Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001784A_C01 KCC001784A_c01
(520 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42967|DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplast... 166 1e-40
pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Mode... 164 6e-40
dbj|BAB21078.1| putative uroporphyrinogen decarboxylase [Oryza s... 159 2e-38
ref|NP_442753.1| uroporphyrinogen decarboxylase [Synechocystis s... 159 2e-38
gb|AAL15294.1| AT3g14930/K15M2_7 [Arabidopsis thaliana] 158 5e-38
>sp|Q42967|DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplast precursor (URO-D) (UPD)
gi|1362120|pir||S55732 uroporphyrinogen decarboxylase -
common tobacco gi|1009429|emb|CAA58040.1|
uroporphyrinogen decarboxylase [Nicotiana tabacum]
Length = 391
Score = 166 bits (421), Expect = 1e-40
Identities = 86/156 (55%), Positives = 108/156 (69%), Gaps = 3/156 (1%)
Frame = +1
Query: 61 AFTSARPQRAAALKAQRTSSVTVRATAAPAVAS-APAASGSASDPLMLRAIRGDKVERPP 237
+F+S P +A + ++ R A + A + +A+ PL+L A+RG +VERPP
Sbjct: 7 SFSSISPSSKSAFTSPSNFNLNPRLICCSAGGTVAEPKAINATQPLLLDAVRGKEVERPP 66
Query: 238 VWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWHAFKPDGVILFSDILTPL 417
VW+MRQAGRY K YQ LC+K+P FR+RSE VDL VEISLQPW F+PDGVILFSDILTPL
Sbjct: 67 VWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSDILTPL 126
Query: 418 PGMNIPFDM--APGPIIMDPIRTMAQVEKVTKLDAE 519
GMNIPFD+ GP+I DP+RT A VEKV + E
Sbjct: 127 SGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPE 162
>pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
Uroporphyrinogen-Iii Decarboxylase From Nicotiana
Tabacum: Implications For The Catalytic Mechanism
Length = 353
Score = 164 bits (415), Expect = 6e-40
Identities = 79/116 (68%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
Frame = +1
Query: 178 SASDPLMLRAIRGDKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQ 357
+A+ PL+L A+RG +VERPPVW+MRQAGRY K YQ LC+K+P FR+RSE VDL VEISLQ
Sbjct: 9 NATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQ 68
Query: 358 PWHAFKPDGVILFSDILTPLPGMNIPFDM--APGPIIMDPIRTMAQVEKVTKLDAE 519
PW F+PDGVILFSDILTPL GMNIPFD+ GP+I DP+RT A VEKV + E
Sbjct: 69 PWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPE 124
>dbj|BAB21078.1| putative uroporphyrinogen decarboxylase [Oryza sativa (japonica
cultivar-group)]
Length = 402
Score = 159 bits (403), Expect = 2e-38
Identities = 80/158 (50%), Positives = 108/158 (67%), Gaps = 3/158 (1%)
Frame = +1
Query: 55 TKAFTSARPQRAAALKAQRTSSVTVRATAAPAVASAPAASGSASDPLMLRAIRG-DKVER 231
T AF +A P +++ R R + PA++++ A + S +PL++RA RG D + R
Sbjct: 7 TAAFLAAAPASSSSCTTHR------RRSGLPAISASLATASSTEEPLLVRAARGEDGLPR 60
Query: 232 PPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWHAFKPDGVILFSDILT 411
PP WMMRQAGRY YQ L K+HP+FRERSE +L VEI+LQPW AF PDGVILFSDILT
Sbjct: 61 PPAWMMRQAGRYMAEYQALAKRHPSFRERSETTELIVEITLQPWRAFAPDGVILFSDILT 120
Query: 412 PLPGMNIPFDM--APGPIIMDPIRTMAQVEKVTKLDAE 519
PLP + +PFD+ + GP+I P+R+ QV ++T +D E
Sbjct: 121 PLPAIGVPFDISDSKGPVIQSPVRSEEQVRELTPIDFE 158
>ref|NP_442753.1| uroporphyrinogen decarboxylase [Synechocystis sp. PCC 6803]
gi|1706336|sp|P54224|DCUP_SYNY3 Uroporphyrinogen
decarboxylase (URO-D) (UPD) gi|7436551|pir||S75977
uroporphyrinogen decarboxylase (EC 4.1.1.37) -
Synechocystis sp. (strain PCC 6803)
Length = 350
Score = 159 bits (402), Expect = 2e-38
Identities = 77/112 (68%), Positives = 92/112 (81%), Gaps = 2/112 (1%)
Frame = +1
Query: 190 PLMLRAIRGDKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWHA 369
P +LR RG+ V+RPPVWMMRQAGRY KVY+DL K+P+FRERSE DLA+EISLQPW A
Sbjct: 8 PYLLRVARGEVVKRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWQA 67
Query: 370 FKPDGVILFSDILTPLPGMNIPFDM--APGPIIMDPIRTMAQVEKVTKLDAE 519
F+PDGVI+FSDILTPLPG+ IPFD+ + GPII PIRT AQV+++ LD E
Sbjct: 68 FQPDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQAQVDQLHALDPE 119
>gb|AAL15294.1| AT3g14930/K15M2_7 [Arabidopsis thaliana]
Length = 418
Score = 158 bits (399), Expect = 5e-38
Identities = 73/120 (60%), Positives = 90/120 (74%), Gaps = 2/120 (1%)
Frame = +1
Query: 166 AASGSASDPLMLRAIRGDKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVE 345
A S S+SDPL+++A +G + RPP WMMRQAGRY VYQ L KKHP+FRERSE DL VE
Sbjct: 52 ACSSSSSDPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVE 111
Query: 346 ISLQPWHAFKPDGVILFSDILTPLPGMNIPFDM--APGPIIMDPIRTMAQVEKVTKLDAE 519
ISLQPW AF+PDGVI+FSDILTPLP +PFD+ GP+I PIRT ++++ +D E
Sbjct: 112 ISLQPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPIDFE 171
