KCC001744A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001744A_C01 KCC001744A_c01
ctcactccgtgttccccttgatgtatacgcagatggaacttctcggggaaacaagcgcag
cagctagctggcccctgctcGCCGCACCTCCGACTACCTCCGCCGCGGGCGTGCCTGGGA
TGTGCCAGCGGGCCATGCGAAACCCTGCGCCCGCCGAGACGGCTGCCTTGCCGTCTTCTT
TACCTACGCTAGAGTTACTTGGTAAACACACAAATATGGGCATAGGGAACGCTTCTTAAG
CTTGGCCTTTTGACAGTACACATTCAGGCCAGCCCGCTCTCGACCGCACAAGTGCTATGT
TGAAGGCTGCGTTGCCACGAATTATGAACGCTGCTAGCATGTCTTGTGCAGCTACTGGGC
TGCAGCGCTCCGGTCCGCTGGCGATGAACGCTGCGACTACATCGCGAACGGGGCCCGCTT
CAGGGCTTCCGAAACATTCCTGGGGTGCCAGTGCTCGACGAGCATTTGTTGCACCTGCCA
CTATCTCGGAACGGCTGCAGCCGAAGCTCTCGACGAATTACTCGGTGGTTCTGCCGCAAT
ACGAGCCCACGGATCCCTCGGGCATCCCTGAGGTTTTCGGAAACGTGCATTCAACAGAAA
GCATGAGCGCGGTGGACGGCCCTGGCGTACGGTTCCTGGTGTTTGTGCAGGGCTGCGCCA
TGCGCTGCCTGTTCTGCTCCAACCCGGACACGTGGACGCTCAAGGGCGGCAACAAGACCA
GCAGCAAGGAGATCGCGGCGGACATCAAGAGGGTCCGCAACTACCTCAAGCCACGCGGCG
GCATCACCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001744A_C01 KCC001744A_c01
         (789 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_815325.1| pyruvate formate-lyase activating enzyme [Enter...    87  2e-16
ref|NP_347617.1| Pyruvate-formate-lyase-activating enzyme [Clost...    87  4e-16
ref|ZP_00035767.1| COG1180: Pyruvate-formate lyase-activating en...    86  5e-16
ref|NP_670093.1| pyruvate formate lyase activating enzyme 1 [Yer...    85  1e-15
ref|NP_267970.1| pyruvate-formate lyase activating enzyme [Lacto...    84  3e-15

>ref|NP_815325.1| pyruvate formate-lyase activating enzyme [Enterococcus faecalis
           V583] gi|29343634|gb|AAO81395.1| pyruvate formate-lyase
           activating enzyme [Enterococcus faecalis V583]
          Length = 254

 Score = 87.4 bits (215), Expect = 2e-16
 Identities = 39/73 (53%), Positives = 49/73 (66%), Gaps = 1/73 (1%)
 Frame = +3

Query: 573 VFGNVHSTESMSAVDGPGVRFLVFVQGCAMRCLFCSNPDTWTL-KGGNKTSSKEIAADIK 749
           V G +HSTE+   VDGPGVRF+VF QGC MRC FC NPDTW +  GG   ++ E+  +  
Sbjct: 5   VTGRIHSTENFGTVDGPGVRFIVFTQGCRMRCQFCHNPDTWKIGSGGRVVTTDEVLEEAL 64

Query: 750 RVRNYLKPRGGIT 788
           R R+Y   +GGIT
Sbjct: 65  RFRSYWGEKGGIT 77

>ref|NP_347617.1| Pyruvate-formate-lyase-activating enzyme [Clostridium
           acetobutylicum] gi|25285890|pir||B97021
           pyruvate-formate-lyase-activating enzyme [imported] -
           Clostridium acetobutylicum
           gi|15023888|gb|AAK78957.1|AE007614_5
           Pyruvate-formate-lyase-activating enzyme [Clostridium
           acetobutylicum]
          Length = 237

 Score = 86.7 bits (213), Expect = 4e-16
 Identities = 36/71 (50%), Positives = 49/71 (68%), Gaps = 1/71 (1%)
 Frame = +3

Query: 579 GNVHSTESMSAVDGPGVRFLVFVQGCAMRCLFCSNPDTWTLKGGNKTSSKEIAADIKRVR 758
           G +HS E+M  VDGPG+R +VF QGC +RC FC NPDTW +  G + S++E+   +KR +
Sbjct: 2   GKIHSIETMGLVDGPGIRVVVFFQGCRLRCAFCHNPDTWNVNSGEEISAEELMLKVKRYK 61

Query: 759 NYL-KPRGGIT 788
           NY  K  GG+T
Sbjct: 62  NYFDKSGGGVT 72

>ref|ZP_00035767.1| COG1180: Pyruvate-formate lyase-activating enzyme [Enterococcus
           faecium]
          Length = 253

 Score = 86.3 bits (212), Expect = 5e-16
 Identities = 37/73 (50%), Positives = 50/73 (67%)
 Frame = +3

Query: 570 EVFGNVHSTESMSAVDGPGVRFLVFVQGCAMRCLFCSNPDTWTLKGGNKTSSKEIAADIK 749
           +  G VHS E+  +VDGPG+RF+VF+QGC MRC FC NPDTW + GG + ++ E+    +
Sbjct: 4   KTIGYVHSIETFGSVDGPGLRFVVFMQGCRMRCQFCHNPDTWNIGGGKEYTADELLDKAE 63

Query: 750 RVRNYLKPRGGIT 788
           R R Y   +GGIT
Sbjct: 64  RFRPYWGDKGGIT 76

>ref|NP_670093.1| pyruvate formate lyase activating enzyme 1 [Yersinia pestis KIM]
           gi|21959685|gb|AAM86344.1|AE013882_5 pyruvate formate
           lyase activating enzyme 1 [Yersinia pestis KIM]
          Length = 265

 Score = 85.1 bits (209), Expect = 1e-15
 Identities = 38/82 (46%), Positives = 51/82 (61%), Gaps = 4/82 (4%)
 Frame = +3

Query: 549 TDPSGIPE----VFGNVHSTESMSAVDGPGVRFLVFVQGCAMRCLFCSNPDTWTLKGGNK 716
           TDPS + E    V G +HS ES   VDGPG+RF+VF QGC MRCL+C N DTW   GG +
Sbjct: 10  TDPSDLVEDKKPVLGRIHSFESCGTVDGPGIRFIVFFQGCLMRCLYCHNRDTWDTHGGKE 69

Query: 717 TSSKEIAADIKRVRNYLKPRGG 782
            + +E+  +    R+++   GG
Sbjct: 70  VTVEELVKEAVTYRHFMNASGG 91

>ref|NP_267970.1| pyruvate-formate lyase activating enzyme [Lactococcus lactis subsp.
           lactis] gi|25285886|pir||E86851 hypothetical protein
           pflA [imported] - Lactococcus lactis subsp. lactis
           (strain IL1403) gi|12724840|gb|AAK05911.1|AE006411_6
           pyruvate-formate lyase activating enzyme (EC 1.97.1.4)
           [Lactococcus lactis subsp. lactis]
          Length = 264

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
 Frame = +3

Query: 564 IPEVFGNVHSTESMSAVDGPGVRFLVFVQGCAMRCLFCSNPDTWTLKGGNKT--SSKEIA 737
           + +V G +HSTES  +VDGPGVRF++F+QGC MRC +C NPDTW LK    T  + +++ 
Sbjct: 9   LKKVTGLIHSTESFGSVDGPGVRFIIFMQGCRMRCKYCHNPDTWALKSDKATERTVEDVM 68

Query: 738 ADIKRVRNYLKPRGGIT 788
            +  R R +   +GGIT
Sbjct: 69  DEALRFRGFWGEKGGIT 85



EST assemble image


clone accession position
1 LCL002c10_r AV626096 1 332
2 MXL046d02_r BP095718 201 672
3 MX240g01_r BP091541 204 709
4 CM089f04_r AV392273 238 790




Chlamydomonas reinhardtii
Kazusa DNA Research Institute