Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001776A_C01 KCC001776A_c01
(527 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP79156.1| ribosomal protein rpL17 [Bigelowiella natans] 146 1e-34
pir||T01744 ribosomal protein L17, chloroplast - common tobacco ... 134 9e-31
sp|O24711|RL17_SYNP6 50S ribosomal protein L17 gi|2446914|dbj|BA... 132 3e-30
ref|NP_680897.1| 50S ribosomal protein L17 [Thermosynechococcus ... 132 4e-30
ref|NP_190989.1| ribosomal protein L17 -related protein [Arabido... 129 2e-29
>gb|AAP79156.1| ribosomal protein rpL17 [Bigelowiella natans]
Length = 193
Score = 146 bits (369), Expect = 1e-34
Identities = 74/107 (69%), Positives = 84/107 (78%)
Frame = +2
Query: 206 MRHGNRVKHLGRPADQRKALIRSLVTEVIRHGAIRTTKVKAMVIRKYVDHMITLAKDGSL 385
MRH + K LGRP DQRKALIR LVTEV+RHG I TT V+A IR+YVD MI LAK G L
Sbjct: 77 MRHKSGFKRLGRPQDQRKALIRGLVTEVLRHGRITTTTVRAKAIRRYVDKMIGLAKRGDL 136
Query: 386 HARRQAMAFLYDKDLVGNLFENAPERYAERPGGYTRVKTEPVLSRGD 526
HARRQA AF+YDK+LV NLF AP+RY++RPGGYTRVK E + RGD
Sbjct: 137 HARRQAYAFIYDKELVKNLFIEAPKRYSDRPGGYTRVKKELLPRRGD 183
>pir||T01744 ribosomal protein L17, chloroplast - common tobacco
gi|3298443|dbj|BAA31512.1| chloroplast ribosomal protein
L17 [Nicotiana tabacum]
Length = 205
Score = 134 bits (336), Expect = 9e-31
Identities = 69/137 (50%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
Frame = +2
Query: 119 PVAPRSAQTSSFLGEATLVAPSSGMKWTMMRHGNRVKHLGRPADQRKALIRSLVTEVIRH 298
P+ S+Q S+ + V + G + M RHG +V L RP DQR+AL+R L T++++H
Sbjct: 62 PLLSLSSQDSTSFEHSFTVIDNGGRVFAM-RHGRKVPKLNRPPDQRRALLRGLTTQLLKH 120
Query: 299 GAIRTTKVKAMVIRKYVDHMITLAKDGSLHARRQAMAFLYDKDLVGNLFENAPERYAERP 478
G I+TTK +A +RKYVD MIT+AKDGSLH RRQA+ F+Y+K +V LF P+RY ER
Sbjct: 121 GRIKTTKARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGERN 180
Query: 479 GGYTR-VKTEPVLSRGD 526
GGYTR ++T P RGD
Sbjct: 181 GGYTRIIRTLP--RRGD 195
>sp|O24711|RL17_SYNP6 50S ribosomal protein L17 gi|2446914|dbj|BAA22473.1| 50S ribosomal
protein L17 [Synechococcus sp.]
Length = 116
Score = 132 bits (332), Expect = 3e-30
Identities = 67/107 (62%), Positives = 80/107 (74%)
Frame = +2
Query: 206 MRHGNRVKHLGRPADQRKALIRSLVTEVIRHGAIRTTKVKAMVIRKYVDHMITLAKDGSL 385
MRH V LGRPADQRKAL+RSL TE+IR+G + TTK +A +R V+ M+TLAKDGSL
Sbjct: 1 MRHRCNVPQLGRPADQRKALLRSLTTEIIRNGTVTTTKARAKAVRSEVERMVTLAKDGSL 60
Query: 386 HARRQAMAFLYDKDLVGNLFENAPERYAERPGGYTRVKTEPVLSRGD 526
ARRQA+ ++YDK LV LFE APERYA+R GGYTR+ V RGD
Sbjct: 61 AARRQALGYIYDKQLVHLLFEQAPERYAKRQGGYTRI-LRTVRRRGD 106
>ref|NP_680897.1| 50S ribosomal protein L17 [Thermosynechococcus elongatus BP-1]
gi|22293827|dbj|BAC07659.1| 50S ribosomal protein L17
[Thermosynechococcus elongatus BP-1]
Length = 116
Score = 132 bits (331), Expect = 4e-30
Identities = 67/107 (62%), Positives = 79/107 (73%)
Frame = +2
Query: 206 MRHGNRVKHLGRPADQRKALIRSLVTEVIRHGAIRTTKVKAMVIRKYVDHMITLAKDGSL 385
MRH RV LGRPADQRKAL+R+L TE+IRHG I TTK +A +R + MITLAKDGSL
Sbjct: 1 MRHQRRVPQLGRPADQRKALLRALTTELIRHGRITTTKARAKAVRAEAERMITLAKDGSL 60
Query: 386 HARRQAMAFLYDKDLVGNLFENAPERYAERPGGYTRVKTEPVLSRGD 526
ARR+A+ +LYDK LV +LF APERY +R GGYTR+ V RGD
Sbjct: 61 AARRRALGYLYDKQLVHSLFAQAPERYGDRQGGYTRI-IRSVRRRGD 106
>ref|NP_190989.1| ribosomal protein L17 -related protein [Arabidopsis thaliana]
gi|11276791|pir||T47580 ribosomal protein L17-like
protein - Arabidopsis thaliana
gi|6822067|emb|CAB70995.1| ribosomal protein L17-like
protein [Arabidopsis thaliana]
gi|14030669|gb|AAK53009.1|AF375425_1
AT3g54210/F24B22_170 [Arabidopsis thaliana]
gi|21700779|gb|AAM70513.1| AT3g54210/F24B22_170
[Arabidopsis thaliana] gi|22530904|gb|AAM96956.1|
ribosomal protein L17-like protein [Arabidopsis
thaliana] gi|23198410|gb|AAN15732.1| ribosomal protein
L17-like protein [Arabidopsis thaliana]
Length = 211
Score = 129 bits (325), Expect = 2e-29
Identities = 63/108 (58%), Positives = 81/108 (74%), Gaps = 1/108 (0%)
Frame = +2
Query: 206 MRHGNRVKHLGRPADQRKALIRSLVTEVIRHGAIRTTKVKAMVIRKYVDHMITLAKDGSL 385
MRHG RV L RP DQRKAL+R L T++++HG I+TT+ +A +RK+VD MITLAKDGSL
Sbjct: 96 MRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSL 155
Query: 386 HARRQAMAFLYDKDLVGNLFENAPERYAERPGGYTR-VKTEPVLSRGD 526
H RRQA+ ++Y+K +V LF P+RY ER GGYTR ++T P RGD
Sbjct: 156 HKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLP--RRGD 201
