>KCC001775A_C01 KCC001775A_c01
ccctcaccacaTTATTCACGACTATTATACTTGAGGCTCGAGTTCGGCTGCTGCGGGCGT
GTTTTCCGTTGGCTGGACATCTGGAGGCGCCGCATTTCAGTTCCTGCTGCATTCTCGAAC
CCACTGCAGGCCGCAGCGTTTCGCAGCTCCAAACACAACATGCTGTCGACGAAGCCTTCT
ATCGCCAGGACCAGCGTGATGGCCCGGAGCCCAGCGCCTGTTCGCCTGGTGGCGGGCTCG
CGAGTCACCTGCAGCGCCGCCTCCACACCCACTGCCTGGGACAGCTGGTCGTCCTATATC
TCCAAGCACCGGGCCGACTCGGCTTCAGCACCCGTGACCAAGGCTGAAAAGGATTACGGC
CGTGACATTGCGGCGGCCATCAAGTCTACCGCTGGTGCTTTTAAGCCGAAGTACACCTCA
AGCTCGGCTGGCAGCGGTGGCAGCGGCCACTCCGGAATCGCGGACTTCAAGCTGAGCCAC
GTGGGCAACGTGAACCTGGCCGAGCTGCGCGACCTGCATGAGCGCCTGGAGGCCATCGCC
TGCGTGCAGCTCAAGCAGGCACTGGGCAAGCCTGAGTCTGCGGAGCTGGACGCCGCCTCC
ATCTCCTTCACCACCACCGACGTGGACGCGGCGCTGTGCGTGTCGGGTGTCACGCTGCAG
CAGGGTCTGGATAAGACGGCGCTGATTGCGTTCGTGGCCACCGAGACCGAGCGCCAGGCC
TCCTGGTCGCGGCTGGAGGGCCTCATCCTGCACTGGGGCGCGACCGACTCCGCGGGCGGC
GCCTGGGGACTGCCGCCGCAGGGCTGGGCCGCCTCGCCCAACAAGGTCACTGACGCGGGC
GGTGCCTGGCAGTGCGGCTTTGAGAAGCAGAATGTCAGCGGTCCTGAGGGGAACGCCGCA
GTCTACGTGCTGCTGCTGCA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001775A_C01 KCC001775A_c01
         (920 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB47431.1| KIAA1802 protein [Homo sapiens]                        52  1e-05
ref|XP_290599.1| similar to KIAA1802 protein [Homo sapiens]            52  1e-05
dbj|BAC11273.1| unnamed protein product [Homo sapiens]                 52  1e-05
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ...    51  2e-05
ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ...    50  4e-05

>dbj|BAB47431.1| KIAA1802 protein [Homo sapiens]
          Length = 821

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 61/212 (28%), Positives = 87/212 (40%), Gaps = 25/212 (11%)
 Frame = +2

Query: 254 APPPHPLPGTAGRPISPSTGPTRLQHP*PRLKRITAVTLRRPSSLPLVLLSRSTPQARLA 433
           AP P P P     P+SP +    L +P P+ +     TL  PS+        S+P++ + 
Sbjct: 209 APVPSPEPQKPA-PVSPESVKATLSNPKPQKQSHFPETLGPPSA--------SSPESPVL 259

Query: 434 AVA--------AATPESRTSS*ATWAT*TWPSCATCMSAWRPSPACSSS--RHWASLSLR 583
           A +        AA+PESR S+  T      PS +     W+P PA S    R   ++S  
Sbjct: 260 AASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPG 319

Query: 584 SWTPPPSPSPPPTWTRRCACRVSRCSRVWIRRR*LRS-----WPPRPSARP--------- 721
           SW P P  SP P W        S  S  W   +   S     W P PS  P         
Sbjct: 320 SWKPGPPGSPRP-W----KSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSV 374

Query: 722 PGRGWRASSCT-GARPTPRAAPGDCRRRAGPP 814
               W++SS +  +  +P A+P     ++GPP
Sbjct: 375 SSASWKSSSVSPSSWKSPPASPESW--KSGPP 404

>ref|XP_290599.1| similar to KIAA1802 protein [Homo sapiens]
          Length = 812

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 61/212 (28%), Positives = 87/212 (40%), Gaps = 25/212 (11%)
 Frame = +2

Query: 254 APPPHPLPGTAGRPISPSTGPTRLQHP*PRLKRITAVTLRRPSSLPLVLLSRSTPQARLA 433
           AP P P P     P+SP +    L +P P+ +     TL  PS+        S+P++ + 
Sbjct: 200 APVPSPEPQKPA-PVSPESVKATLSNPKPQKQSHFPETLGPPSA--------SSPESPVL 250

Query: 434 AVA--------AATPESRTSS*ATWAT*TWPSCATCMSAWRPSPACSSS--RHWASLSLR 583
           A +        AA+PESR S+  T      PS +     W+P PA S    R   ++S  
Sbjct: 251 AASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPG 310

Query: 584 SWTPPPSPSPPPTWTRRCACRVSRCSRVWIRRR*LRS-----WPPRPSARP--------- 721
           SW P P  SP P W        S  S  W   +   S     W P PS  P         
Sbjct: 311 SWKPGPPGSPRP-W----KSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSV 365

Query: 722 PGRGWRASSCT-GARPTPRAAPGDCRRRAGPP 814
               W++SS +  +  +P A+P     ++GPP
Sbjct: 366 SSASWKSSSVSPSSWKSPPASPESW--KSGPP 395

>dbj|BAC11273.1| unnamed protein product [Homo sapiens]
          Length = 740

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 61/212 (28%), Positives = 87/212 (40%), Gaps = 25/212 (11%)
 Frame = +2

Query: 254 APPPHPLPGTAGRPISPSTGPTRLQHP*PRLKRITAVTLRRPSSLPLVLLSRSTPQARLA 433
           AP P P P     P+SP +    L +P P+ +     TL  PS+        S+P++ + 
Sbjct: 128 APVPSPEPQKPA-PVSPESVKATLSNPKPQKQSHFPETLGPPSA--------SSPESPVL 178

Query: 434 AVA--------AATPESRTSS*ATWAT*TWPSCATCMSAWRPSPACSSS--RHWASLSLR 583
           A +        AA+PESR S+  T      PS +     W+P PA S    R   ++S  
Sbjct: 179 AASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPG 238

Query: 584 SWTPPPSPSPPPTWTRRCACRVSRCSRVWIRRR*LRS-----WPPRPSARP--------- 721
           SW P P  SP P W        S  S  W   +   S     W P PS  P         
Sbjct: 239 SWKPGPPGSPRP-W----KSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSV 293

Query: 722 PGRGWRASSCT-GARPTPRAAPGDCRRRAGPP 814
               W++SS +  +  +P A+P     ++GPP
Sbjct: 294 SSASWKSSSVSPSSWKSPPASPESW--KSGPP 323

>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
           [Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
           elegans RSR-1 protein (corresponding sequence F28D9.1)
           [Caenorhabditis elegans]
          Length = 601

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 70/247 (28%), Positives = 98/247 (39%), Gaps = 16/247 (6%)
 Frame = -2

Query: 919 AAAARRLRRSPQDR*HSASQSRTARHRPRQ*PCWARRPSPAAAVPRRR-----PRSRSRP 755
           + AAR    SP+ R   ++       R R+ P  ++ P+P  A  R +      R R  P
Sbjct: 292 SVAARAKSGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSP 351

Query: 754 SAG*GPPAATRRPGARSRWP--RTQSAPSYPDPAAA*HPTRTAPRPRRWW*RRWRRRPAP 581
           SA   PP A +R  +RS+ P  R + +PS          +++ P PRR       R PAP
Sbjct: 352 SASKSPPPAPKRAKSRSKSPPARRRRSPS---------ASKSPPAPRRRRSPSKSRSPAP 402

Query: 580 QTQACPVPA*AARRRWPPGAHAGRAARPGSRCPRGSA*SPRFRSGRCHRCQPSLRCTSA* 401
           + +  P     ARRR  P A     A   ++    S  +PR       R  PS   + A 
Sbjct: 403 KREIPP-----ARRRRSPSASKSPPAPKRAKSRSKSPPAPR------RRRSPSQSKSPAP 451

Query: 400 KHQR*T*WPPQCHGRNPFQPWSRVLKPSR---PGAWRYRTTSCPRQWVWRRR------CR 248
           + +R     PQ   R      S+   P R   P A   R  S  R+   RRR       R
Sbjct: 452 RRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSR 511

Query: 247 *LASPPP 227
             + PPP
Sbjct: 512 SRSPPPP 518

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 31/78 (39%), Positives = 33/78 (41%)
 Frame = -2

Query: 910 ARRLRRSPQDR*HSASQSRTARHRPRQ*PCWARRPSPAAAVPRRRPRSRSRPSAG*GPPA 731
           A R RRSP     S S+SR+ R R        RR SP      RR RS S  S    PP 
Sbjct: 463 APRRRRSP-----SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPP 517

Query: 730 ATRRPGARSRWPRTQSAP 677
             RRP    R    Q AP
Sbjct: 518 PPRRP----RQDSEQQAP 531

 Score = 34.3 bits (77), Expect = 3.0
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
 Frame = +2

Query: 533 PSPACSSSRHWASLSLRSWTPPPSPSPPPTWTRRCACRVSRCSRVWIRRR*LRSWPPRPS 712
           P  A S S+   + + R  +P  S SPPP   R  +   S  +R   RRR      P  S
Sbjct: 331 PKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPAR---RRR-----SPSAS 382

Query: 713 ARPPGRGWRASSCTGARPTPRAAPGDCRRR------AGPPRPTRSLTRAVPGSAALRSR 871
             PP    R S      P P+      RRR        PP P R+ +R+    A  R R
Sbjct: 383 KSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRR 441

>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
           [Azotobacter vinelandii]
          Length = 1336

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 50/141 (35%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
 Frame = -2

Query: 856 RTARHRPRQ*PCWARRPSPAAAVPRRRPRSRSRP-SAG*GPPAATRRPGARSRWPRTQSA 680
           R  R+RPR       RP+P   VP RRP +R+R  S    PP A R PGA   W RT  +
Sbjct: 165 RRQRYRPRGSGGSPHRPAP---VPARRPPARARTGSRSPSPPPAGRSPGA---WRRTARS 218

Query: 679 PSYPDPAAA*HPTR--TAPRPRRWW*RRWRRRPAPQTQACPVPA*AARRRWPPGAHAGRA 506
              P P  A    R  +A  P        R RP+      P P        PPG  A   
Sbjct: 219 SPPPRPCRASVGLRCPSAAGPD-------RARPSDSPPPLPGPVARTPASAPPGPPATTR 271

Query: 505 ARPGSRCPRGSA*SPRFRSGR 443
             P  R P+ +A S R R+GR
Sbjct: 272 RPPAGRAPKATAASWR-RTGR 291

EST assemble image

clone accession position 1 LC051f02_r AV622586 1 501 2 MX007b07_r BP086354 12 499 3 MXL014h03_r BP093862 16 431 4 MX048e03_r BP087978 17 163 5 HC009b08_r AV632512 97 647 6 CM097c06_r AV393191 106 573 7 CM100c12_r AV392820 191 702 8 LC038a03_r AV621575 441 926

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