Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001780A_C01 KCC001780A_c01
(555 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565301.1| expressed protein [Arabidopsis thaliana] gi|201... 60 2e-08
pir||C84448 hypothetical protein At2g03420 [imported] - Arabidop... 57 2e-07
ref|NP_787279.1| unknown [Tropheryma whipplei str. Twist] gi|284... 45 8e-04
gb|AAH57590.1| 3110043L15Rik protein [Mus musculus] 44 0.001
dbj|BAA82454.1| ORF1 [TT virus] 44 0.001
>ref|NP_565301.1| expressed protein [Arabidopsis thaliana] gi|20197739|gb|AAD17434.2|
hypothetical protein [Arabidopsis thaliana]
gi|26450217|dbj|BAC42227.1| unknown protein [Arabidopsis
thaliana] gi|28827508|gb|AAO50598.1| unknown protein
[Arabidopsis thaliana]
Length = 170
Score = 60.1 bits (144), Expect = 2e-08
Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = +1
Query: 235 LQRSGAAFAASVLLLGSFAPAPASAV----GIESVDILPESFTKPESLSGYADAQKAKLA 402
L +S AAS+ LL S A A + GIESV PE K E L + + A
Sbjct: 43 LCKSTFPLAASLTLLLSPCTAEAGLMSGSPGIESVPG-PE-LPKIEFLDRFNAKNQKFYA 100
Query: 403 QADEAFEKSDTLKALLARSEENRAKNRKEIQNKYCYRQAELGVGDC 540
+ D F+ S LK LL S+ N+ KN +EIQ+KYC R AE GVGDC
Sbjct: 101 ENDARFKDSPLLKKLLENSKLNKEKNEREIQDKYCLRGAEWGVGDC 146
>pir||C84448 hypothetical protein At2g03420 [imported] - Arabidopsis thaliana
Length = 103
Score = 56.6 bits (135), Expect = 2e-07
Identities = 36/76 (47%), Positives = 44/76 (57%)
Frame = +1
Query: 313 GIESVDILPESFTKPESLSGYADAQKAKLAQADEAFEKSDTLKALLARSEENRAKNRKEI 492
GIESV PE K E L + + A+ D F+ S LK LL S+ N+ KN +EI
Sbjct: 6 GIESVPG-PE-LPKIEFLDRFNAKNQKFYAENDARFKDSPLLKKLLENSKLNKEKNEREI 63
Query: 493 QNKYCYRQAELGVGDC 540
Q+KYC R AE GVGDC
Sbjct: 64 QDKYCLRGAEWGVGDC 79
>ref|NP_787279.1| unknown [Tropheryma whipplei str. Twist] gi|28476158|gb|AAO44248.1|
unknown [Tropheryma whipplei str. Twist]
Length = 460
Score = 44.7 bits (104), Expect = 8e-04
Identities = 37/129 (28%), Positives = 57/129 (43%), Gaps = 6/129 (4%)
Frame = -3
Query: 538 SRPHPAPPAGSSTCSGSPCGSWPGSPRCGPVAP*ACRSSQTPRP----PAPASP-SARPR 374
++P PA PA S + + P + + P P A +++Q P+P PAPA P +A+P
Sbjct: 142 AKPAPAKPAPSEATQAAQPPAKPAAAKPAPAKPAATQATQAPKPAAAKPAPAKPAAAKPA 201
Query: 373 SR*ATPAW*TTRAECP-RSQCPRPRPVPGQTTQVEGRWRQTQHPSAAAALRMR*LPHRDE 197
P+ T A+ P + +P P TQ Q P+A A P +
Sbjct: 202 PAKPAPSEATQAAQPPAKPAAAKPAPAKPAATQA----TQATKPAAPAK------PAAAK 251
Query: 196 WAPGEPRPT 170
AP +P P+
Sbjct: 252 PAPAKPAPS 260
Score = 39.7 bits (91), Expect = 0.027
Identities = 30/109 (27%), Positives = 47/109 (42%), Gaps = 7/109 (6%)
Frame = -3
Query: 538 SRPHPAPPAGSSTCSGSPCGSWPGSPRCGPVAP*ACRSSQTPRPPAPASP-SARPRSR*A 362
++P PA PA S + + P + + P P A +++Q +P APA P +A+P
Sbjct: 198 AKPAPAKPAPSEATQAAQPPAKPAAAKPAPAKPAATQATQATKPAAPAKPAAAKPAPAKP 257
Query: 361 TPAW*TTRAECP------RSQCPRPRPVPGQTTQVEGRWRQTQHPSAAA 233
P+ T A+ P + +P P TQ Q P+A A
Sbjct: 258 APSEATQAAQPPAKPAAAKPAAAKPAPAKPAATQA----TQATKPAAPA 302
Score = 37.7 bits (86), Expect = 0.10
Identities = 40/130 (30%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Frame = -3
Query: 538 SRPHPAPPAGS-STCSGSPCGSWPGSPRCGPVAP*ACRSSQTPRP----PAPASP-SARP 377
S P PA PA S +T + P P P + S P+P PAPA P +A+P
Sbjct: 89 SAPAPAKPAPSEATQAAQP----PAKPAAATHSSSTQAPSSAPKPAAAKPAPAKPAAAKP 144
Query: 376 RSR*ATPAW*TTRAECP-RSQCPRPRPVPGQTTQVEGRWRQTQHPSAAAALRMR*LPHRD 200
P+ T A+ P + +P P TQ TQ P AAA P
Sbjct: 145 APAKPAPSEATQAAQPPAKPAAAKPAPAKPAATQA------TQAPKPAAAKPAPAKPAAA 198
Query: 199 EWAPGEPRPT 170
+ AP +P P+
Sbjct: 199 KPAPAKPAPS 208
Score = 35.4 bits (80), Expect = 0.51
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 538 SRPHPAPPAGSSTCSGS-----PCGSWPGSPRCGPVAP*ACRSSQTPRPPAPASPSA 383
++P PA PA S + P + P + + P P A +++Q +P APA P+A
Sbjct: 250 AKPAPAKPAPSEATQAAQPPAKPAAAKPAAAKPAPAKPAATQATQATKPAAPAKPAA 306
>gb|AAH57590.1| 3110043L15Rik protein [Mus musculus]
Length = 596
Score = 44.3 bits (103), Expect = 0.001
Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = -3
Query: 532 PHPAPPAGSSTCSGSPCGS-----WPGSPRCGPVAP*ACRSSQTPRPPAPASPSARPRSR 368
P P+PPA C+ PC S P SP C P ++P PP+ SPS + RS
Sbjct: 348 PSPSPPARPPPCA--PCPSPQQRRSPASPSCPSPVP----QRRSPVPPSCQSPSPQRRS- 400
Query: 367 *ATPAW*TTRAECPRSQCPRPRPVPGQTTQVEGRWRQTQHPSAAAALRMR 218
CP Q PRP P PG+ T E + + A A + R
Sbjct: 401 -------PVPPSCPAPQ-PRPPPPPGERTLAERVYAKPPSHHAKAGFQGR 442
>dbj|BAA82454.1| ORF1 [TT virus]
Length = 761
Score = 44.3 bits (103), Expect = 0.001
Identities = 24/48 (50%), Positives = 24/48 (50%)
Frame = +2
Query: 383 RRRRSWRRRTRRLRRATRSRRYWPAARRTGPRTARRSRTSTATGRRSW 526
RR R WRRR RRL R R RR PR RR RT T RR W
Sbjct: 14 RRWRRWRRRRRRLPRRRTRRAVRGLGRRRKPRVRRRRRTRRRTYRRGW 61
