KCC001732A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001732A_C01 KCC001732A_c01
gcacgagggtatcgcgagaaacgatgcaacgcgtcttggtcctgaacgcgggcagcagct
cgcttaagtttaagctgttcACAGCGGCCGGTACTTCTCTTGGAGAAGCAGGCCTTGGTG
GGCAGTTCGATCGTATTGGCGATGTCGCGAATTGCACCCTCAAGGCAAGCCAGCCTGGCG
CCGCGCCGGGCATGAAGCCGCGCAAATGGGAGCTCAAAGTGCCGGCGCAGGATCACGTGG
GCGCCATGAAGGGCATCCTGGATTTCATCAAGGAGAATGTCTCGGCGACTTTTGCGAGCG
AGGTGGTGGCTGTGGGGCACCGCATCGTCCATGGTCTGGACCTGAGCCAGCCGGTGCTGC
TGACGCCCTCCAGCACGGCCACCATCAAGCAGGCGGCTGTGCTGGCGCCGTTGCACAACC
CGCCCGGGCTGCAGGGCATTGAGGCGGCCACGGAGGTGTTCAGCGGCGTGCCGCAGGTTG
CTGTGTTTGACACGGACTTCCACCAGACCATGCCGCCGCACGCCTACATGTACGGACTGC
CATACGAACTGTACGAGAAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001732A_C01 KCC001732A_c01
         (561 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_632519.1| Acetate kinase [Methanosarcina mazei Goe1] gi|2...   121  6e-27
sp|Q8PZJ7|ACKA_METMA Acetate kinase (Acetokinase)                     121  7e-27
dbj|BAB71961.2| acetate kinase [Methanosarcina mazei]                 121  7e-27
ref|NP_390825.1| acetate kinase [Bacillus subtilis] gi|584719|sp...   120  1e-26
ref|NP_860839.1| acetate kinase [Helicobacter hepaticus ATCC 514...   119  2e-26

>ref|NP_632519.1| Acetate kinase [Methanosarcina mazei Goe1]
           gi|20904873|gb|AAM30191.1| Acetate kinase
           [Methanosarcina mazei Goe1]
          Length = 414

 Score =  121 bits (304), Expect = 6e-27
 Identities = 73/183 (39%), Positives = 102/183 (54%), Gaps = 3/183 (1%)
 Frame = +3

Query: 21  TMQRVLVLNAGSSSLKFKLFTAAGTSLGEAGLGGQFDRIGDVANCTLKASQPGAAPGMKP 200
           +  +VLV+NAGSSSLK++L      S    GL    +RIG + N  +   +         
Sbjct: 5   SQMKVLVINAGSSSLKYQLIDMTNESALAIGL---CERIG-IDNSIITQKR------FDG 54

Query: 201 RKWELKVPAQDHVGAMKGILDFIKENVSATFAS--EVVAVGHRIVHGLD-LSQPVLLTPS 371
           +K E +    +H  A++ ++  + ++      S  E+ AVGHR+VHG +  +   L+   
Sbjct: 55  KKLEKQTDLPNHKIALEEVVKALTDSEFGVIKSMDEINAVGHRVVHGGEKFNSSALINEG 114

Query: 372 STATIKQAAVLAPLHNPPGLQGIEAATEVFSGVPQVAVFDTDFHQTMPPHAYMYGLPYEL 551
               IK    LAPLHNPP + GI +  E+  GVP VAVFDT FH T+PP+AYMY LPYEL
Sbjct: 115 VEQAIKDCFELAPLHNPPNMMGISSCQEIMPGVPMVAVFDTAFHHTIPPYAYMYALPYEL 174

Query: 552 YEK 560
           YEK
Sbjct: 175 YEK 177

>sp|Q8PZJ7|ACKA_METMA Acetate kinase (Acetokinase)
          Length = 408

 Score =  121 bits (303), Expect = 7e-27
 Identities = 73/180 (40%), Positives = 101/180 (55%), Gaps = 3/180 (1%)
 Frame = +3

Query: 30  RVLVLNAGSSSLKFKLFTAAGTSLGEAGLGGQFDRIGDVANCTLKASQPGAAPGMKPRKW 209
           +VLV+NAGSSSLK++L      S    GL    +RIG + N  +   +         +K 
Sbjct: 2   KVLVINAGSSSLKYQLIDMTNESALAIGL---CERIG-IDNSIITQKR------FDGKKL 51

Query: 210 ELKVPAQDHVGAMKGILDFIKENVSATFAS--EVVAVGHRIVHGLD-LSQPVLLTPSSTA 380
           E +    +H  A++ ++  + ++      S  E+ AVGHR+VHG +  +   L+      
Sbjct: 52  EKQTDLPNHKIALEEVVKALTDSEFGVIKSMDEINAVGHRVVHGGEKFNSSALINEGVEQ 111

Query: 381 TIKQAAVLAPLHNPPGLQGIEAATEVFSGVPQVAVFDTDFHQTMPPHAYMYGLPYELYEK 560
            IK    LAPLHNPP + GI +  E+  GVP VAVFDT FH T+PP+AYMY LPYELYEK
Sbjct: 112 AIKDCFELAPLHNPPNMMGISSCQEIMPGVPMVAVFDTAFHHTIPPYAYMYALPYELYEK 171

>dbj|BAB71961.2| acetate kinase [Methanosarcina mazei]
          Length = 408

 Score =  121 bits (303), Expect = 7e-27
 Identities = 73/180 (40%), Positives = 101/180 (55%), Gaps = 3/180 (1%)
 Frame = +3

Query: 30  RVLVLNAGSSSLKFKLFTAAGTSLGEAGLGGQFDRIGDVANCTLKASQPGAAPGMKPRKW 209
           +VLV+NAGSSSLK++L      S    GL    +RIG + N  +   +         +K 
Sbjct: 2   KVLVINAGSSSLKYQLIDMTNESALAIGL---CERIG-IDNSIITQKR------FDGKKL 51

Query: 210 ELKVPAQDHVGAMKGILDFIKENVSATFAS--EVVAVGHRIVHGLD-LSQPVLLTPSSTA 380
           E +    +H  A++ ++  + ++      S  E+ AVGHR+VHG +  +   L+      
Sbjct: 52  EKQTDLPNHKIALEEVVKALTDSEFGVIKSMDEINAVGHRVVHGGEKFNSSALINEGVEQ 111

Query: 381 TIKQAAVLAPLHNPPGLQGIEAATEVFSGVPQVAVFDTDFHQTMPPHAYMYGLPYELYEK 560
            IK    LAPLHNPP + GI +  E+  GVP VAVFDT FH T+PP+AYMY LPYELYEK
Sbjct: 112 AIKDCFELAPLHNPPNMMGISSCQEIMPGVPMVAVFDTAFHHTIPPYAYMYALPYELYEK 171

>ref|NP_390825.1| acetate kinase [Bacillus subtilis] gi|584719|sp|P37877|ACKA_BACSU
           Acetate kinase (Acetokinase) gi|1075817|pir||B49935
           acetate kinase (EC 2.7.2.1) ackA - Bacillus subtilis
           gi|405134|gb|AAC36857.1| acetate kinase
           gi|2293240|gb|AAC00318.1| acetate kinase [Bacillus
           subtilis] gi|2635431|emb|CAB14925.1| acetate kinase
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 395

 Score =  120 bits (301), Expect = 1e-26
 Identities = 75/180 (41%), Positives = 101/180 (55%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  MQRVLVLNAGSSSLKFKLFTAAGTSLGEAGLGGQFDRIGDVANCTLKASQPGAAPGMKPR 203
           M +++ +NAGSSSLKF+LF     ++   GL    +RIG +A+     S  G        
Sbjct: 1   MSKIIAINAGSSSLKFQLFEMPSETVLTKGL---VERIG-IADSVFTISVNG-------E 49

Query: 204 KWELKVPAQDHVGAMKGILDFIKENVSATFASEVVAVGHRIVHGLD-LSQPVLLTPSSTA 380
           K        DH  A+K +L+ + E       +E+  +GHR+VHG +  S  VLLT  +  
Sbjct: 50  KNTEVTDIPDHAVAVKMLLNKLTEFGIIKDLNEIDGIGHRVVHGGEKFSDSVLLTDETIK 109

Query: 381 TIKQAAVLAPLHNPPGLQGIEAATEVFSGVPQVAVFDTDFHQTMPPHAYMYGLPYELYEK 560
            I+  + LAPLHNP  + GI+A  EV   VP VAVFDT FHQTMP  +Y+Y LPYE YEK
Sbjct: 110 EIEDISELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPYEYYEK 169

>ref|NP_860839.1| acetate kinase [Helicobacter hepaticus ATCC 51449]
           gi|32262859|gb|AAP77905.1| acetate kinase [Helicobacter
           hepaticus ATCC 51449]
          Length = 401

 Score =  119 bits (299), Expect = 2e-26
 Identities = 71/179 (39%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
 Frame = +3

Query: 33  VLVLNAGSSSLKFKLFTAAGTSLGEAGLGGQFDRIGDVANCTLKASQPGAAPGMKPRKWE 212
           +LV+N GSSSLKF+L     T   +    G  DRIG   +     ++ G       +K E
Sbjct: 3   ILVINCGSSSLKFQLID---TDTEKVLANGICDRIGIEGSVLQYKNKEG-------KKSE 52

Query: 213 LKVPAQDHVGAMKGILDFI--KENVSATFASEVVAVGHRIVHGLDL-SQPVLLTPSSTAT 383
            K    +H  A++ +L+ +  K+N + +   ++ A+GHR+VHG +   + VL+  +  A 
Sbjct: 53  KKEAMPNHTKAIEMVLEALTNKQNGAISSLDDIRAIGHRVVHGGEFFKESVLINDTVIAH 112

Query: 384 IKQAAVLAPLHNPPGLQGIEAATEVFSGVPQVAVFDTDFHQTMPPHAYMYGLPYELYEK 560
           IK+ + LAPLHNP  L GI+   +     P VAVFDT FHQ+MPP AY YG+PYE YEK
Sbjct: 113 IKECSDLAPLHNPANLMGIDVCKQKMPNTPMVAVFDTAFHQSMPPQAYTYGVPYEWYEK 171



EST assemble image


clone accession position
1 CM087f02_r AV392479 1 458
2 CM096h02_r AV392748 96 561




Chlamydomonas reinhardtii
Kazusa DNA Research Institute