KCC001734A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001734A_C01 KCC001734A_c01
GTCATGACCAAGCTGATCCCCCGCAACACTGTCATCCCCACCAAGAAGTCGCAGACCTTC
ACTACCTACCAGGACCAGCAGACCACCGTGTCCATCCAGGTGTACGAGGGCGAGCGCGCC
ATGACCAAGGACAACCACAAGCTGGGCCAGTTCGACCTGAACGGTATCCCGCCGGCCCCC
CGCGGCACCCCTCAGATTGAGGTGACGTTCGAGGTGGACGCCAACGGTATCCTGAACGTG
GCCGCTGAGGACAAGGGCACCGGCAAGAAGGAGAAGATCACCATCACCGCCGAGAAGGGT
CGCCTGAGCCAGGACGACATTGAGCGCATGGTGAAGGAGGCTGAGGAGTTTGCGGAGCAG
GACAAGGCCGTCAAGGCCAAGATCGACGCCCGCAACCAGCTGGAGACCTACTGCTACAAC
ATGAAGAGCACCGTGGAGGACAAGATGAAGGACAAGATCGAGGAGGAGGACAAGGAGAAG
ATCACC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001734A_C01 KCC001734A_c01
         (486 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC37635.1| luminal binding protein, BiP [Scherffelia dubia]      274  5e-73
pir||JQ0966 dnaK-type molecular chaperone - maize (fragment)          264  5e-70
gb|AAA92743.1| polypeptide chain-binding protein                      264  5e-70
sp|P24067|BIP2_MAIZE Luminal binding protein 2 precursor (BiP2) ...   264  5e-70
sp|O24581|BIP3_MAIZE Luminal binding protein 3 precursor (BiP3) ...   264  5e-70

>emb|CAC37635.1| luminal binding protein, BiP [Scherffelia dubia]
          Length = 665

 Score =  274 bits (700), Expect = 5e-73
 Identities = 136/163 (83%), Positives = 150/163 (91%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQVYEGERAMTKDNHKLGQFDLNGIPPAP 180
           VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQV+EGER MT+D H LG+FDLNGIPPAP
Sbjct: 442 VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQVFEGERTMTRDCHLLGKFDLNGIPPAP 501

Query: 181 RGTPQIEVTFEVDANGILNVAAEDKGTGKKEKITITAEKGRLSQDDIERMVKEAEEFAEQ 360
           RG PQIEVTFEVDANGILNVAAEDKGTGKKEKI IT +KGRLSQ++IERMV+EAEEFA++
Sbjct: 502 RGVPQIEVTFEVDANGILNVAAEDKGTGKKEKIVITNDKGRLSQEEIERMVQEAEEFADE 561

Query: 361 DKAVKAKIDARNQLETYCYNMKSTVE--DKMKDKIEEEDKEKI 483
           DK VK +IDARN LETYCYNMK+TVE  DK+ DK+ EEDKEK+
Sbjct: 562 DKKVKERIDARNSLETYCYNMKNTVEDSDKLADKLAEEDKEKV 604

>pir||JQ0966 dnaK-type molecular chaperone - maize (fragment)
          Length = 467

 Score =  264 bits (674), Expect = 5e-70
 Identities = 133/163 (81%), Positives = 148/163 (90%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQVYEGERAMTKDNHKLGQFDLNGIPPAP 180
           VMTKLIPRNTVIPTKKSQ FTTYQDQQTTVSIQV+EGER+MTKD   LG+FDLNGI PAP
Sbjct: 242 VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLNGIAPAP 301

Query: 181 RGTPQIEVTFEVDANGILNVAAEDKGTGKKEKITITAEKGRLSQDDIERMVKEAEEFAEQ 360
           RGTPQIEVTFEVDANGILNV AEDKGTGK EKITIT EKGRLSQ++I+RMV+EAEEFAE+
Sbjct: 302 RGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEE 361

Query: 361 DKAVKAKIDARNQLETYCYNMKSTV--EDKMKDKIEEEDKEKI 483
           DK VK +IDARNQLETY YNMK+TV  +DK+ DK+E E+KEK+
Sbjct: 362 DKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKV 404

>gb|AAA92743.1| polypeptide chain-binding protein
          Length = 486

 Score =  264 bits (674), Expect = 5e-70
 Identities = 133/163 (81%), Positives = 148/163 (90%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQVYEGERAMTKDNHKLGQFDLNGIPPAP 180
           VMTKLIPRNTVIPTKKSQ FTTYQDQQTTVSIQV+EGER+MTKD   LG+FDLNGI PAP
Sbjct: 242 VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLNGIAPAP 301

Query: 181 RGTPQIEVTFEVDANGILNVAAEDKGTGKKEKITITAEKGRLSQDDIERMVKEAEEFAEQ 360
           RGTPQIEVTFEVDANGILNV AEDKGTGK EKITIT EKGRLSQ++I+RMV+EAEEFAE+
Sbjct: 302 RGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEE 361

Query: 361 DKAVKAKIDARNQLETYCYNMKSTV--EDKMKDKIEEEDKEKI 483
           DK VK +IDARNQLETY YNMK+TV  +DK+ DK+E E+KEK+
Sbjct: 362 DKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKV 404

>sp|P24067|BIP2_MAIZE Luminal binding protein 2 precursor (BiP2) (Heat shock protein 70
           homolog 2) (B70) (B-70) gi|7441875|pir||T04078 dnaK-type
           molecular chaperone cBiPe2 - maize
           gi|1575128|gb|AAC49899.1| lumenal binding protein cBiPe2
           [Zea mays]
          Length = 663

 Score =  264 bits (674), Expect = 5e-70
 Identities = 133/163 (81%), Positives = 148/163 (90%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQVYEGERAMTKDNHKLGQFDLNGIPPAP 180
           VMTKLIPRNTVIPTKKSQ FTTYQDQQTTVSIQV+EGER+MTKD   LG+FDLNGI PAP
Sbjct: 438 VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLNGIAPAP 497

Query: 181 RGTPQIEVTFEVDANGILNVAAEDKGTGKKEKITITAEKGRLSQDDIERMVKEAEEFAEQ 360
           RGTPQIEVTFEVDANGILNV AEDKGTGK EKITIT EKGRLSQ++I+RMV+EAEEFAE+
Sbjct: 498 RGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEE 557

Query: 361 DKAVKAKIDARNQLETYCYNMKSTV--EDKMKDKIEEEDKEKI 483
           DK VK +IDARNQLETY YNMK+TV  +DK+ DK+E E+KEK+
Sbjct: 558 DKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKV 600

>sp|O24581|BIP3_MAIZE Luminal binding protein 3 precursor (BiP3) gi|7441876|pir||T04080
           dnaK-type molecular chaperone cBiPe3 - maize
           gi|1575130|gb|AAC49900.1| lumenal binding protein cBiPe3
           [Zea mays]
          Length = 663

 Score =  264 bits (674), Expect = 5e-70
 Identities = 133/163 (81%), Positives = 148/163 (90%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   VMTKLIPRNTVIPTKKSQTFTTYQDQQTTVSIQVYEGERAMTKDNHKLGQFDLNGIPPAP 180
           VMTKLIPRNTVIPTKKSQ FTTYQDQQTTVSIQV+EGER+MTKD   LG+FDLNGIP AP
Sbjct: 438 VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLNGIPSAP 497

Query: 181 RGTPQIEVTFEVDANGILNVAAEDKGTGKKEKITITAEKGRLSQDDIERMVKEAEEFAEQ 360
           RGTPQIEVTFEVDANGILNV AEDKGTGK EKITIT EKGRLSQ++I+RMV+EAEEFAE+
Sbjct: 498 RGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEE 557

Query: 361 DKAVKAKIDARNQLETYCYNMKSTV--EDKMKDKIEEEDKEKI 483
           DK VK +IDARNQLETY YNMK+TV  +DK+ DK+E E+KEK+
Sbjct: 558 DKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKV 600



EST assemble image


clone accession position
1 MX219b02_r BP090122 1 489
2 CM087h07_r AV392433 58 591




Chlamydomonas reinhardtii
Kazusa DNA Research Institute