KCC001756A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001756A_C01 KCC001756A_c01
atagatactagtgtaagtagcataacgctgtaatcaaggccccagcggggcagtggactt
tccttcttacgcctgacgctGCTCCTTTCCGGCCCGAAATGAGCGCACAAAAGTCAGCAG
GCGTCAAGGAGGTGCTTCCAAAAGCCGGCCTCGTCGTTAGCGAGAAGGGCAACCTGACCG
AAATTCTGTGCAAGCCCAAGCTCATGCCGCTCAAGTCAATTACTCTGCAAAAGCTAGAGG
AGATGGAAGCCAAGATTTCTGAGGTTACAAAACAGCAGCAGGCAGCACGCCTGGGCACAG
CTGCTGGACCTCGGCCGGGCACTGCGACCAACAACGGCGGCTTTACTGCCTTCTAGATAA
TTAGTTCTAGTCGCTTCTCTAGCAGACTTGGCGCCTGTGCTGGTCCACGCCAGCAGCCGA
TAGCCGAAGGGCCCTGGGCGGCGCAACTTACGTCGAGCGGTCGCAGCCATGGGGAAAGGC
GAACGCCCGGAGCATATGGCTCCGCCCGACATCTTCTACAACGAGGACGAGGCGCGCAAA
TACACAACAAACAGCCGCATGATCAAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001756A_C01 KCC001756A_c01
         (567 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_649762.1| CG10903-PA [Drosophila melanogaster] gi|7298980...    51  1e-05
ref|XP_307631.1| ENSANGP00000016347 [Anopheles gambiae] gi|21291...    50  2e-05
ref|XP_310259.1| ENSANGP00000015849 [Anopheles gambiae] gi|21293...    50  2e-05
emb|CAA11944.1| methyltransferase [Homo sapiens]                       49  4e-05
ref|NP_059998.2| Williams Beuren syndrome chromosome region 22 p...    49  4e-05

>ref|NP_649762.1| CG10903-PA [Drosophila melanogaster] gi|7298980|gb|AAF54183.1|
           CG10903-PA [Drosophila melanogaster]
           gi|17945482|gb|AAL48794.1| RE22146p [Drosophila
           melanogaster]
          Length = 276

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 20/27 (74%), Positives = 26/27 (96%)
 Frame = +1

Query: 484 RPEHMAPPDIFYNEDEARKYTTNSRMI 564
           RPEH APP+IFYN+DEA+KY+TN+R+I
Sbjct: 4   RPEHSAPPEIFYNDDEAKKYSTNTRII 30

>ref|XP_307631.1| ENSANGP00000016347 [Anopheles gambiae] gi|21291290|gb|EAA03435.1|
           ENSANGP00000016347 [Anopheles gambiae str. PEST]
          Length = 294

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = +1

Query: 484 RPEHMAPPDIFYNEDEARKYTTNSRMIN 567
           RPEH+APP+IFYNE EA+KYT N+R+I+
Sbjct: 20  RPEHVAPPEIFYNESEAQKYTNNTRIID 47

>ref|XP_310259.1| ENSANGP00000015849 [Anopheles gambiae] gi|21293836|gb|EAA05981.1|
           ENSANGP00000015849 [Anopheles gambiae str. PEST]
          Length = 294

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = +1

Query: 484 RPEHMAPPDIFYNEDEARKYTTNSRMIN 567
           RPEH+APP+IFYNE EA+KYT N+R+I+
Sbjct: 20  RPEHVAPPEIFYNESEAQKYTNNTRIID 47

>emb|CAA11944.1| methyltransferase [Homo sapiens]
          Length = 220

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +1

Query: 475 KGERPEHMAPPDIFYNEDEARKYTTNSRMIN 567
           +G RPEH  PP++FY+E EARKY  NSRMI+
Sbjct: 4   RGRRPEHGGPPELFYDETEARKYVRNSRMID 34

>ref|NP_059998.2| Williams Beuren syndrome chromosome region 22 protein;
           Williams-Beuren candidate region putative
           methyltransferase [Homo sapiens]
           gi|23831505|sp|O43709|WS22_HUMAN Putative
           methyltransferase HUSSY-03 (Williams-Beuren syndrome
           chromosome region 22 protein) (PP3381)
           gi|16226067|gb|AAL16066.1|AF420248_1 putative
           methyltransferase WBMT [Homo sapiens]
           gi|21552766|gb|AAM62316.1|AF412034_1 Williams-Beuren
           syndrome critical region protein 22 [Homo sapiens]
          Length = 281

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +1

Query: 475 KGERPEHMAPPDIFYNEDEARKYTTNSRMIN 567
           +G RPEH  PP++FY+E EARKY  NSRMI+
Sbjct: 4   RGRRPEHGGPPELFYDETEARKYVRNSRMID 34



EST assemble image


clone accession position
1 HC043g10_r AV635245 1 524
2 CM092f07_r AV392694 158 567




Chlamydomonas reinhardtii
Kazusa DNA Research Institute