Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001786A_C01 KCC001786A_c01
(484 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94HF1|IF3B_ORYSA Eukaryotic translation initiation factor 3 ... 121 5e-27
ref|NP_195051.1| expressed protein [Arabidopsis thaliana] gi|233... 110 9e-24
gb|AAD40193.1| HSPC029 [Homo sapiens] 108 4e-23
ref|NP_082935.1| RIKEN cDNA 1200009C21 [Mus musculus] gi|2339662... 108 4e-23
ref|XP_214886.1| similar to RIKEN cDNA 1200009C21 [Rattus norveg... 108 4e-23
>sp|Q94HF1|IF3B_ORYSA Eukaryotic translation initiation factor 3 subunit 11 (eIF-3 p25)
(eIF3k) gi|15217293|gb|AAK92637.1|AC079633_17 Unknown
protein [Oryza sativa]
Length = 226
Score = 121 bits (303), Expect = 5e-27
Identities = 57/140 (40%), Positives = 95/140 (67%)
Frame = +2
Query: 65 YSPDKLPQLEAYVDEQVANRSWSLDANVTLLRFYQFSPASVKPAIVAKVLIKAIMQAPAQ 244
Y+PD L LE +V++QV+N++++LDAN++LLR YQF P + IV+++LIKA+M P
Sbjct: 21 YNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPERLSVQIVSRILIKALMAMPGP 80
Query: 245 DYKCCITLLPERLLQSDESVYKVVQLANALETSRFGDFWNAANTCRDLLGGIPGFYESVR 424
D+ C+ L+PE +Q +E ++ L++ LET+RF FW+ A+ R++L +PGF ++++
Sbjct: 81 DFSLCLFLIPEH-VQMEEQFKTLIVLSHYLETARFRQFWDEASKNRNILDVVPGFEQAIQ 139
Query: 425 GFIAHTLVHTYGRVTKRTLA 484
+ H L TY +V + LA
Sbjct: 140 SYAIHVLSLTYQKVPRPVLA 159
>ref|NP_195051.1| expressed protein [Arabidopsis thaliana]
gi|23396627|sp|Q9SZA3|IF3B_ARATH Eukaryotic translation
initiation factor 3 subunit 11 (eIF-3 p25) (eIF3k)
gi|7485649|pir||T05976 hypothetical protein F17M5.10 -
Arabidopsis thaliana gi|4490292|emb|CAB38783.1| putative
protein [Arabidopsis thaliana]
gi|7270273|emb|CAB80042.1| putative protein [Arabidopsis
thaliana] gi|12407753|gb|AAG53637.1|AF291713_1
initiation factor 3k [Arabidopsis thaliana]
gi|14335024|gb|AAK59776.1| AT4g33250/F17M5_10
[Arabidopsis thaliana] gi|15292989|gb|AAK93605.1|
unknown protein [Arabidopsis thaliana]
gi|20147105|gb|AAM10269.1| AT4g33250/F17M5_10
[Arabidopsis thaliana] gi|20258863|gb|AAM14103.1|
unknown protein [Arabidopsis thaliana]
Length = 226
Score = 110 bits (275), Expect = 9e-24
Identities = 54/140 (38%), Positives = 90/140 (63%)
Frame = +2
Query: 65 YSPDKLPQLEAYVDEQVANRSWSLDANVTLLRFYQFSPASVKPAIVAKVLIKAIMQAPAQ 244
++P+ LP LE YV+ V ++++SL+ N+ LLR YQF P + IVA++L+KA+M P
Sbjct: 25 FNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQFEPERMNTHIVARILVKALMAMPTP 82
Query: 245 DYKCCITLLPERLLQSDESVYKVVQLANALETSRFGDFWNAANTCRDLLGGIPGFYESVR 424
D+ C+ L+PER +Q +E ++ L++ LET RF FW+ A R +L +PGF ++++
Sbjct: 83 DFSLCLFLIPER-VQMEEQFKSLIVLSHYLETGRFQQFWDEAAKNRHILEAVPGFEQAIQ 141
Query: 425 GFIAHTLVHTYGRVTKRTLA 484
+ +H L +Y +V + LA
Sbjct: 142 AYASHLLSLSYQKVPRSVLA 161
>gb|AAD40193.1| HSPC029 [Homo sapiens]
Length = 218
Score = 108 bits (269), Expect = 4e-23
Identities = 53/147 (36%), Positives = 87/147 (59%)
Frame = +2
Query: 44 IVTGADRYSPDKLPQLEAYVDEQVANRSWSLDANVTLLRFYQFSPASVKPAIVAKVLIKA 223
++ G DRY+P+ L LE YV+ Q ++ L+AN+ +L+ YQF+PA + + A++L+KA
Sbjct: 14 LLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKA 73
Query: 224 IMQAPAQDYKCCITLLPERLLQSDESVYKVVQLANALETSRFGDFWNAANTCRDLLGGIP 403
+ P D+ C ++ ++ Q + + +++ L + LET F FW A + DLL GI
Sbjct: 74 LTNLPHTDFTLCKCMI-DQAHQEERPIRQILYLGDLLETCHFQAFWKALDENMDLLEGIT 132
Query: 404 GFYESVRGFIAHTLVHTYGRVTKRTLA 484
GF +SVR FI H + TY + + LA
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLA 159
>ref|NP_082935.1| RIKEN cDNA 1200009C21 [Mus musculus]
gi|23396620|sp|Q9DBZ5|IF3B_MOUSE Eukaryotic translation
initiation factor 3 subunit 11 (eIF-3 p25) (eIF3k)
gi|12835998|dbj|BAB23454.1| unnamed protein product [Mus
musculus]
Length = 218
Score = 108 bits (269), Expect = 4e-23
Identities = 53/147 (36%), Positives = 87/147 (59%)
Frame = +2
Query: 44 IVTGADRYSPDKLPQLEAYVDEQVANRSWSLDANVTLLRFYQFSPASVKPAIVAKVLIKA 223
++ G DRY+P+ L LE YV+ Q ++ L+AN+ +L+ YQF+PA + + A++L+KA
Sbjct: 14 LLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKA 73
Query: 224 IMQAPAQDYKCCITLLPERLLQSDESVYKVVQLANALETSRFGDFWNAANTCRDLLGGIP 403
+ P D+ C ++ ++ Q + + +++ L + LET F FW A + DLL GI
Sbjct: 74 LTNLPHTDFTLCKCMI-DQAHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 132
Query: 404 GFYESVRGFIAHTLVHTYGRVTKRTLA 484
GF +SVR FI H + TY + + LA
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLA 159
>ref|XP_214886.1| similar to RIKEN cDNA 1200009C21 [Rattus norvegicus]
Length = 218
Score = 108 bits (269), Expect = 4e-23
Identities = 53/147 (36%), Positives = 87/147 (59%)
Frame = +2
Query: 44 IVTGADRYSPDKLPQLEAYVDEQVANRSWSLDANVTLLRFYQFSPASVKPAIVAKVLIKA 223
++ G DRY+P+ L LE YV+ Q ++ L+AN+ +L+ YQF+PA + + A++L+KA
Sbjct: 14 LLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKA 73
Query: 224 IMQAPAQDYKCCITLLPERLLQSDESVYKVVQLANALETSRFGDFWNAANTCRDLLGGIP 403
+ P D+ C ++ ++ Q + + +++ L + LET F FW A + DLL GI
Sbjct: 74 LTNLPHTDFTLCKCMI-DQAHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 132
Query: 404 GFYESVRGFIAHTLVHTYGRVTKRTLA 484
GF +SVR FI H + TY + + LA
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLA 159
