Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001716A_C01 KCC001716A_c01
(526 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 42 0.005
ref|ZP_00136916.1| COG3291: FOG: PKD repeat [Pseudomonas aerugin... 41 0.008
ref|ZP_00141762.1| COG1011: Predicted hydrolase (HAD superfamily... 40 0.014
ref|XP_194327.1| RIKEN cDNA 2500002G23 [Mus musculus] 40 0.018
gb|EAA39321.1| GLP_177_2207_3193 [Giardia lamblia ATCC 50803] 40 0.018
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 42.0 bits (97), Expect = 0.005
Identities = 29/74 (39%), Positives = 40/74 (53%)
Frame = +2
Query: 299 TSTAAWSPFSATSARTPTTAWTLWA*ATPSMRTTTSWASGRACAS*AAMRACPPSRSGPR 478
+S A +P ++T+A TPT+A + A +T T TS AS A ACP + G R
Sbjct: 9 SSAATATPSTSTAAGTPTSACSPTATSTS---TRTSSAS-------TAPTACPGTSRGSR 58
Query: 479 PCPCTXASTSRTPA 520
P PC+ +TS T A
Sbjct: 59 PSPCSSTATSSTSA 72
>ref|ZP_00136916.1| COG3291: FOG: PKD repeat [Pseudomonas aeruginosa UCBPP-PA14]
Length = 961
Score = 41.2 bits (95), Expect = 0.008
Identities = 53/174 (30%), Positives = 64/174 (36%), Gaps = 29/174 (16%)
Frame = +3
Query: 84 RKGEMATEDGPRGPMRPEFHYRARGWASL-----PAAGAAKGRLRPGY-RASVRPRRQTE 245
R+ P G RP ++ RG A L PA +GR P + R RPRR
Sbjct: 63 RRAPALRPPAPAGRQRPVAGHQHRG-AELELRDHPAQRPCRGR--PAFQRIPHRPRRT-- 117
Query: 246 AVCDEEGSPVKGRLPCLGR------ARPPGRRSVP--LRQEPLQQP--GPSGPEQ----- 380
GS +G PC+ R A PP RR+ P RQ P P G P Q
Sbjct: 118 ------GSGGQGPHPCVRRHLHPVGAAPPHRRAHPPRRRQRPPAPPRRGSRQPRQDLYRP 171
Query: 381 --------HRQCAQQQVGRVGERVPAERLCGHAPPQDPAQDHVHARXPVHPGRQ 518
+R+C Q E + L P Q DH H R P H RQ
Sbjct: 172 AHLARHRGYRRCLQLSFEHAAELLGQRHLADRRPRQP---DHHHGRRPAHRHRQ 222
>ref|ZP_00141762.1| COG1011: Predicted hydrolase (HAD superfamily) [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 379
Score = 40.4 bits (93), Expect = 0.014
Identities = 35/104 (33%), Positives = 46/104 (43%), Gaps = 8/104 (7%)
Frame = +3
Query: 99 ATEDGPRGPMRPEFHYRARGWASLPAAGAAKGRLRPGYRASV-RPRRQTEAVCDEEGSPV 275
+ G +GP RA G SL AA A GR G R+ V RPRRQ + +
Sbjct: 11 SARQGQQGPRAAGRQGRAPGARSL-AAAARPGR--SGRRSGVHRPRRQAPDATGDPTASA 67
Query: 276 KGRLPCLGRARPPGRRSVPLRQ-------EPLQQPGPSGPEQHR 386
GR P +G A P + LRQ P ++ G + P +HR
Sbjct: 68 PGRRPRVGPAPAPAHAAAFLRQPSAGVVRRPARRAGTARPRRHR 111
>ref|XP_194327.1| RIKEN cDNA 2500002G23 [Mus musculus]
Length = 191
Score = 40.0 bits (92), Expect = 0.018
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Frame = +2
Query: 269 TCQRT---TSVSGTSTAAWSPFSATSARTPTTAWTLWA*ATPSMRTTTSWASGRACAS*A 439
TC T T VSG +TA P A+++R TT W++ S T A + +
Sbjct: 79 TCWNTGASTRVSGPTTA---PSVASASRRSTTCWSISVRTQASGHTPARTAPSASATNSR 135
Query: 440 AMRACPPSRS---GPRPCP---CTXASTSRTP 517
+ C P+R+ PRPCP C+ S+ P
Sbjct: 136 SSTTCGPTRASEHAPRPCPGQMCSQVQGSKAP 167
>gb|EAA39321.1| GLP_177_2207_3193 [Giardia lamblia ATCC 50803]
Length = 328
Score = 40.0 bits (92), Expect = 0.018
Identities = 41/121 (33%), Positives = 47/121 (37%), Gaps = 1/121 (0%)
Frame = +3
Query: 156 GWASLPAAGAAKGRLRPGYRASVRPRRQTEAVCDEEGSPVKGRLPCLGRARPPGRRSVPL 335
G +PA A +GR G R RP R V D V+ RLP R+ PL
Sbjct: 179 GRQRVPAEPARRGRPARGRRREARPVRGARHVAD-----VRRRLP------REVRQPRPL 227
Query: 336 RQEPLQQPGPSGPEQHRQCAQQQVGRVGERVPAERLCG-HAPPQDPAQDHVHARXPVHPG 512
R P P P G + R C R ERVP R G P+ HAR P P
Sbjct: 228 RAGPPVPPAPPGRARPRLC------RKRERVPPGRGRGVRLHPRHADGRAEHARLPARPR 281
Query: 513 R 515
R
Sbjct: 282 R 282
