KCC001733A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001733A_C01 KCC001733A_c01
ggttgatgttgtATAGGTAGTAATCACAGATATGTTGCGACTCGTATAACATAGGTCGGA
GCTCGGTTGCGTAAACTCTAGCTAAACTCGCTCGACTAAGACCAGCCCCACATAGCTAGC
AATCAACTCTGCCATCATCTAGCTTCCTAAAATGACGGCAGAGAAGGAAACCAGCATGCT
TCCTTGTGCAAGGTGTGCGGCACCCGCCAAGCTGCAGTGCCCCAACTGCCTCAAGTTGGG
CCTGCCGAAGGAGGCGAGCGTGTTTTGCTCACAGGAGTGCTTCAAGGCTGCCTGGCCTGA
GCATAAGAAGGTCCACTCGCCGCCCGCGGACGCATGGCTGTTCTGCACCAAGCGGGGCAA
GGCACGCGCTGACGCGATGCCGGACTTTGAATGGACGGGACCGCTGCGGCCATACCGCAT
CAGCCCCATGCGCGAGATTCCCGCCCACATTCCGAAGCCGGACTACCATAAGGACGGCTA
CCCCTACAAGGAGCAGGAGAGCCGCCAGCAACAAATAGTGCCCATCCGTGGTCCGGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001733A_C01 KCC001733A_c01
         (538 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_182049.1| methionine aminopeptidase -related [Arabidopsis...   135  3e-31
gb|AAM65219.1| putative methionine aminopeptidase [Arabidopsis t...   135  3e-31
gb|AAM94922.1| putative methionine aminopeptidase [Oryza sativa ...   128  5e-29
ref|NP_500396.1| metallopeptidase family M24 (4E448) [Caenorhabd...    94  1e-18
gb|AAK68429.2|AC024757_8 Hypothetical protein Y37E11AL.7 [Caenor...    94  1e-18

>ref|NP_182049.1| methionine aminopeptidase -related [Arabidopsis thaliana]
           gi|12229672|sp|Q9SLN5|AMP1_ARATH Probable methionine
           aminopeptidase 1 (MetAP 1) (MAP 1) (Peptidase M 1)
           gi|25408938|pir||B84888 probable methionine
           aminopeptidase [imported] - Arabidopsis thaliana
           gi|2583129|gb|AAB82638.1| putative methionine
           aminopeptidase [Arabidopsis thaliana]
           gi|11320954|gb|AAG33974.1|AF250960_1 methionine
           aminopeptidase-like protein [Arabidopsis thaliana]
           gi|20466153|gb|AAM20394.1| putative methionine
           aminopeptidase [Arabidopsis thaliana]
           gi|30725654|gb|AAP37849.1| At2g45240 [Arabidopsis
           thaliana]
          Length = 398

 Score =  135 bits (340), Expect = 3e-31
 Identities = 66/145 (45%), Positives = 84/145 (57%), Gaps = 16/145 (11%)
 Frame = +2

Query: 152 MTAEKETSM---LPCARCAAPAKLQCPNCLKLGLPKEASVFCSQECFKAAWPEHKKVHSP 322
           M +E + S    L CARC  PA LQCP C+ L LP+E + FC+QECFKAAW  HK VH  
Sbjct: 1   MASESDASSIATLSCARCEKPAHLQCPKCIDLKLPREQASFCTQECFKAAWSSHKSVHVK 60

Query: 323 P-------------ADAWLFCTKRGKARADAMPDFEWTGPLRPYRISPMREIPAHIPKPD 463
                         +  WL+C K+G+AR   +P F+WTGPL+ Y IS  R +PA I KPD
Sbjct: 61  AQLSSIGDQNSDLISQGWLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEIEKPD 120

Query: 464 YHKDGYPYKEQESRQQQIVPIRGPD 538
           +  DG P  E  S  Q +V I+ P+
Sbjct: 121 WAIDGTPKVEPNSDLQHVVEIKTPE 145

>gb|AAM65219.1| putative methionine aminopeptidase [Arabidopsis thaliana]
          Length = 398

 Score =  135 bits (340), Expect = 3e-31
 Identities = 66/145 (45%), Positives = 84/145 (57%), Gaps = 16/145 (11%)
 Frame = +2

Query: 152 MTAEKETSM---LPCARCAAPAKLQCPNCLKLGLPKEASVFCSQECFKAAWPEHKKVHSP 322
           M +E + S    L CARC  PA LQCP C+ L LP+E + FC+QECFKAAW  HK VH  
Sbjct: 1   MASESDASSIATLSCARCEKPAHLQCPKCIHLKLPREQASFCTQECFKAAWSSHKSVHVK 60

Query: 323 P-------------ADAWLFCTKRGKARADAMPDFEWTGPLRPYRISPMREIPAHIPKPD 463
                         +  WL+C K+G+AR   +P F+WTGPL+ Y IS  R +PA I KPD
Sbjct: 61  AQLSSIGDQNSDLISQGWLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEIEKPD 120

Query: 464 YHKDGYPYKEQESRQQQIVPIRGPD 538
           +  DG P  E  S  Q +V I+ P+
Sbjct: 121 WAIDGTPKVEPNSDLQHVVEIKTPE 145

>gb|AAM94922.1| putative methionine aminopeptidase [Oryza sativa (japonica
           cultivar-group)] gi|31432985|gb|AAP54549.1| putative
           methionine aminopeptidase [Oryza sativa (japonica
           cultivar-group)]
          Length = 374

 Score =  128 bits (321), Expect = 5e-29
 Identities = 59/130 (45%), Positives = 77/130 (58%), Gaps = 8/130 (6%)
 Frame = +2

Query: 173 SMLPCARCAAPAKLQCPNCLKLGLPKEASVFCSQECFKAAWPEHKKVH--------SPPA 328
           S + CARC  PA LQCP C +L L +E + FC+Q+CFK AW  HK VH            
Sbjct: 8   SSIACARCGKPASLQCPKCAQLKLLREGAAFCTQDCFKEAWSSHKSVHIKLDALTLQQTP 67

Query: 329 DAWLFCTKRGKARADAMPDFEWTGPLRPYRISPMREIPAHIPKPDYHKDGYPYKEQESRQ 508
           + W +C K+G+ R   +P F+WTGPLRPY IS M  +P  I KPD+  DG P  E +S  
Sbjct: 68  EGWQYCLKKGRTRTSQLPRFDWTGPLRPYPISKMCVVPDKIEKPDWALDGTPKIEPDSDL 127

Query: 509 QQIVPIRGPD 538
           Q+ V I+ P+
Sbjct: 128 QKRVEIKTPE 137

>ref|NP_500396.1| metallopeptidase family M24 (4E448) [Caenorhabditis elegans]
          Length = 388

 Score = 94.0 bits (232), Expect = 1e-18
 Identities = 46/119 (38%), Positives = 66/119 (54%), Gaps = 5/119 (4%)
 Frame = +2

Query: 185 CARCAAPAKLQCPNCLKLGLPKEASVFCSQECFKAAWPEHKKVHSP---PADAWLFCTKR 355
           C  C  PAKL+CP C+K+ LP   + FC Q CFKA WP HK  HS    P + W      
Sbjct: 9   CIGCQKPAKLRCPTCIKMSLPD--AYFCDQSCFKAFWPIHKFSHSDVNGPYNPW------ 60

Query: 356 GKARADAMPDFEWTGPLRPYRISPMREIPAHIPKPDY--HKDGYPYKEQESRQQQIVPI 526
                   P + +TG LRP R++  R +P HIP+PDY  H  G   +E++S+ ++++ +
Sbjct: 61  --------PCYSFTGSLRPGRVTDRRPVPDHIPRPDYALHPQGVSLEERQSKSERVIKV 111

>gb|AAK68429.2|AC024757_8 Hypothetical protein Y37E11AL.7 [Caenorhabditis elegans]
          Length = 371

 Score = 94.0 bits (232), Expect = 1e-18
 Identities = 46/119 (38%), Positives = 66/119 (54%), Gaps = 5/119 (4%)
 Frame = +2

Query: 185 CARCAAPAKLQCPNCLKLGLPKEASVFCSQECFKAAWPEHKKVHSP---PADAWLFCTKR 355
           C  C  PAKL+CP C+K+ LP   + FC Q CFKA WP HK  HS    P + W      
Sbjct: 9   CIGCQKPAKLRCPTCIKMSLPD--AYFCDQSCFKAFWPIHKFSHSDVNGPYNPW------ 60

Query: 356 GKARADAMPDFEWTGPLRPYRISPMREIPAHIPKPDY--HKDGYPYKEQESRQQQIVPI 526
                   P + +TG LRP R++  R +P HIP+PDY  H  G   +E++S+ ++++ +
Sbjct: 61  --------PCYSFTGSLRPGRVTDRRPVPDHIPRPDYALHPQGVSLEERQSKSERVIKV 111



EST assemble image


clone accession position
1 MX022e06_r BP086999 1 372
2 CM087g06_r AV392481 6 538
3 HC081f06_r AV638077 27 479
4 MX212b03_r BP089680 27 329
5 MXL014h05_r BP093863 27 253
6 MX059f04_r BP088407 34 368
7 LC068b03_r AV623747 38 472




Chlamydomonas reinhardtii
Kazusa DNA Research Institute