Query: 239 KPKTTVCAPQ 210
P PQ
Sbjct: 2288 PPAAAKPTPQ 2297
Score = 22.3 bits (46), Expect(2) = 0.15
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 118 AGPATSPAAVLQPQRAPVCAPQQLPRLPAAAAAAS 14
A T+P A Q Q Q P P+AA AA+
Sbjct: 2325 AAATTAPKATPQTQPPTRAQTQTAPPPPSAATAAA 2359
>gb|AAD42859.1|AF159694_1 serine/threonine kinase PKN9 [Myxococcus xanthus]
Length = 589
Score = 36.6 bits (83), Expect = 0.27
Identities = 33/107 (30%), Positives = 44/107 (40%)
Frame = -3
Query: 331 RHNLPCPSLPQSRKQLAAPLLHYLRRCSMLRSLKPLCAPRNVPLSGLACCSALRLTAACV 152
R P P P+ L PL R + +RS PL +++PL G + L L A
Sbjct: 368 RPTTPVPVPPE----LNTPLTSQELRAAGVRS--PL--RKHLPLLGAVSFALLLLAGAAA 419
Query: 151 CWIRWARPGWLAGPATSPAAVLQPQRAPVCAPQQLPRLPAAAAAASP 11
IR A+ L P+ P P++ PQQ AAA SP
Sbjct: 420 VVIRGAKAPALVPPSIMPQQAAAPEQTAAVTPQQAAAPEQAAAVPSP 466
>pir||T08179 LRG5 protein - Chlamydomonas reinhardtii gi|1644370|gb|AAB17561.1|
LRG5 [Chlamydomonas reinhardtii]
gi|1763289|gb|AAB39840.1| LRG5 [Chlamydomonas
reinhardtii]
Length = 640
Score = 29.6 bits (65), Expect(2) = 0.28
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -2
Query: 101 ARSCSPATTGPRVRAAATAAPSCCC-----CCC 18
AR C+P R A + PS CC CCC
Sbjct: 602 ARPCAPCGCSMRAPTATSCTPSHCCTARGRCCC 634
Score = 25.8 bits (55), Expect(2) = 0.28
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = -3
Query: 223 CAPRNVPLSGLACCSALRLTAACVCWIRWARP 128
C P CC C CW WARP
Sbjct: 577 CRGSRAPRCNWVCCCL----PGCCCWGCWARP 604
