Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001785A_C01 KCC001785A_c01
(526 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_521343.1| PUTATIVE VGR-RELATED PROTEIN [Ralstonia solanac... 37 0.15
ref|NP_523756.1| Dystroglycan CG18250-PA [Drosophila melanogaste... 35 0.16
ref|NP_725523.2| Dystroglycan CG18250-PB [Drosophila melanogaste... 35 0.16
ref|XP_058975.7| similar to RIKEN cDNA 2510048L02 [Homo sapiens] 33 2.2
pir||S39549 thioglucosidase (EC 3.2.1.147) Myr1.Bn1 precursor - ... 33 2.9
>ref|NP_521343.1| PUTATIVE VGR-RELATED PROTEIN [Ralstonia solanacearum]
gi|17430247|emb|CAD17010.1| PUTATIVE VGR-RELATED PROTEIN
[Ralstonia solanacearum]
Length = 547
Score = 37.0 bits (84), Expect = 0.15
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 116 PTRPPAYSSESKIGPGHLVKYRY*QPPAG----QSPASASVGRS*MPRLLRPQPHSVRPC 283
P RP A S ++G R +PP+G QSP +A G PR +P PC
Sbjct: 417 PRRPRAARSRVRVGASEPSTQRCARPPSGAAERQSPFAARAGAPPQPRSRGSRPCPSAPC 476
Query: 284 KRTLRLLAPIQRESSGS 334
R RL + +S S
Sbjct: 477 GRRRRLRTGVSHPASAS 493
>ref|NP_523756.1| Dystroglycan CG18250-PA [Drosophila melanogaster]
gi|17861488|gb|AAL39221.1| GH09323p [Drosophila
melanogaster] gi|18252640|gb|AAL66369.1|AF461101_1
dystroglycan type II [Drosophila melanogaster]
gi|21645332|gb|AAF58068.2| CG18250-PA [Drosophila
melanogaster]
Length = 997
Score = 35.0 bits (79), Expect(2) = 0.16
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +1
Query: 67 PCLGCAPCTLYTHRHWPDASSRILVRI*NWSRSSRQVPV--LTTASWAISRIRVRWSLVN 240
P P T + HRH A + +L N S Q+P+ + A +
Sbjct: 224 PSTEVPPVTTHAHRHHHGAPNTVL----NELELSTQLPIDDFEGTATATQPTGTATATAI 279
Query: 241 AQTPAASASFCASMQAHAPTPGAH--TAGELWFKMQSTAH 354
A T AA+A+ A+ A A T A TAGE F ++ST H
Sbjct: 280 ASTAAAAAATAAAATATATTANASATTAGESEFHIESTTH 319
Score = 20.8 bits (42), Expect(2) = 0.16
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 413 DNEQPNREVLHPVTPTQHLPPK*YGTPPGS 502
+N N E+ P TPT + TP S
Sbjct: 337 NNSLANNELSTPATPTSSVATTTASTPESS 366
>ref|NP_725523.2| Dystroglycan CG18250-PB [Drosophila melanogaster]
gi|28380800|gb|AAM70943.2| CG18250-PB [Drosophila
melanogaster]
Length = 983
Score = 35.0 bits (79), Expect(2) = 0.16
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +1
Query: 67 PCLGCAPCTLYTHRHWPDASSRILVRI*NWSRSSRQVPV--LTTASWAISRIRVRWSLVN 240
P P T + HRH A + +L N S Q+P+ + A +
Sbjct: 224 PSTEVPPVTTHAHRHHHGAPNTVL----NELELSTQLPIDDFEGTATATQPTGTATATAI 279
Query: 241 AQTPAASASFCASMQAHAPTPGAH--TAGELWFKMQSTAH 354
A T AA+A+ A+ A A T A TAGE F ++ST H
Sbjct: 280 ASTAAAAAATAAAATATATTANASATTAGESEFHIESTTH 319
Score = 20.8 bits (42), Expect(2) = 0.16
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 413 DNEQPNREVLHPVTPTQHLPPK*YGTPPGS 502
+N N E+ P TPT + TP S
Sbjct: 337 NNSLANNELSTPATPTSSVATTTASTPESS 366
>ref|XP_058975.7| similar to RIKEN cDNA 2510048L02 [Homo sapiens]
Length = 412
Score = 33.1 bits (74), Expect = 2.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 52 FSSPSPCLGCAPCTLYTHRHWPDASSRILVRI*NWSRS 165
+S PSP C P + ++W +S + L R +WSR+
Sbjct: 25 YSPPSPSSMCLPANMKCDKYWGSSSDKALERTAHWSRT 62
>pir||S39549 thioglucosidase (EC 3.2.1.147) Myr1.Bn1 precursor - rape
gi|5459292|emb|CAA79989.2| myrosinase, thioglucoside
glucohydrolase [Brassica napus]
Length = 527
Score = 32.7 bits (73), Expect = 2.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 280 WTHRMRLRPQESGHSRATNGRGCGRLPSWRLSVPVLDEMTGTNFRF----GRVCGRTRRA 113
+THR P +SG C W+ + VLDE+ T +RF R+ R +R+
Sbjct: 72 FTHRY---PNKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRS 128
