KCC001712A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001712A_C01 KCC001712A_c01
aataccgattatacagcgcgctgataaacgtcaaggtcacaccgacagctgcgattttcc
gggagccctccttagtaataGTTCCTCCCCCAGGACCATGGACTTGTCTACGGTAGATCT
TGAGTCTTCTCGACAGAAAGCAGCAGCTAGCAAGGAGGCAGAGGCAAAGCAGGAGCAAGG
CGAGGACGTCGTGCTGCTTTTCAGCTTACCGGGAGGCCAGAAGGCTGCGCACAGCTTCAA
GGTGGGCGTGACGGTGGCGTACGTCAAGGCCTTCTTGGCGGAGCAGCACGAGCTGGAGTT
CGCCAAGCTTAAGCTGCTCATGGCCGGGCGCTTGATGATCGACCCGCTGTCGCTCAGCGA
CTGCCCGGGCGTGGCGCCGGGCAAGGAGGTGGAGGTGGAGGTGAACCTGGGCTGAGCAGG
AGGTGGCGGATGGGGGAAGGAGGACGGAGAAAACAAAAAAAAACAAAAACAGAAAAACAA
AAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001712A_C01 KCC001712A_c01
         (483 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox...    53  2e-06
ref|NP_068292.1| PxORF73 peptide [Plutella xylostella granulovir...    50  2e-05
ref|NP_200624.1| formin homology 2 (FH2) domain-containing prote...    48  5e-05
ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ...    48  5e-05
ref|NP_509491.1| putative protein (112.0 kD) (XJ420) [Caenorhabd...    48  7e-05

>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 39/98 (39%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPP-PPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP 267
           PPSP       P SPPP PPP P P P  R   +    S RP +      P+   PPRRP
Sbjct: 181 PPSPPPR---PPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSP---SPPSPRPPPRRP 234

Query: 266 *RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
              PPS PP     P   P +    R P  +P  PLPP
Sbjct: 235 PFPPPSPPP-----PRPPPPAPPPPRPPPPSPPPPLPP 267

 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 36/97 (37%), Positives = 39/97 (40%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PPSP   L   P  PPP PP P+P P S    +    S RP        P    PP  P 
Sbjct: 258 PPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNP- 316

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
             PP  PP S   P   P S    R P  +P  P PP
Sbjct: 317 -PPPRPPPPSPNPPRPPPPSPPPPRPPPPSPNPPRPP 352

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 38/99 (38%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPR-PGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP 267
           PPSP       P  PP PPP P P  P S   +   S   RP  +    +P  + PP  P
Sbjct: 147 PPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPS-PPPSPPPSPPPSPP 205

Query: 266 *RTPPSRPP*SCAQPSGLPVS*K-AARRPRLAPALPLPP 153
            R PPS  P S   PS  P S +   RRP   P  P PP
Sbjct: 206 PRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPP 244

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 37/100 (37%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PPSP   L   P  PPP PP P+P P S      R     P      R P    PP RP 
Sbjct: 268 PPSPPPPLPPPPSPPPPSPPPPSPLPPSP-----RPPKPSPPNNPFPRPPPPNPPPPRPP 322

Query: 263 R---TPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
                PP  PP S   P   P S    R P  +P+ P PP
Sbjct: 323 PPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPP 362

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 32/97 (32%), Positives = 40/97 (40%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP+P       P  PPPPPP P+P P    +       + P +     +P  + PP  P 
Sbjct: 136 PPNP-------PPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPP--SPPPSPPPSPPP 186

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
           R PPS PP   + P   P S      P   P  P PP
Sbjct: 187 RPPPSPPP---SPPPSPPPSPPPRPPPSPNPPSPRPP 220

 Score = 39.7 bits (91), Expect = 0.019
 Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
 Frame = -2

Query: 446 RPPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP 267
           RPP P       P  PPP PP P P P S        +  RP        P    PPR P
Sbjct: 297 RPPKPSPPNNPFPRPPPPNPPPPRPPPPS-------PNPPRP-------PPPSPPPPRPP 342

Query: 266 *RTP--PSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
             +P  P  PP S + P   P      R PR  P  P  P
Sbjct: 343 PPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRRP 382

 Score = 39.7 bits (91), Expect = 0.019
 Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
 Frame = -2

Query: 446 RPPSPIRHLLLSPGSPPPPPPCPAP-RPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRR 270
           RPP P      SP  P PPPP P P RP        R     P       +P +  PP  
Sbjct: 320 RPPPP------SPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSP-------SPPKPPPPPS 366

Query: 269 P*RTPPSRPP*SCAQPSGLP 210
           P   PP RPP    +P   P
Sbjct: 367 PPPRPPRRPPRPPRRPPTAP 386

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 31/97 (31%), Positives = 36/97 (36%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP P   +   P  PPPPPP P+P P          S   P        P    PP  P 
Sbjct: 88  PPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPP-------PPPPPPPPPNP- 139

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
             PP  PP S + P   P S   +  P   P+ P  P
Sbjct: 140 PPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSP 176

 Score = 38.1 bits (87), Expect = 0.055
 Identities = 32/97 (32%), Positives = 32/97 (32%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP P   L  SP SPPPPPP P P P                       P    PP  P 
Sbjct: 74  PPPPQPPLPPSP-SPPPPPPPPVPPP-----------------------PPPPPPPPPPP 109

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
             PP  PP     PS  P        P   P  P PP
Sbjct: 110 SPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPP 146

 Score = 37.7 bits (86), Expect = 0.072
 Identities = 31/97 (31%), Positives = 31/97 (31%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP P       P  PPP PP P P P S                     P    PP  P 
Sbjct: 243 PPRPPPPAPPPPRPPPPSPPPPLPPPPS--------------------PPPPLPPPPSP- 281

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
             PPS PP S   PS  P        P   P  P PP
Sbjct: 282 -PPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPP 317

 Score = 36.2 bits (82), Expect = 0.21
 Identities = 31/97 (31%), Positives = 33/97 (33%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP+P       P  PPPPPP P P P         S S  P        P    PP  P 
Sbjct: 57  PPTPS-----GPEHPPPPPPPPPPPPQ---PPLPPSPSPPPPPPPPVPPPPPPPPPPPPP 108

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
            +PP  PP     P   P        P   P  P PP
Sbjct: 109 PSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPP 145

 Score = 36.2 bits (82), Expect = 0.21
 Identities = 37/107 (34%), Positives = 40/107 (36%), Gaps = 9/107 (8%)
 Frame = -2

Query: 446 RPPSPIRHLLLSPGSPPPPPPC--PAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPR 273
           RPPSP       P   PP PP   P PRP        R     P        P  + PP 
Sbjct: 218 RPPSPSPPSPRPPPRRPPFPPPSPPPPRPPPPAPPPPRPPPPSPPPP---LPPPPSPPPP 274

Query: 272 RP*RTPPSRPP*SCAQPSGLPVS*KAARR-------PRLAPALPLPP 153
            P   PPS PP S   PS LP S +  +        PR  P  P PP
Sbjct: 275 LP--PPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPP 319

 Score = 34.3 bits (77), Expect = 0.80
 Identities = 31/102 (30%), Positives = 37/102 (35%), Gaps = 4/102 (3%)
 Frame = -2

Query: 446 RPP---SPIRHLLLSPGSPPP-PPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAP 279
           +PP   SP+  L+ +P +PPP  PP   P PG    T        P        P    P
Sbjct: 23  KPPPRRSPVVALVETPAAPPPGSPPPGTPPPGVPPPTPSGPEHPPPPPP---PPPPPPQP 79

Query: 278 PRRP*RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
           P  P  +PP  PP     P   P        P   P  P PP
Sbjct: 80  PLPPSPSPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPP 121

>ref|NP_068292.1| PxORF73 peptide [Plutella xylostella granulovirus]
           gi|11036868|gb|AAG27371.1|AF270937_73 PxORF73 peptide
           [Plutella xylostella granulovirus]
          Length = 158

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 35/106 (33%), Positives = 43/106 (40%)
 Frame = -2

Query: 470 VFVFFCFLRPPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPA 291
           +F +FCF+  P  I     +P  P PPPP P P P +  AT   +    P          
Sbjct: 13  LFNYFCFILKPKTIH----TPSPPLPPPPTPPPTPPTSPATPPPTFPPTP---------- 58

Query: 290 RAAPPRRP*RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
              PP  P  TPP  PP +   P  +P     A  P  AP  P PP
Sbjct: 59  PPTPPPTPPPTPPPTPPPTPPPPPIIP-----APSPPTAPPQPPPP 99

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 30/94 (31%), Positives = 34/94 (35%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP PI      P +PP PPP P P P              P       TP    PP  P 
Sbjct: 79  PPPPIIPAPSPPTAPPQPPPPPPPPP-------------PPPPPPPPPTPPPTPPPTPPP 125

Query: 263 RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALP 162
             PP+ PP     P+   V     R P   P+LP
Sbjct: 126 TPPPTPPP----TPNPDAVIPPITRPPLRPPSLP 155

>ref|NP_200624.1| formin homology 2 (FH2) domain-containing protein [Arabidopsis
            thaliana] gi|8777317|dbj|BAA96907.1|
            gb|AAD23008.1~gene_id:MCK7.3~strong similarity to unknown
            protein [Arabidopsis thaliana]
          Length = 1307

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 41/120 (34%), Positives = 51/120 (42%)
 Frame = -2

Query: 443  PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
            PP+PI H    P  PPPPPP   P P S   +A +SS   P A    R P  +A P  P 
Sbjct: 717  PPTPIVHTSSPPPPPPPPPPPAPPTPQSNGISAMKSSPPAPPA--PPRLPTHSASPPPP- 773

Query: 263  RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALPLPPC*LLLSVEKTQDLP*TSPWSWGR 84
             T P  PP    +    P         +L+P+ P        +V  T  LP T P S G+
Sbjct: 774  -TAPPPPPLGQTRAPSAPPPPPPKLGTKLSPSGP--------NVPPTPALP-TGPLSSGK 823

 Score = 37.7 bits (86), Expect = 0.072
 Identities = 31/97 (31%), Positives = 40/97 (40%), Gaps = 2/97 (2%)
 Frame = -2

Query: 446 RPPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPA--RAAPPR 273
           R P PI +    P  P PPPP   P P  + +T  +     P A  A  TP    ++PP 
Sbjct: 672 RSPPPISNSDKKPALPRPPPP--PPPPPMQHSTVTKVPPPPPPAPPAPPTPIVHTSSPPP 729

Query: 272 RP*RTPPSRPP*SCAQPSGLPVS*KAARRPRLAPALP 162
            P   PP  PP    Q +G+     +   P   P LP
Sbjct: 730 PPPPPPPPAPP--TPQSNGISAMKSSPPAPPAPPRLP 764

 Score = 37.4 bits (85), Expect = 0.094
 Identities = 14/23 (60%), Positives = 16/23 (68%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPA 375
           PP P+R  L   G+PPPPPP PA
Sbjct: 534 PPHPVRPQLAQAGAPPPPPPLPA 556

>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
           [Azotobacter vinelandii]
          Length = 1336

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 40/96 (41%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
 Frame = -2

Query: 413 SPGSPPPPPPCPAPRPGSR*ATAGRSSSARP--*AA*AWRTPARAAPPRRP*RTP----- 255
           S GSP  P P PA RP +R  T  RS S  P   +  AWR  AR++PP RP R       
Sbjct: 174 SGGSPHRPAPVPARRPPARARTGSRSPSPPPAGRSPGAWRRTARSSPPPRPCRASVGLRC 233

Query: 254 PSRPP*SCAQPSGL--PVS*KAARRPRLAPALPLPP 153
           PS      A+PS    P+    AR P  AP  P PP
Sbjct: 234 PSAAGPDRARPSDSPPPLPGPVARTPASAP--PGPP 267

>ref|NP_509491.1| putative protein (112.0 kD) (XJ420) [Caenorhabditis elegans]
           gi|7506276|pir||T28872 hypothetical protein R04E5.8 -
           Caenorhabditis elegans gi|9803002|gb|AAG00010.1|
           Hypothetical protein R04E5.8a [Caenorhabditis elegans]
          Length = 997

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
 Frame = -2

Query: 443 PPSPIRHLLLSPGSPPPPPPCPAPRPGSR*ATAGRSSSARP*AA*AWRTPARAAPPRRP* 264
           PP P R       SPPPPPP   PR                        P R+ PPRRP 
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPR----------------------TPPPRSPPPRRPP 161

Query: 263 RTPPS---RPP*SCAQPSGLPVS*KAARRPRLAPALPLPP 153
            TPPS   RPP +   P          R P   P  P+PP
Sbjct: 162 MTPPSPQRRPPRTPPSPE--------PRNPPRTPPSPIPP 193



EST assemble image


clone accession position
1 CM100e02_r AV392860 1 425
2 CM084b09_r AV392593 147 483




Chlamydomonas reinhardtii
Kazusa DNA Research Institute