KCC001751A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001751A_C01 KCC001751A_c01
aacaaCCCACGAGCCCAGCCAGGACCACTCAAAGAAGGACTACAAGCAGCCATGTCGTTC
GCGTGCAAGCAGCACACCGTCGCCCTGCGCCCGGCGCGGGCCGCTGTTGTTGTGCCTTGC
CCCCGCCACGTCACGGCTCGATTCGGTCAAAGCTCAAGCGAGTTTGAGCCCAAGTGTAAC
GACGTGCCTCTGGCGACCGAGATGGACGATGCCCAGAACGCTCGTCTGGAGGCTATGGCC
AAGGAGGCCTACCGCCGCGCCCAAGACGTCCTCAAAGGCAACAGCCAAAACTTCGCGCAG
GCCCAGCCCACCACGCTCCAGTCGCTGTACGACCTGGCTCGCACCAGCCTGACCTCCGTC
GACAGCGCCTCCCCCAGCCCCGCCTACGAGCTGCTGCTGGCGGCCGAGGGCGAGGCGGCG
GACAAGAGCGCAGCCTCCGGCGCCGACGCCGACGCACCGTCCGCCGCCCCATGCGGCCGC
TTCGGCCCCCGCGTGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001751A_C01 KCC001751A_c01
         (496 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE03119.1| OSJNBa0067K08.27 [Oryza sativa (japonica cultiva...    57  1e-07
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]         57  1e-07
dbj|BAC87637.1| unnamed protein product [Homo sapiens]                 54  1e-06
ref|ZP_00004621.1| COG0449: Glucosamine 6-phosphate synthetase, ...    53  2e-06
ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|2838049...    52  4e-06

>emb|CAE03119.1| OSJNBa0067K08.27 [Oryza sativa (japonica cultivar-group)]
          Length = 508

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 49/149 (32%), Positives = 65/149 (42%), Gaps = 7/149 (4%)
 Frame = +2

Query: 68  SSTPSPCARRG-PLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWRLWPR 244
           SS+P+P A    P     +  T    +  A+A+  P+  +       + PRT      PR
Sbjct: 41  SSSPAPAASSATPAARAPSQRTPPTPATPAKAASPPATNSS------SSPRTPAAPA-PR 93

Query: 245 RPTAAPKTSSKATAKTS----RRPSPPRSSRCTTWLAPA*PPSTAPPPA--PPTSCCWRP 406
            P   P TS   T  +S    + PSPP  S  TT  +P  P  ++PPPA  P T     P
Sbjct: 94  PPQPPPATSPAPTKPSSPPAPKPPSPPAPSPSTTPSSPPAPKPSSPPPAATPTTKPSPPP 153

Query: 407 RARRRTRAQPPAPTPTHRPPPHAAASAPA 493
            +    R  PP P  T  PPP AAA  P+
Sbjct: 154 SSPPAPRPSPPLPPRTPPPPPPAAAPKPS 182

 Score = 40.0 bits (92), Expect = 0.016
 Identities = 28/81 (34%), Positives = 37/81 (45%)
 Frame = +2

Query: 251 TAAPKTSSKATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARRRTRA 430
           ++ P +SS A A +S  P+    S+ T    PA P   A PPA  T+    PR       
Sbjct: 36  SSQPPSSSPAPAASSATPAARAPSQRTP-PTPATPAKAASPPA--TNSSSSPRTPAAPAP 92

Query: 431 QPPAPTPTHRPPPHAAASAPA 493
           +PP P P   P P   +S PA
Sbjct: 93  RPPQPPPATSPAPTKPSSPPA 113

 Score = 38.9 bits (89), Expect = 0.035
 Identities = 24/82 (29%), Positives = 34/82 (41%)
 Frame = +2

Query: 248 PTAAPKTSSKATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARRRTR 427
           P+++P  ++ +    +R PS        T    A PP+T    +P T     PR  +   
Sbjct: 40  PSSSPAPAASSATPAARAPSQRTPPTPATPAKAASPPATNSSSSPRTPAAPAPRPPQPPP 99

Query: 428 AQPPAPTPTHRPPPHAAASAPA 493
           A  PAPT    PP     S PA
Sbjct: 100 ATSPAPTKPSSPPAPKPPSPPA 121

 Score = 36.2 bits (82), Expect = 0.23
 Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 1/145 (0%)
 Frame = +2

Query: 62  RASSTPSPCARRGPLLLCLAPAT-SRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWRLW 238
           R  + P+P   + P     AP   S   + K  +  +PS +T    P    P +      
Sbjct: 85  RTPAAPAPRPPQPPPATSPAPTKPSSPPAPKPPSPPAPSPSTTPSSPPAPKPSSP----- 139

Query: 239 PRRPTAAPKTSSKATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARR 418
           P   T   K S   ++  + RPSPP   R      P  PP+ AP P+P       P    
Sbjct: 140 PPAATPTTKPSPPPSSPPAPRPSPPLPPR----TPPPPPPAAAPKPSPSPPPA--PTNST 193

Query: 419 RTRAQPPAPTPTHRPPPHAAASAPA 493
              + P   TP    P   A S P+
Sbjct: 194 TNSSSPSTSTPVQLSPNFYAQSCPS 218

>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
          Length = 250

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 3/150 (2%)
 Frame = +2

Query: 50  PCRSRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVW 229
           P  S   + P+    R P     A   SR    +     SP+ T     PR T PR    
Sbjct: 86  PTASPTRTPPTESPARTPPTASPARTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPR 145

Query: 230 RLWPRR-PTAAPKTSS--KATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCW 400
           R  PR  PT AP  +S  +   + S   +PPR+S   T      PP+ +P   PPT+   
Sbjct: 146 RTPPRASPTRAPPRASPKRTPPRASPTRTPPRASPTRT------PPTESPARTPPTASPA 199

Query: 401 RPRARRRTRAQPPAPTPTHRPPPHAAASAP 490
           R  +R   R  PP  +PT  PP  +    P
Sbjct: 200 RTPSRASPRRMPPRASPTRTPPRASPTRTP 229

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 39/148 (26%), Positives = 54/148 (36%)
 Frame = +2

Query: 50  PCRSRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVW 229
           P  S   + P    RR P               +   + SP+ T     PR T PR    
Sbjct: 68  PRASPRRAPPRASPRRTPPTASPTRTPPTESPARTPPTASPARTPSRASPRRTPPRASPT 127

Query: 230 RLWPRRPTAAPKTSSKATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPR 409
           R  PR   A+P+   +   + S R +PPR+S          PP  +P   PP +   R  
Sbjct: 128 RTPPR---ASPR---RTPPRASPRRTPPRASPTRA------PPRASPKRTPPRASPTRTP 175

Query: 410 ARRRTRAQPPAPTPTHRPPPHAAASAPA 493
            R      PP  +P   PP  + A  P+
Sbjct: 176 PRASPTRTPPTESPARTPPTASPARTPS 203

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
 Frame = +2

Query: 248 PTAAPKTSSKATAKTSRRPS--PPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARRR 421
           P   P T+S A       P+  PPR+S   T      PP  +P   PP +   R   R  
Sbjct: 27  PARTPPTASPARTPPRASPARTPPRASPGRT------PPRASPRRTPPRASPRRAPPRAS 80

Query: 422 TRAQPPAPTPTHRPPPHAAASAP 490
            R  PP  +PT  PP  + A  P
Sbjct: 81  PRRTPPTASPTRTPPTESPARTP 103

 Score = 39.7 bits (91), Expect = 0.021
 Identities = 41/142 (28%), Positives = 52/142 (35%), Gaps = 12/142 (8%)
 Frame = +2

Query: 5   THEPSQDHSKKDYKQ--PCRSRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSV 178
           T  P++  S+   ++  P  S   + P    RR P          R    +A    SP  
Sbjct: 105 TASPARTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPRRTPPRASPTRAPPRASPKR 164

Query: 179 TTCLWRPRWTMPRTLVWRLWPRR-PTAAPKTSSKAT--AKTSRRPSPPRSS-------RC 328
           T     P  T PR    R  P   P   P T+S A   ++ S R  PPR+S         
Sbjct: 165 TPPRASPTRTPPRASPTRTPPTESPARTPPTASPARTPSRASPRRMPPRASPTRTPPRAS 224

Query: 329 TTWLAPA*PPSTAPPPAPPTSC 394
            T   P   P   PP A PTSC
Sbjct: 225 PTRTPPRASPKRTPPTASPTSC 246

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 20/67 (29%), Positives = 27/67 (39%)
 Frame = +2

Query: 290 TSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARRRTRAQPPAPTPTHRPPP 469
           TS   +PP +S   T      PP+ +P   PPT+   R   R      PP  +P   PP 
Sbjct: 7   TSLTRTPPTASPART------PPTESPARTPPTASPARTPPRASPARTPPRASPGRTPPR 60

Query: 470 HAAASAP 490
            +    P
Sbjct: 61  ASPRRTP 67

>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 52/152 (34%), Positives = 64/152 (41%), Gaps = 9/152 (5%)
 Frame = +2

Query: 62  RASSTPSP---CARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWR 232
           RAS T +P     RR P          R    +     SP+ T     P+ T PR    R
Sbjct: 123 RASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTPPRASPRR 182

Query: 233 LWPRR-PTAAP-KTSSKATAKT-SRRPSPPRSS--RCTTWLAPA*-PPSTAPPPAPPTSC 394
             PR  PT AP + S K T  T S   +PPR+S  R     +PA  PP  +P   PPT  
Sbjct: 183 TPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTPPTESPARTPPRASPTRTPPTES 242

Query: 395 CWRPRARRRTRAQPPAPTPTHRPPPHAAASAP 490
             R  +R  TR  PP  +PT  PP  +    P
Sbjct: 243 PARTPSRASTRRTPPRASPTRTPPRASPKRTP 274

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 47/156 (30%), Positives = 58/156 (37%), Gaps = 8/156 (5%)
 Frame = +2

Query: 50  PCRSRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVW 229
           P  S A + P+    R P     A    R    +     SP  T     P  T PR    
Sbjct: 95  PTASPARTPPTESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPR 154

Query: 230 RLWPRR-PTAAPKTSS--KATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCW 400
           R  PR  PT  P  +S  +   + S R +PPR+S   T   P   P   PP A PT    
Sbjct: 155 RTPPRASPTRTPPRASPKRTPPRASPRRTPPRAS--PTRAPPRASPKRTPPTASPTRTPP 212

Query: 401 RPRARRRTRAQPPAPTP-----THRPPPHAAASAPA 493
           R    R    + PA TP     T  PP  + A  P+
Sbjct: 213 RASPTRTPPTESPARTPPRASPTRTPPTESPARTPS 248

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
 Frame = +2

Query: 167 SPSVTTCLWRPRWT-MPRTLVWRLWPRRPTAAPKTSSKATAKTSRRPSPPRSSRCTTWLA 343
           +P  T+    P  T + R L      R PT A  T     A  +R  +PPR+S   T   
Sbjct: 3   TPYTTSLTRTPHTTSLTRILYTTSLTRPPTRASPTRMPPRASPTR--TPPRASPRRT--- 57

Query: 344 PA*PPSTAPPPAPPTSCCWRPRARRRTRAQPPAPTPTHRPPPHAAASAP 490
              PP  +P   PP +   RP  R      PP   PT  PP  + A  P
Sbjct: 58  ---PPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTP 103

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 37/125 (29%), Positives = 48/125 (37%), Gaps = 5/125 (4%)
 Frame = +2

Query: 131 SRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWRLWPRR-----PTAAPKTSSKATAKTS 295
           +R    +     SP+ T     PR T PR    R  PR      PT AP T    TA  +
Sbjct: 32  TRASPTRMPPRASPTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPT 91

Query: 296 RRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARRRTRAQPPAPTPTHRPPPHA 475
           R  +PP +S   T      PP+ +P   PPT+   R   R      PP  +P   P   +
Sbjct: 92  R--TPPTASPART------PPTESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTAS 143

Query: 476 AASAP 490
               P
Sbjct: 144 PTRTP 148

>ref|ZP_00004621.1| COG0449: Glucosamine 6-phosphate synthetase, contains
           amidotransferase and phosphosugar isomerase domains
           [Rhodobacter sphaeroides]
          Length = 901

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 50/157 (31%), Positives = 60/157 (37%), Gaps = 12/157 (7%)
 Frame = +3

Query: 57  VRVQAAHRRPAPGAGRCCCA-----------LPPPRHGSIRSKLKRV*AQV*RRASGDRD 203
           +R   A  RP  G+G+C C             P PR    R  L+R            RD
Sbjct: 20  LRRGGASPRPRLGSGQCQCRGRILPDRRRGPCPRPRALGRRGDLRR-----------GRD 68

Query: 204 GRCPERSSGGYGQGGLPP-RPRRPQRQQPKLRAGPAHHAPVAVRPGSHQPDLRRQRLPQP 380
            RC    + G G+GG+P  RPRR  R +     G AH A   +    H P  RR    + 
Sbjct: 69  ARCEHPRATGRGRGGIPETRPRRGARGR-----GHAHRARHGLLRARHVPRARRHSGAER 123

Query: 381 RLRAAAGGRGRGGGQERSLRRRRRRTVRRPMRPLRPP 491
            LR    GR RG        RR     R   RPLR P
Sbjct: 124 GLRTRRHGRIRGRDPRLLPSRRLPHLARGHGRPLRAP 160

 Score = 34.7 bits (78), Expect = 0.66
 Identities = 45/126 (35%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
 Frame = +3

Query: 60  RVQAAHRRP--APGAGRCCCALPPPRHGSIRSKLKRV*AQV*RRASGD--RDGRCPERSS 227
           R+  + R P  A G GR   A P PR G+ R            RA G   RD  C  R  
Sbjct: 139 RLLPSRRLPHLARGHGRPLRA-PAPRRGTGRG-----------RACGQLRRDQECRARRG 186

Query: 228 GGYGQGGLPPRPRR-PQRQQPKLRAGPAHHAPVAVRPGSHQPDLRRQRLPQPRLRAAAGG 404
           G   +GG P   RR P  +  + R G  H   + +R G   PD R +R    RL   AGG
Sbjct: 187 G---EGGPPHLSRRRPCGRAYEHRRGHGH---LQLRWGDEAPD-RDRRPCLHRLGHDAGG 239

Query: 405 RGRGGG 422
            G GGG
Sbjct: 240 AGHGGG 245

>ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|28380492|gb|AAF49349.4|
           CG13731-PA [Drosophila melanogaster]
          Length = 926

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 57/183 (31%), Positives = 71/183 (38%), Gaps = 33/183 (18%)
 Frame = +2

Query: 44  KQPCRSRASSTPSPCARRG-----PLLLCLAPATSRLDSVKAQAS-LSPSVTTCLWRPRW 205
           K P R   +  P P  R       P      P T+ L  V  + +  +P  T    RP  
Sbjct: 407 KPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPT 466

Query: 206 TMPRTLVWRLWPRRPTAAPKTSS-------KATAKTSRRPS----PPRSSRCTTWLAPA* 352
             P T   RL    PT  P T+        + T +T+ RP+     P +   TT+L P  
Sbjct: 467 YPPTTR--RLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPT 524

Query: 353 -------PPSTAPPPAPPTSCCWRPRARRRTRA---------QPPAPTPTHRPPPHAAAS 484
                  PP T PP  PPT+    P   R TRA         +PP P PT  PPP   AS
Sbjct: 525 VRTTRPPPPPTRPPTKPPTTYL-PPVTVRTTRATPPPTRPPTRPPTPPPTRPPPPPTRAS 583

Query: 485 APA 493
            PA
Sbjct: 584 TPA 586

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 47/148 (31%), Positives = 55/148 (36%), Gaps = 3/148 (2%)
 Frame = +2

Query: 59  SRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWRLW 238
           +R  +T  P     P    L P T+RL      +  +P  T    RP  T P        
Sbjct: 244 TRPPTTRPPATYLPPTNKPLPPVTTRLPP-PPPSPRTPPPTRPPTRPPTTRPPA------ 296

Query: 239 PRRPTAAPKTSSKATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPA---PPTSCCWRPR 409
               T  P T+      T+R P PP   R      P   P T  PPA   PPT+    P 
Sbjct: 297 ----TYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPPV 352

Query: 410 ARRRTRAQPPAPTPTHRPPPHAAASAPA 493
             RR     P P PT  PPP   AS PA
Sbjct: 353 TTRR-----PTPPPTRPPPPPTRASTPA 375

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 49/161 (30%), Positives = 62/161 (38%), Gaps = 20/161 (12%)
 Frame = +2

Query: 50  PCRSRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPS--VTTCLWRPRWTMPRTL 223
           P  +R    P P     P      P T+R  +     +  P   VTT    P  T P   
Sbjct: 308 PVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPPVTTRRPTPPPTRPPPP 367

Query: 224 VWRLWPRRPTAAPKTSS-------KATAKTSRRPSPPRSSRCT----TWLAPA*------ 352
             R     PT  P T+        + T +T+ RP+PP +   T    T+L P        
Sbjct: 368 PTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPPPTVRTTRP 427

Query: 353 -PPSTAPPPAPPTSCCWRPRARRRTRAQPPAPTPTHRPPPH 472
            PP T PP  PPT+    P   R TRA PP   P  RPP +
Sbjct: 428 PPPPTRPPTKPPTTYL-PPVTVRTTRATPPPTRPPTRPPTY 467

 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 48/168 (28%), Positives = 58/168 (33%), Gaps = 5/168 (2%)
 Frame = +2

Query: 2   TTHEPSQDHSKKDYKQPCRSRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVT 181
           TT  P++  ++   + P R        P     P    L P T+RL          P   
Sbjct: 182 TTQPPTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPT- 240

Query: 182 TCLWRPRWTMPRTLVWRLWPRRPTAA--PKTSSKATAKTSRRPSPPRSSRCTTWLAPA*P 355
               RP    P T        RP A   P T+      T+R P PP S R      P   
Sbjct: 241 ----RPPTRPPTT--------RPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTR 288

Query: 356 PSTAPPPA---PPTSCCWRPRARRRTRAQPPAPTPTHRPPPHAAASAP 490
           P T  PPA   PPT+   +P     TR  PP P P   PP       P
Sbjct: 289 PPTTRPPATYLPPTN---KPLPPVTTRLPPPPPPPRTPPPTRPPTKPP 333

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 54/181 (29%), Positives = 72/181 (38%), Gaps = 24/181 (13%)
 Frame = +2

Query: 2    TTHEPSQDHSKKDYKQPCR-----SRASSTPSPCARRGPLLLCLAPATSRLDSVKAQAS- 163
            TT  P+   +K   + P       S  ++ P P   R P      P T+ L  V  + + 
Sbjct: 608  TTPRPTLPPTKPPTRPPTTYLPPPSVRTTRPPPPPTRPPT----KPPTTYLPPVTVRTTR 663

Query: 164  LSPSVTTCLWRPRWTMPRTLVWRLWPRRPTAAPKTSS-------KATAKTSRRPS----P 310
             +P  T    RP    P T   RL    PT  P T+        + T +T+ RP+     
Sbjct: 664  ATPPPTRPPTRPPTYPPTTR--RLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTK 721

Query: 311  PRSSRCTTWLAPA*-------PPSTAPPPAPPTSCCWRPRARRRTRAQPPAPTPTHRPPP 469
            P +   TT+L P         PP T PP  PPT+    P   R TRA PP   P  RPP 
Sbjct: 722  PPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYL-PPVTVRTTRATPPPTRPPTRPPT 780

Query: 470  H 472
            +
Sbjct: 781  Y 781

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 47/149 (31%), Positives = 58/149 (38%), Gaps = 8/149 (5%)
 Frame = +2

Query: 44  KQPCRSRASSTPSPCAR--RGPLLLCLAPATSRLDSVKAQASLSP-SVTTCLWRPRWTMP 214
           K P R   +  P P  R  R P      P  +R  +      L P +V T    P  T P
Sbjct: 510 KPPTRPPTTYLPPPTVRTTRPP------PPPTRPPTKPPTTYLPPVTVRTTRATPPPTRP 563

Query: 215 RTLVWRLWPRRPTAAPKTSSKATAKT----SRRPSPPRSSRCTTWLAPA*P-PSTAPPPA 379
            T      P RP   P T +   A T    + +P PP + R T    P    P T PP  
Sbjct: 564 PTRPPTPPPTRPPPPP-TRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTR 622

Query: 380 PPTSCCWRPRARRRTRAQPPAPTPTHRPP 466
           PPT+    P + R TR  PP   P  +PP
Sbjct: 623 PPTTYL-PPPSVRTTRPPPPPTRPPTKPP 650

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 45/151 (29%), Positives = 56/151 (36%), Gaps = 10/151 (6%)
 Frame = +2

Query: 44   KQPCRSRASSTPSPCAR--RGPLLLCLAPATSRLDSVKAQASLSP-SVTTCLWRPRWTMP 214
            K P R   +  P P  R  R P      P  +R  +      L P +V T    P  T P
Sbjct: 721  KPPTRPPTTYLPPPTVRTTRPP------PPPTRPPTKPPTTYLPPVTVRTTRATPPPTRP 774

Query: 215  RTLVWRLWPRRPTAAPKTSSKATAKT------SRRPSPPRSSRCTTWLAPA*P-PSTAPP 373
                    P RP   P T+ + T         + +P PP + R T    P    P T PP
Sbjct: 775  --------PTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTRPP 826

Query: 374  PAPPTSCCWRPRARRRTRAQPPAPTPTHRPP 466
              PPT+    P  R  TR  PP   P  +PP
Sbjct: 827  TKPPTTYLPPPTVRT-TRPPPPPTRPPTKPP 856

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 46/161 (28%), Positives = 57/161 (34%), Gaps = 17/161 (10%)
 Frame = +2

Query: 59  SRASSTPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWRLW 238
           +R  +T  P     P    L P T+RL          P       RP    P T      
Sbjct: 287 TRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPT-----RPPTKPPTT------ 335

Query: 239 PRRPTAA--PKTSSKATAKTSRRPSPPRSSRCTTWLAPA*PPSTAPPPAP----PTSCCW 400
             RP A   P T+      T+RRP+PP +        P  PP+ A  PAP    PT+   
Sbjct: 336 --RPPATYLPPTNKPPPPVTTRRPTPPPTR-------PPPPPTRASTPAPTYLPPTNKPL 386

Query: 401 RPRARRRTRAQPPAPTP-----------THRPPPHAAASAP 490
            P   R T    P PTP           T+ PPP    + P
Sbjct: 387 PPVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPPPTVRTTRP 427

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 49/165 (29%), Positives = 62/165 (36%), Gaps = 29/165 (17%)
 Frame = +2

Query: 41   YKQPCRSRAS-STPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSV---------TTCL 190
            Y  P   R + +TP P   R P      P T+R  +  A   L P+          TT  
Sbjct: 756  YLPPVTVRTTRATPPPT--RPPTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVR 813

Query: 191  WRPRWTMPRTLVWRLWPRRPTAAPKTS--SKATAKTSRRPSPPR---SSRCTTWLAPA*P 355
              PR T+P        P RP   P T+     T +T+R P PP    +   TT+L P   
Sbjct: 814  TTPRPTLP--------PTRPPTKPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTV 865

Query: 356  PSTAPPPAPPT--------------SCCWRPRARRRTRAQPPAPT 448
              T  PP PPT              +    P  +R T   PPAPT
Sbjct: 866  VRTTRPPPPPTRRTTVYVPPPTVRTTVYVPPPTQRTTVYVPPAPT 910

 Score = 40.0 bits (92), Expect = 0.016
 Identities = 57/208 (27%), Positives = 71/208 (33%), Gaps = 58/208 (27%)
 Frame = +2

Query: 41   YKQPCRSRAS-STPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSV---------TTCL 190
            Y  P   R + +TP P   R P      P T+R  +  A   L P+          TT  
Sbjct: 442  YLPPVTVRTTRATPPPT--RPPTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVR 499

Query: 191  WRPRWTMPRTLVWRLWPRRPTAAPKTS--SKATAKTSRRPSPPR---SSRCTTWLAP--- 346
              PR T+P        P +P   P T+     T +T+R P PP    +   TT+L P   
Sbjct: 500  TTPRPTLP--------PTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTV 551

Query: 347  ----A*PPSTAPPPAPPTSCCWRPRARRRTRAQPPAPT---------------------- 448
                A PP T PP  PPT    RP     TRA  PAPT                      
Sbjct: 552  RTTRATPPPTRPPTRPPTPPPTRPPPPP-TRASTPAPTYLPPTNKPLPPVTVRTTVRTTP 610

Query: 449  --------------PTHRPPPHAAASAP 490
                           T+ PPP    + P
Sbjct: 611  RPTLPPTKPPTRPPTTYLPPPSVRTTRP 638

 Score = 39.3 bits (90), Expect = 0.027
 Identities = 56/205 (27%), Positives = 71/205 (34%), Gaps = 55/205 (26%)
 Frame = +2

Query: 41   YKQPCRSRAS-STPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSV---------TTCL 190
            Y  P   R + +TP P   R P      P T+R  +  A   L P+          TT  
Sbjct: 653  YLPPVTVRTTRATPPPT--RPPTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVR 710

Query: 191  WRPRWTMPRTLVWRLWPRRPTAAPKTS--SKATAKTSRRPSPPR---SSRCTTWLAP--- 346
              PR T+P        P +P   P T+     T +T+R P PP    +   TT+L P   
Sbjct: 711  TTPRPTLP--------PTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTV 762

Query: 347  ----A*PPSTAPPPAPPTSCCWRPRARRRTRAQP----------------------PAPT 448
                A PP T PP  PPT   + P  RR T   P                      P PT
Sbjct: 763  RTTRATPPPTRPPTRPPT---YPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPT 819

Query: 449  -----------PTHRPPPHAAASAP 490
                        T+ PPP    + P
Sbjct: 820  LPPTRPPTKPPTTYLPPPTVRTTRP 844

 Score = 38.1 bits (87), Expect = 0.060
 Identities = 48/184 (26%), Positives = 60/184 (32%), Gaps = 45/184 (24%)
 Frame = +2

Query: 74   TPSPCARRGPLLLCLAPATSRLDSVKAQASLSPSVTTCLWRPRWTMPRTLVWRLWPRRPT 253
            TP P     P      PA + L             TT    PR T+P        P +P 
Sbjct: 569  TPPPTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLP--------PTKPP 620

Query: 254  AAPKTS--SKATAKTSRRPSPPR---SSRCTTWLAP-------A*PPSTAPPPAPPTSCC 397
              P T+     + +T+R P PP    +   TT+L P       A PP T PP  PPT   
Sbjct: 621  TRPPTTYLPPPSVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPT--- 677

Query: 398  WRPRARRRTRAQP----------------------PAPT-----------PTHRPPPHAA 478
            + P  RR T   P                      P PT            T+ PPP   
Sbjct: 678  YPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVR 737

Query: 479  ASAP 490
             + P
Sbjct: 738  TTRP 741

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
 Frame = +2

Query: 296 RRPSPPRSSRCTTWLAPA*PPSTAPPPAPPTSCCWRPRARRR----TRAQPPAPTPTHRP 463
           R   PP          P   P T PP  PPT   + P   +     T   PP P P   P
Sbjct: 181 RTTQPPTRPPTRPPTRPPTRPPTRPPTPPPT---YLPPTNKPLPPVTTRLPPPPPPPRTP 237

Query: 464 PPHAAASAP 490
           PP    + P
Sbjct: 238 PPTRPPTRP 246



EST assemble image


clone accession position
1 HC058h01_r AV636387 1 499
2 HC071b04_r AV637284 6 451
3 HC042a09_r AV635115 8 452
4 CM091f07_r AV397555 192 399




Chlamydomonas reinhardtii
Kazusa DNA Research Institute