KCC001740A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001740A_C01 KCC001740A_c01
cttgtacttgtgtcaacggcttgacagcagcaaatagtggctttgtcggctgcgcctgaa
tcccgacacaaaatgtccgtTGCTTCTGCTCATCAACATGCTGTGGTCCTTATCCTGGAC
TATGGCTCACAGTACACACAGCTCATTACGCGCCGCGTGCGCGAGCTGAGCATGTTCTCG
GTGCTGTTCCCTGGCGACGCTTCGCTGGACCGCATCAAGGGCGTGAACCCCCGCGTGGTC
ATCCTCTCCGGCGGCCCCAACTCGGTGCACGTTGAGGGCTCCCCCCGCGTACCCGATGGC
TTCTTCGAGTACTGCGCCGAGAAGAACGTGCCCGTGCTGGGTGTGTGCTACGGCATGCAG
ATGATTACCCACCTGCTTGGCGGTGAGGTCAAGCCCGCCGTGCACGGTGGGGAGTATGGC
CGCATGCCCATGGACATCGCTCCCTCGTCCCAGCTGTTTGACTTCCTGAGCAGCAGCACC
GTCAATGTGTGGATGAGCCACGGTGATGAGGCTGTCAAGCTGCCCGCCGGCTTCACTGCC
GTCGCCAAGAGCCACCAGGGCGCCATCGTGGCCATTGAGAACTCGGAGCGCCGCATCTAC
GGCTTCCAGTTCCACCCCGAGGTCATGCACACGGAGCACGGCATGGAGATGATCAAGCAC
TTTCTCATCGGCATCGCCGCGGTGCCCGCTGACTGGAACATGGGCCAAGTGCTGGAGGAG
CAGATGGCCAAGATCAAAGCGCAGGTGGGCCCCGATTGACACGTCATCTGCGCGCTGTCA
GGCGGCGTGGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001740A_C01 KCC001740A_c01
         (792 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO45104.1| GMP synthetase [Chlamydomonas reinhardtii]             484  e-136
gb|AAO42053.1| putative GMP synthase [Arabidopsis thaliana]           246  4e-64
ref|NP_176553.1| GMP synthase [glutamine-hydrolyzing] (glutamine...   246  4e-64
dbj|BAC22314.1| putative GMP synthase [Oryza sativa (japonica cu...   246  4e-64
ref|ZP_00058024.1| COG0519: GMP synthase, PP-ATPase domain/subun...   206  3e-52

>gb|AAO45104.1| GMP synthetase [Chlamydomonas reinhardtii]
          Length = 535

 Score =  484 bits (1245), Expect = e-136
 Identities = 239/240 (99%), Positives = 239/240 (99%)
 Frame = +1

Query: 73  MSVASAHQHAVVLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDRIKGVNPRVVILSG 252
           MSVASAHQHAVVLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDRIKGVNPRVVILSG
Sbjct: 1   MSVASAHQHAVVLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDRIKGVNPRVVILSG 60

Query: 253 GPNSVHVEGSPRVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVKPAVHGGEYGRMPM 432
           GPNSVHVEGSPRVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVKPAVHGGEYGRMPM
Sbjct: 61  GPNSVHVEGSPRVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVKPAVHGGEYGRMPM 120

Query: 433 DIAPSSQLFDFLSSSTVNVWMSHGDEAVKLPAGFTAVAKSHQGAIVAIENSERRIYGFQF 612
           DIAPSSQLFDFLSSSTVNVWMSHGDEAVKLPAGFTAVAKSHQGAIVAIENSERRIYGFQF
Sbjct: 121 DIAPSSQLFDFLSSSTVNVWMSHGDEAVKLPAGFTAVAKSHQGAIVAIENSERRIYGFQF 180

Query: 613 HPEVMHTEHGMEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGPD*HVICALSGGVD 792
           HPEVMHTEHGMEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGPD HVICALSGGVD
Sbjct: 181 HPEVMHTEHGMEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGPDDHVICALSGGVD 240

>gb|AAO42053.1| putative GMP synthase [Arabidopsis thaliana]
          Length = 534

 Score =  246 bits (627), Expect = 4e-64
 Identities = 122/230 (53%), Positives = 157/230 (68%), Gaps = 1/230 (0%)
 Frame = +1

Query: 106 VLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDRIKGVNPRVVILSGGPNSVHVEGSP 285
           VLILDYGSQYT LITRR+R L++FS++  G +SL  I   NPRVVILSGGP+SVH   +P
Sbjct: 11  VLILDYGSQYTHLITRRIRSLNVFSLVISGTSSLKSITSYNPRVVILSGGPHSVHALDAP 70

Query: 286 RVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVKPAVHGGEYGRMPMDIAPSSQLFDF 465
             P+GF E+     V VLG+CYG+Q+I   LGG V       EYG+M +++   S++F  
Sbjct: 71  SFPEGFIEWAESNGVSVLGICYGLQLIVQKLGGVVVEG-ESKEYGKMEIEVKGKSEIFGS 129

Query: 466 LSSSTVN-VWMSHGDEAVKLPAGFTAVAKSHQGAIVAIENSERRIYGFQFHPEVMHTEHG 642
            S      VWMSHGDEAVKLP GF  VA+S QGA+ A+E+ +++IYG Q+HPEV H+  G
Sbjct: 130 ESGGEKQMVWMSHGDEAVKLPEGFEVVAQSAQGAVAALESRKKKIYGLQYHPEVTHSPKG 189

Query: 643 MEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGPD*HVICALSGGVD 792
           ME ++HFL  +  V ADW M  ++EE++  I   V  D HVICALSGGVD
Sbjct: 190 METLRHFLFDVCGVSADWKMEDLMEEEIKVINKTVASDEHVICALSGGVD 239

>ref|NP_176553.1| GMP synthase [glutamine-hydrolyzing] (glutamine amidotransferase),
           putative [Arabidopsis thaliana] gi|25293814|pir||E96661
           GMP synthase, 61700-64653 [imported] - Arabidopsis
           thaliana gi|12324937|gb|AAG52416.1|AC011622_4 GMP
           synthase; 61700-64653 [Arabidopsis thaliana]
          Length = 534

 Score =  246 bits (627), Expect = 4e-64
 Identities = 122/230 (53%), Positives = 157/230 (68%), Gaps = 1/230 (0%)
 Frame = +1

Query: 106 VLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDRIKGVNPRVVILSGGPNSVHVEGSP 285
           VLILDYGSQYT LITRR+R L++FS++  G +SL  I   NPRVVILSGGP+SVH   +P
Sbjct: 11  VLILDYGSQYTHLITRRIRSLNVFSLVISGTSSLKSITSYNPRVVILSGGPHSVHALDAP 70

Query: 286 RVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVKPAVHGGEYGRMPMDIAPSSQLFDF 465
             P+GF E+     V VLG+CYG+Q+I   LGG V       EYG+M +++   S++F  
Sbjct: 71  SFPEGFIEWAESNGVSVLGICYGLQLIVQKLGGVVVEG-ESKEYGKMEIEVKGKSEIFGS 129

Query: 466 LSSSTVN-VWMSHGDEAVKLPAGFTAVAKSHQGAIVAIENSERRIYGFQFHPEVMHTEHG 642
            S      VWMSHGDEAVKLP GF  VA+S QGA+ A+E+ +++IYG Q+HPEV H+  G
Sbjct: 130 ESGGEKQMVWMSHGDEAVKLPEGFEVVAQSAQGAVAALESRKKKIYGLQYHPEVTHSPKG 189

Query: 643 MEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGPD*HVICALSGGVD 792
           ME ++HFL  +  V ADW M  ++EE++  I   V  D HVICALSGGVD
Sbjct: 190 METLRHFLFDVCGVSADWKMEDLMEEEIKVINKTVASDEHVICALSGGVD 239

>dbj|BAC22314.1| putative GMP synthase [Oryza sativa (japonica cultivar-group)]
          Length = 544

 Score =  246 bits (627), Expect = 4e-64
 Identities = 123/232 (53%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
 Frame = +1

Query: 103 VVLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDRIKGVNPRVVILSGGPNSVHVEGS 282
           +VLILD+GSQYT LITRRVR+L + S+   G A L  + G+ PR V+LSGGP+SVH  G+
Sbjct: 19  LVLILDFGSQYTHLITRRVRQLGVLSLCVSGTAPLASLAGLRPRAVVLSGGPHSVHASGA 78

Query: 283 PRVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVKPAVHGGEYGRMPMDI-APSSQLF 459
           P  P+GF E+ A     VLGVCYGMQ++   LGG V+ A    EYG+M +++ A SS L+
Sbjct: 79  PTFPEGFLEFAAGAGAHVLGVCYGMQLLVQSLGGAVE-AGEKQEYGKMEVEVTARSSALY 137

Query: 460 -DFLSSSTVNVWMSHGDEAVKLPAGFTAVAKSHQGAIVAIENSERRIYGFQFHPEVMHTE 636
            +        VWMSHGDE V+LP GF  VA+S QGA+ A+EN E+R YG Q+HPEV H+ 
Sbjct: 138 GEGEVGKRQTVWMSHGDEVVRLPEGFEVVARSVQGAVAAVENREKRFYGLQYHPEVTHSP 197

Query: 637 HGMEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGPD*HVICALSGGVD 792
            GME ++ FL  +  + ADW M  VL+E++  I++ VGPD HVICALSGGVD
Sbjct: 198 QGMETLRRFLFDVCGIKADWKMQDVLDEEIRTIQSMVGPDEHVICALSGGVD 249

>ref|ZP_00058024.1| COG0519: GMP synthase, PP-ATPase domain/subunit [Thermobifida
           fusca]
          Length = 569

 Score =  206 bits (524), Expect = 3e-52
 Identities = 105/253 (41%), Positives = 156/253 (61%), Gaps = 2/253 (0%)
 Frame = +1

Query: 40  ALSAAPESRHKMSVASAHQHA--VVLILDYGSQYTQLITRRVRELSMFSVLFPGDASLDR 213
           ++S +P     +SVA A +     VL++D+G+QY QLI RRVRE  ++S + P    ++ 
Sbjct: 31  SVSVSPLEGRYVSVAGAPESTFDTVLVVDFGAQYAQLIARRVRECHVYSEIVPPTMPVEE 90

Query: 214 IKGVNPRVVILSGGPNSVHVEGSPRVPDGFFEYCAEKNVPVLGVCYGMQMITHLLGGEVK 393
           +    P+ +ILSGGP+SV+ +G+P+ P G F+      VP+LG+CYG Q++   LGG V+
Sbjct: 91  MLAKKPKAIILSGGPSSVYADGAPQAPPGLFD----TGVPILGICYGFQVMAQTLGGTVE 146

Query: 394 PAVHGGEYGRMPMDIAPSSQLFDFLSSSTVNVWMSHGDEAVKLPAGFTAVAKSHQGAIVA 573
                 EYGR  +++A  S LF  L      VWMSHGD   ++P GFT   ++    + A
Sbjct: 147 RTGRS-EYGRTTINVATDSLLFHSLPQQQT-VWMSHGDAVSQVPDGFTVTGQTADAPVAA 204

Query: 574 IENSERRIYGFQFHPEVMHTEHGMEMIKHFLIGIAAVPADWNMGQVLEEQMAKIKAQVGP 753
           +E+ +R +YG QFHPEV+HTEHG  +++HFL   A     W M  ++E+Q+A+I+AQ+G 
Sbjct: 205 MEHRDRALYGVQFHPEVVHTEHGRAVLQHFLYEAAGCRPTWTMVNIVEDQVARIRAQIGS 264

Query: 754 D*HVICALSGGVD 792
               IC LSGGVD
Sbjct: 265 K-RAICGLSGGVD 276



EST assemble image


clone accession position
1 LCL098g03_r AV631723 1 406
2 MXL070d05_r BP097115 132 494
3 CM088g08_r AV393090 195 792




Chlamydomonas reinhardtii
Kazusa DNA Research Institute