Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001726A_C01 KCC001726A_c01
(1010 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564560.1| ATP-dependent Clp protease proteolytic subunit ... 115 2e-24
ref|NP_113273.1| ATP-dependent Clp protease proteolytic subunit ... 112 1e-23
ref|NP_682549.1| ATP-dependent Clp protease proteolytic subunit ... 109 9e-23
ref|ZP_00108611.1| COG0740: Protease subunit of ATP-dependent Cl... 109 9e-23
ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit ... 108 2e-22
>ref|NP_564560.1| ATP-dependent Clp protease proteolytic subunit (ClpR1) [Arabidopsis
thaliana] gi|25453549|pir||T52451 endopeptidase Clp chain
P extended inactive homolog clpP5 [similarity] -
Arabidopsis thaliana gi|5360595|dbj|BAA82069.1| nClpP5
[Arabidopsis thaliana]
gi|8569101|gb|AAF76446.1|AC015445_13 Identical to nClpP5
from Arabidopsis thaliana gb|AB022330 and contains
prenyltransferase PF|00432 and CLP protease PF|00574
domains. ESTs gb|H76908, gb|AA605567, gb|T21932,
gb|T22976 come from this gene gi|15010752|gb|AAK74035.1|
At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|23308343|gb|AAN18141.1| At1g49970/F2J10_5 [Arabidopsis
thaliana]
Length = 387
Score = 115 bits (287), Expect = 2e-24
Identities = 59/131 (45%), Positives = 85/131 (64%)
Frame = +1
Query: 613 PPDLPSLLLQQRVIYISMPFLPSVTELVVAQCYYLDFDDRNRQRPIYVYLNSTGCINDKG 792
PPDLPSLLL R+ Y+ MP +P+VTEL+VAQ +LD+D N +PIY+Y+NS G N+K
Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYD--NPTKPIYLYINSPGTQNEKM 226
Query: 793 QAISADNEFYAIWAALGFTRAPLYTGVTWKAQNQAAVLLSAGQKGHRYSFPHAKISTAPP 972
+ + ++ E YAI + + ++ +YT A QAA+LLS G+KG+R PH+ P
Sbjct: 227 ETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLP 286
Query: 973 VMNRVFGQAVD 1005
+NR G A+D
Sbjct: 287 KVNRSSGAAID 297
>ref|NP_113273.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|25289870|pir||F90087 ATP-dependent Clp protease
proteolytic subunit [imported] - Guillardia theta
nucleomorph gi|13794458|gb|AAK39833.1|AF165818_41
ATP-dependent Clp protease proteolytic subunit
[Guillardia theta]
Length = 254
Score = 112 bits (279), Expect = 1e-23
Identities = 57/135 (42%), Positives = 85/135 (62%)
Frame = +1
Query: 601 RFGNPPDLPSLLLQQRVIYISMPFLPSVTELVVAQCYYLDFDDRNRQRPIYVYLNSTGCI 780
R G PPDLPSLLL R++Y+ MP +P+VTEL+VA+ YL ++ N ++P+Y+YLNSTG
Sbjct: 53 RIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLYLQYE--NSEKPVYMYLNSTGTS 110
Query: 781 NDKGQAISADNEFYAIWAALGFTRAPLYTGVTWKAQNQAAVLLSAGQKGHRYSFPHAKIS 960
N G + + E +AI + + + P++T +A A+LLS+G+ G R + P+A I
Sbjct: 111 NPDGSSAGFETEAFAIADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIM 170
Query: 961 TAPPVMNRVFGQAVD 1005
P +R GQA D
Sbjct: 171 IHQPT-SRARGQASD 184
>ref|NP_682549.1| ATP-dependent Clp protease proteolytic subunit 3
[Thermosynechococcus elongatus BP-1]
gi|22295485|dbj|BAC09311.1| ATP-dependent Clp protease
proteolytic subunit 3 [Thermosynechococcus elongatus
BP-1]
Length = 218
Score = 109 bits (272), Expect = 9e-23
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 6/133 (4%)
Frame = +1
Query: 577 PLFLPEAERFGN------PPDLPSLLLQQRVIYISMPFLPSVTELVVAQCYYLDFDDRNR 738
P+ +A +G+ PPDLPSLLL++R++Y+ MP +P+VTEL++A+ YL +DD
Sbjct: 4 PITAAQAAYYGDAYYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLYLQYDD--P 61
Query: 739 QRPIYVYLNSTGCINDKGQAISADNEFYAIWAALGFTRAPLYTGVTWKAQNQAAVLLSAG 918
++PI +Y+NSTG G+ + + E +AI + + + P++T +A AA+LLSAG
Sbjct: 62 EKPIRIYINSTGTSRYDGEPVGFETEAFAICDTMRYIKPPVHTICIGQAMGMAAMLLSAG 121
Query: 919 QKGHRYSFPHAKI 957
KG R S PHA I
Sbjct: 122 TKGCRASLPHATI 134
>ref|ZP_00108611.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Nostoc
punctiforme]
Length = 220
Score = 109 bits (272), Expect = 9e-23
Identities = 57/131 (43%), Positives = 83/131 (62%)
Frame = +1
Query: 613 PPDLPSLLLQQRVIYISMPFLPSVTELVVAQCYYLDFDDRNRQRPIYVYLNSTGCINDKG 792
PPDLPSLLL++R++YI MP +P+VTEL+VA+ +L DD ++PI +Y+NSTG G
Sbjct: 23 PPDLPSLLLKERIVYIGMPLVPAVTELIVAELLFLQSDD--PEKPIKIYINSTGTSGYSG 80
Query: 793 QAISADNEFYAIWAALGFTRAPLYTGVTWKAQNQAAVLLSAGQKGHRYSFPHAKISTAPP 972
+ I + E +AI+ + + + P++T A +A+LLSAG KG R S PH+ I P
Sbjct: 81 EPIGFETEAFAIYDTMRYIKPPIHTICVGSAMGMSAMLLSAGTKGCRASLPHSSIILHQP 140
Query: 973 VMNRVFGQAVD 1005
+ GQA D
Sbjct: 141 -KSYAQGQATD 150
>ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana] gi|22531207|gb|AAM97107.1|
ATP-dependent Clp protease proteolytic subunit (ClpR3),
putative [Arabidopsis thaliana]
gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease
proteolytic subunit (ClpR3), putative [Arabidopsis
thaliana]
Length = 330
Score = 108 bits (269), Expect = 2e-22
Identities = 55/120 (45%), Positives = 77/120 (63%)
Frame = +1
Query: 613 PPDLPSLLLQQRVIYISMPFLPSVTELVVAQCYYLDFDDRNRQRPIYVYLNSTGCINDKG 792
PPDLPS+LL R++YI MP +P+VTELVVA+ YL + D + PIY+Y+NSTG D G
Sbjct: 119 PPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDP--KEPIYIYINSTGTTRDDG 176
Query: 793 QAISADNEFYAIWAALGFTRAPLYTGVTWKAQNQAAVLLSAGQKGHRYSFPHAKISTAPP 972
+ + ++E +AI+ +L + ++T A QA +LLSAG KG R+ PHAK P
Sbjct: 177 ETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQP 236
