KCC001741A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001741A_C01 KCC001741A_c01
CTAAAACGTGCCCAGCAATCGCAGAAGTTTGCAGAAGCCCAGCTCGAAACTTATCAACTA
AGTGGAGCTATCTTGGCATTGCTGGCATCACTTGAACTGTCTTCATTCTTCTGTCAAGTG
ACAGCCTTTACGAGCTCTCGAGAGTCTGAGACTTCTGTGCCTGACAGGGCCGCTAACCCG
CCGATCAATACTTTGCTCGCCTAGAAACATATATTAAATGAACGCAGCAGCTCCGGACCC
CTTGAAAGGCCACGGCCGATACGCAAAGGTCCAGCCTCTTAGCTCGGGCTCCTTTGGCTT
CGTGCACCTCTGCAAGAACCTACAAACTGGCGAGCTAGTGGCTATCAAATTCTTGGAACG
CGGGGAGCGGGTAAACAAATATGTGGAGACGGAGGTCCTGAACCACCGCATGCTGCGGCA
CCCGCACGTCATCGAGTTCAAGGAGGTGTTCCTGACGCCAGAATACATCTGCATCTGCAT
GGAGTACGCGTCGGGCGGCAACCTGTTTGGCTACGTGCAGCGCGCGGTGCGGCTCAAGGA
GCCCGCGGCACGCTGGTTCTTCCAGCAGCTCTGCATCGGTCTGGACTACTGCCACCGGCG
CGGCGTGGTGAACCGCGACATCAAACTGGAGAACACTCTCCTGACCATGGTGCCGGGCCT
GCCGCTGCCGCTGCTCAAAATCTGCGACTTCGGGTACAGCAAGGCGCACTTCATGTCCGC
GCCCAAGAGCAAAGTCGGGACGTTGGCTTACATGGCTCCGGAGGTGATTCGCGACACGGG
ACAGTAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001741A_C01 KCC001741A_c01
         (787 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC98509.1| sulfur stress regulator [Chlamydomonas reinhardtii]    238  8e-62
pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2...   191  1e-47
gb|AAA34017.1| protein kinase 2                                       191  1e-47
ref|NP_201170.1| serine/threonine protein kinase, putative [Arab...   189  6e-47
pir||T05223 probable serine/threonine-specific protein kinase (E...   189  6e-47

>gb|AAC98509.1| sulfur stress regulator [Chlamydomonas reinhardtii]
          Length = 357

 Score =  238 bits (607), Expect = 8e-62
 Identities = 115/186 (61%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
 Frame = +2

Query: 224 AAAPDPLKGHGRYAKVQPLSSGSFGFVHLCKNLQTGELVAIKFLERGERVNKYVETEVLN 403
           A  P+PL GH RY K++ L+SG+FGFV L ++  TGE  A+KF+ERG+++ KYVE E++N
Sbjct: 11  AGRPEPLIGHPRYEKIKDLNSGTFGFVQLARDKLTGETWAVKFIERGDKITKYVEREIIN 70

Query: 404 HRMLRHPHVIEFKEVFLTPEYICICMEYASGGNLFGYVQRAVRLKEPAARWFFQQLCIGL 583
           HR L HPH+++F+EVFLTP ++CI ME+A GG++F YV R   L+E  ARWFFQQL +GL
Sbjct: 71  HRCLVHPHIVQFREVFLTPTHLCIVMEFAPGGDMFEYVVRKNGLREDEARWFFQQLIVGL 130

Query: 584 DYCHRRGVVNRDIKLENTLLTMVPGLPLPLLKICDFGYSK-AHFMSAPKSKVGTLAYMAP 760
           DYCHR GVVNRDIKLENTLL      P PL+KICDFGYSK   F SAP S+VGT AY+AP
Sbjct: 131 DYCHRMGVVNRDIKLENTLL---DSSPRPLVKICDFGYSKHEKFQSAPGSRVGTPAYLAP 187

Query: 761 EVIRDT 778
           EVI  T
Sbjct: 188 EVILTT 193

>pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2.7.1.-) -
           soybean gi|169991|gb|AAA33979.1| protein kinase
          Length = 339

 Score =  191 bits (484), Expect = 1e-47
 Identities = 95/172 (55%), Positives = 126/172 (73%), Gaps = 1/172 (0%)
 Frame = +2

Query: 257 RYAKVQPLSSGSFGFVHLCKNLQTGELVAIKFLERGERVNKYVETEVLNHRMLRHPHVIE 436
           RY  ++ L SG+FG   L K+ +TGELVAIK++ERG++++  V+ E++NHR LRHP++I 
Sbjct: 4   RYETLKELGSGNFGVARLAKDKETGELVAIKYIERGKKIDANVQREIVNHRSLRHPNIIR 63

Query: 437 FKEVFLTPEYICICMEYASGGNLFGYVQRAVRLKEPAARWFFQQLCIGLDYCHRRGVVNR 616
           FKEVFLTP ++ I +EYA+GG LF  +  A RL E  AR+FFQQL  G+ YCH   + +R
Sbjct: 64  FKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHR 123

Query: 617 DIKLENTLLTMVPGLPLPLLKICDFGYSKAHFM-SAPKSKVGTLAYMAPEVI 769
           D+KLENTLL    G P P LKICDFG+SK+  + S PKS VGT AY+APEV+
Sbjct: 124 DLKLENTLL---DGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVL 172

>gb|AAA34017.1| protein kinase 2
          Length = 339

 Score =  191 bits (484), Expect = 1e-47
 Identities = 95/172 (55%), Positives = 126/172 (73%), Gaps = 1/172 (0%)
 Frame = +2

Query: 257 RYAKVQPLSSGSFGFVHLCKNLQTGELVAIKFLERGERVNKYVETEVLNHRMLRHPHVIE 436
           RY  ++ L SG+FG   L K+ +TGELVAIK++ERG++++  V+ E++NHR LRHP++I 
Sbjct: 4   RYETLKELGSGNFGVARLAKDKETGELVAIKYIERGKKIDANVQREIVNHRSLRHPNIIR 63

Query: 437 FKEVFLTPEYICICMEYASGGNLFGYVQRAVRLKEPAARWFFQQLCIGLDYCHRRGVVNR 616
           FKEVFLTP ++ I +EYA+GG LF  +  A RL E  AR+FFQQL  G+ YCH   + +R
Sbjct: 64  FKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHR 123

Query: 617 DIKLENTLLTMVPGLPLPLLKICDFGYSKAHFM-SAPKSKVGTLAYMAPEVI 769
           D+KLENTLL    G P P LKICDFG+SK+  + S PKS VGT AY+APEV+
Sbjct: 124 DLKLENTLL---DGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVL 172

>ref|NP_201170.1| serine/threonine protein kinase, putative [Arabidopsis thaliana]
           gi|10177046|dbj|BAB10458.1| serine/threonine-protein
           kinase [Arabidopsis thaliana]
          Length = 360

 Score =  189 bits (479), Expect = 6e-47
 Identities = 94/172 (54%), Positives = 124/172 (71%), Gaps = 1/172 (0%)
 Frame = +2

Query: 257 RYAKVQPLSSGSFGFVHLCKNLQTGELVAIKFLERGERVNKYVETEVLNHRMLRHPHVIE 436
           +Y  V+ L +G+FG   L ++ +T ELVA+K++ERG ++++ V  E++NHR LRHP++I 
Sbjct: 3   KYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIR 62

Query: 437 FKEVFLTPEYICICMEYASGGNLFGYVQRAVRLKEPAARWFFQQLCIGLDYCHRRGVVNR 616
           FKEV LTP ++ I MEYASGG LF  +  A R  E  AR+FFQQL  G+DYCH   + +R
Sbjct: 63  FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHR 122

Query: 617 DIKLENTLLTMVPGLPLPLLKICDFGYSKAHFM-SAPKSKVGTLAYMAPEVI 769
           D+KLENTLL    G P PLLKICDFGYSK+  + S PKS VGT AY+APEV+
Sbjct: 123 DLKLENTLL---DGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVL 171

>pir||T05223 probable serine/threonine-specific protein kinase (EC 2.7.1.-)
           F17I5.140 - Arabidopsis thaliana
           gi|3297819|emb|CAA19877.1| protein kinase-like protein
           [Arabidopsis thaliana] gi|7270344|emb|CAB80112.1|
           protein kinase-like protein [Arabidopsis thaliana]
          Length = 357

 Score =  189 bits (479), Expect = 6e-47
 Identities = 94/172 (54%), Positives = 124/172 (71%), Gaps = 1/172 (0%)
 Frame = +2

Query: 257 RYAKVQPLSSGSFGFVHLCKNLQTGELVAIKFLERGERVNKYVETEVLNHRMLRHPHVIE 436
           RY  V+ + SG+FG   L ++ Q+ ELVA+K++ERGE++++ V+ E++NHR LRHP+++ 
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVR 79

Query: 437 FKEVFLTPEYICICMEYASGGNLFGYVQRAVRLKEPAARWFFQQLCIGLDYCHRRGVVNR 616
           FKEV LTP ++ I MEYASGG LF  +  A R  E  AR+FFQQL  G+ YCH   V +R
Sbjct: 80  FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139

Query: 617 DIKLENTLLTMVPGLPLPLLKICDFGYSKAHFM-SAPKSKVGTLAYMAPEVI 769
           D+KLENTLL    G P P LKICDFGYSK+  + S PKS VGT AY+APEV+
Sbjct: 140 DLKLENTLL---DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188



EST assemble image


clone accession position
1 MX237a06_r BP091329 1 482
2 LCL063g08_r AV629687 64 578
3 MXL042e04_r BP095478 76 534
4 LC043h07_r AV622013 79 614
5 CM088h01_r AV393037 305 896




Chlamydomonas reinhardtii
Kazusa DNA Research Institute